BLASTX nr result

ID: Bupleurum21_contig00001955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001955
         (1327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274167.1| PREDICTED: uncharacterized protein LOC100245...   344   3e-92
ref|XP_002511974.1| DNA binding protein, putative [Ricinus commu...   336   7e-90
ref|NP_001235894.1| MYB transcription factor MYB109 [Glycine max...   321   2e-85
gb|AFK46047.1| unknown [Lotus japonicus]                              312   1e-82
emb|CCA29110.1| putative MYB transcription factor [Rosa hybrid c...   311   2e-82

>ref|XP_002274167.1| PREDICTED: uncharacterized protein LOC100245771 [Vitis vinifera]
          Length = 296

 Score =  344 bits (883), Expect = 3e-92
 Identities = 177/281 (62%), Positives = 202/281 (71%), Gaps = 9/281 (3%)
 Frame = +1

Query: 61  MWSREEEKAFENAIAMHWIEDSKDQWDKIASMVPTKSIEQLHQHYKLLVEDVNAIEAGLV 240
           +WSREEEKAFENAIAMHW ED K+ WDKIASMVP KS+++L QHY+ LVEDVNAIEAG +
Sbjct: 7   VWSREEEKAFENAIAMHWTEDCKEVWDKIASMVPGKSVDELKQHYQFLVEDVNAIEAGHI 66

Query: 241 PVPKYAGEDEXXXXXXXXXXXXTKSNHHHGLTNATN-KRSSCNFSNGFSAFGSDSTCPGS 417
           P+P YA ++             +    HH L +AT+ KRS+C F  GFS  G DS   G 
Sbjct: 67  PLPNYAADEASS----------SSVKDHHALPSATSDKRSNCGFGGGFSGLGHDSAVQGG 116

Query: 418 KASSRLEQERRKGIPWTEEEHRLFLIGLDKFGKGDWRSISRNYVISRTPTQVASHAQKYF 597
           K  SR EQERRKGIPWTEEEHRLFL+GLDKFGKGDWRSISRN+VISRTPTQVASHAQKYF
Sbjct: 117 KGGSRSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYF 176

Query: 598 IRLNSMNRDRRRTSIHDITSVNNGDVSSQHVPITGQQLSSDPSNGMA--VGPPVKH---- 759
           IRLNSMNRDRRR+SIHDITSVNNGDVS+   PITGQQ + +P++  A  VGPP+KH    
Sbjct: 177 IRLNSMNRDRRRSSIHDITSVNNGDVSTPQAPITGQQGNGNPASAAAAGVGPPLKHHRAQ 236

Query: 760 --XXXXXXXXXXXXXXHPVAPGSAQFSSAIGTPVMLPPPIH 876
                           HPVA      +SA+GTPVMLPP  H
Sbjct: 237 PSMPAGALGMYGTPMGHPVAAPPGHMASAVGTPVMLPPGPH 277


>ref|XP_002511974.1| DNA binding protein, putative [Ricinus communis]
           gi|223549154|gb|EEF50643.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 297

 Score =  336 bits (862), Expect = 7e-90
 Identities = 174/285 (61%), Positives = 209/285 (73%), Gaps = 7/285 (2%)
 Frame = +1

Query: 46  DSNSVMWSREEEKAFENAIAMHWIED-SKDQWDKIASMVPTKSIEQLHQHYKLLVEDVNA 222
           +S ++ WSREE+ AFENAIA HWIED S++QW+KIASMVP+++IE+L QHY+LLVEDV+A
Sbjct: 2   ESATITWSREEDIAFENAIATHWIEDDSEEQWEKIASMVPSRNIEELKQHYRLLVEDVDA 61

Query: 223 IEAGLVPVPKYAGEDEXXXXXXXXXXXXTKSNHHHGLTNA--TNKRSSCNFSNGFSAFGS 396
           IEAG VP+P Y GE+             + S   HG + A  T+KR +C F +GF   G 
Sbjct: 62  IEAGNVPLPNYVGEETTS----------SSSKDSHGFSGAVTTDKRLNCGFGSGFMGLGP 111

Query: 397 DSTCPGSKASSRLEQERRKGIPWTEEEHRLFLIGLDKFGKGDWRSISRNYVISRTPTQVA 576
           +S+  G K  SR +QERRKGIPWTEEEHRLFL+GLDKFGKGDWRSISRN+V+SRTPTQVA
Sbjct: 112 NSSGHGGKGGSRADQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVLSRTPTQVA 171

Query: 577 SHAQKYFIRLNSMNRDRRRTSIHDITSVNNGDVSSQHVPITGQQLSSDPSNGM-AVGPPV 753
           SHAQKYFIRLNSMNRDRRR+SIHDITSVNNG+VSS   PITGQQ +++P+ G  A+G  V
Sbjct: 172 SHAQKYFIRLNSMNRDRRRSSIHDITSVNNGEVSSHQAPITGQQGNTNPAAGAPAMGSAV 231

Query: 754 KH---XXXXXXXXXXXXXXHPVAPGSAQFSSAIGTPVMLPPPIHH 879
           KH                 HPVA      +SA+GTPVMLPPP HH
Sbjct: 232 KHRAQHHMPSIGMYGAPVGHPVAAPPGHMASAVGTPVMLPPPGHH 276


>ref|NP_001235894.1| MYB transcription factor MYB109 [Glycine max]
           gi|356511607|ref|XP_003524515.1| PREDICTED:
           uncharacterized protein LOC100812196 [Glycine max]
           gi|110931704|gb|ABH02851.1| MYB transcription factor
           MYB109 [Glycine max]
          Length = 307

 Score =  321 bits (823), Expect = 2e-85
 Identities = 174/289 (60%), Positives = 203/289 (70%), Gaps = 11/289 (3%)
 Frame = +1

Query: 49  SNSVMWSREEEKAFENAIAMHWIEDS-KDQWDKIASMVPTKSIEQLHQHYKLLVEDVNAI 225
           S+  +WS +EEKAFENAIAMHWIE+S K+QW+KIAS VP+KS+E++ QHY++LVEDV+AI
Sbjct: 3   SSGTIWSYDEEKAFENAIAMHWIEESSKEQWEKIASAVPSKSMEEVKQHYQVLVEDVSAI 62

Query: 226 EAGLVPVPKYAGEDEXXXXXXXXXXXXTKSNHH-HGLTNATN--KRSSCNFSNGFSAFGS 396
           EAG +  P YA ++             T SN   HG + AT+  KRS+CN+ +GFS  G 
Sbjct: 63  EAGHISFPNYASDET------------TSSNKDFHGSSKATSSDKRSNCNYGSGFSGLGL 110

Query: 397 DSTCPGSKA---SSRLEQERRKGIPWTEEEHRLFLIGLDKFGKGDWRSISRNYVISRTPT 567
           DST   S     S   EQERRKGIPWTEEEHRLFL+GLDKFGKGDWRSISRN+VISRTPT
Sbjct: 111 DSTTHSSGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPT 170

Query: 568 QVASHAQKYFIRLNSMNRDRRRTSIHDITSVNNGDVSSQHVPITGQQLSSDPSNGMAVGP 747
           QVASHAQKYFIRLNSMNRDRRR+SIHDITSVNNGDV+S   PITG   S+  SN M VG 
Sbjct: 171 QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVASSQAPITGLHSSTISSNTMGVGQ 230

Query: 748 PVKH----XXXXXXXXXXXXXXHPVAPGSAQFSSAIGTPVMLPPPIHHH 882
            +KH                  HPVA      +SA+GTPVMