BLASTX nr result

ID: Bupleurum21_contig00002501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002501
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]   394   e-107
ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis...   394   e-107
ref|XP_002517473.1| structure-specific recognition protein, puta...   390   e-106
ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [...   382   e-104
ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [...   382   e-104

>emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
          Length = 644

 Score =  394 bits (1012), Expect = e-107
 Identities = 196/234 (83%), Positives = 210/234 (89%)
 Frame = -2

Query: 703 MADGHLFNNISLGGRGGTNPGQLRVHSXXXXXXXXXXXXXVEVDKSDISGLTWMKVPRTN 524
           M++GHLFNNISLGGRGGTNPGQLRVH              VEVDKSDI G+TWMKVPRTN
Sbjct: 1   MSEGHLFNNISLGGRGGTNPGQLRVHPGGILWKKQGGGKAVEVDKSDIVGVTWMKVPRTN 60

Query: 523 QLGVLTKEGLKYKFTGFRDQDVTSLTTFFQTSCGITPEEKQLSVSGKNWGEVDLNGNMLS 344
           QLGV  K+GL YKFTGFR+QDVT+LT FFQ SCG+ PEEKQLSVSG+NWGEVDLNGNML+
Sbjct: 61  QLGVRVKDGLYYKFTGFREQDVTNLTNFFQHSCGJNPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 343 FLVGSKQAFEVSLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 164
           FLVGSKQAFEVSLADVSQTQ+QGKNDV+LEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180

Query: 163 GDENCPPAQVFRNKIVSMADVTPGGEEAVVTFEGIAILTPRGRYNVELHLSFLR 2
           GDEN PPAQVFR+KI+SMADV  GGEEAVVTFEGIAILTPRGRY+VELHLSFLR
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLR 234


>ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
           gi|296082859|emb|CBI22160.3| unnamed protein product
           [Vitis vinifera]
          Length = 644

 Score =  394 bits (1011), Expect = e-107
 Identities = 196/234 (83%), Positives = 210/234 (89%)
 Frame = -2

Query: 703 MADGHLFNNISLGGRGGTNPGQLRVHSXXXXXXXXXXXXXVEVDKSDISGLTWMKVPRTN 524
           M++GHLFNNISLGGRGGTNPGQLRVH              VEVDKSDI G+TWMKVPRTN
Sbjct: 1   MSEGHLFNNISLGGRGGTNPGQLRVHPGGILWKKQGGGKAVEVDKSDIVGVTWMKVPRTN 60

Query: 523 QLGVLTKEGLKYKFTGFRDQDVTSLTTFFQTSCGITPEEKQLSVSGKNWGEVDLNGNMLS 344
           QLGV  K+GL YKFTGFR+QDVT+LT FFQ SCG+ PEEKQLSVSG+NWGEVDLNGNML+
Sbjct: 61  QLGVRVKDGLYYKFTGFREQDVTNLTNFFQHSCGLNPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 343 FLVGSKQAFEVSLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 164
           FLVGSKQAFEVSLADVSQTQ+QGKNDV+LEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180

Query: 163 GDENCPPAQVFRNKIVSMADVTPGGEEAVVTFEGIAILTPRGRYNVELHLSFLR 2
           GDEN PPAQVFR+KI+SMADV  GGEEAVVTFEGIAILTPRGRY+VELHLSFLR
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLR 234


>ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
           gi|223543484|gb|EEF45015.1| structure-specific
           recognition protein, putative [Ricinus communis]
          Length = 640

 Score =  390 bits (1002), Expect = e-106
 Identities = 192/234 (82%), Positives = 212/234 (90%)
 Frame = -2

Query: 703 MADGHLFNNISLGGRGGTNPGQLRVHSXXXXXXXXXXXXXVEVDKSDISGLTWMKVPRTN 524
           M DGHLFNNISLGGRGGTNPGQL++HS             VEVDK+DI+GLTWMKVPRTN
Sbjct: 1   MTDGHLFNNISLGGRGGTNPGQLKLHSGGILWKKQGGGKAVEVDKADIAGLTWMKVPRTN 60

Query: 523 QLGVLTKEGLKYKFTGFRDQDVTSLTTFFQTSCGITPEEKQLSVSGKNWGEVDLNGNMLS 344
           QLGV  K+GL YKFTGFRDQD  +LT+FFQ++CGIT EEKQLSVSG+NWGEVDLNGNML+
Sbjct: 61  QLGVRIKDGLFYKFTGFRDQDHANLTSFFQSNCGITLEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 343 FLVGSKQAFEVSLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 164
           FLVGSKQAFEVSLADVSQTQ+QGKNDV+LEFHVDDTTGANEKDSLMEISFHIP++NTQFV
Sbjct: 121 FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPSNNTQFV 180

Query: 163 GDENCPPAQVFRNKIVSMADVTPGGEEAVVTFEGIAILTPRGRYNVELHLSFLR 2
           GDEN PPAQVFR+KI+SMADV PGGEEAVVTF+G+AILTPRGRY+VELHLSFLR
Sbjct: 181 GDENHPPAQVFRDKIMSMADVNPGGEEAVVTFDGVAILTPRGRYSVELHLSFLR 234


>ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 614

 Score =  382 bits (981), Expect = e-104
 Identities = 186/234 (79%), Positives = 208/234 (88%)
 Frame = -2

Query: 703 MADGHLFNNISLGGRGGTNPGQLRVHSXXXXXXXXXXXXXVEVDKSDISGLTWMKVPRTN 524
           M DGHLFNNI+LGGRGGTNPGQ++++              +EVDKSDI G+TWMKVPR+N
Sbjct: 1   MTDGHLFNNITLGGRGGTNPGQIKIYPGGIVWKRQGGGKLIEVDKSDIMGVTWMKVPRSN 60

Query: 523 QLGVLTKEGLKYKFTGFRDQDVTSLTTFFQTSCGITPEEKQLSVSGKNWGEVDLNGNMLS 344
           QLGV  K+GL YKFTGFRDQDV +LT FFQ +CGI+ EEKQLSVSG+NWGEVDLNGNML+
Sbjct: 61  QLGVQIKDGLYYKFTGFRDQDVVTLTNFFQNTCGISVEEKQLSVSGRNWGEVDLNGNMLA 120

Query: 343 FLVGSKQAFEVSLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 164
           F+VGSKQAFEVSLADVSQTQLQGKNDV+LEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
Sbjct: 121 FMVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180

Query: 163 GDENCPPAQVFRNKIVSMADVTPGGEEAVVTFEGIAILTPRGRYNVELHLSFLR 2
           GDEN PPAQVFR+KI+SMADV  GGE+A+VTFEGIAILTPRGRY+VELH+SFLR
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEDAIVTFEGIAILTPRGRYSVELHMSFLR 234


>ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 640

 Score =  382 bits (981), Expect = e-104
 Identities = 187/234 (79%), Positives = 207/234 (88%)
 Frame = -2

Query: 703 MADGHLFNNISLGGRGGTNPGQLRVHSXXXXXXXXXXXXXVEVDKSDISGLTWMKVPRTN 524
           M DGHLFNNI+LGGRGGTNPGQ++++              +EVDKSDI G+TWMKVPR+N
Sbjct: 1   MTDGHLFNNITLGGRGGTNPGQIKIYPGGIIWKRQGGGKLIEVDKSDIMGVTWMKVPRSN 60

Query: 523 QLGVLTKEGLKYKFTGFRDQDVTSLTTFFQTSCGITPEEKQLSVSGKNWGEVDLNGNMLS 344
           QLGV  K+GL YKFTGFRDQDV SLT FFQ +CGI+ EEKQLSVSG+NWGEVDLNGNML+
Sbjct: 61  QLGVQIKDGLYYKFTGFRDQDVVSLTNFFQNTCGISVEEKQLSVSGRNWGEVDLNGNMLA 120

Query: 343 FLVGSKQAFEVSLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 164
           F VGSKQAFEVSLADVSQTQLQGKNDV+LEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
Sbjct: 121 FTVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180

Query: 163 GDENCPPAQVFRNKIVSMADVTPGGEEAVVTFEGIAILTPRGRYNVELHLSFLR 2
           GDEN PPAQVFR+KI+SMADV  GGE+A+VTFEGIAILTPRGRY+VELH+SFLR
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEDAIVTFEGIAILTPRGRYSVELHMSFLR 234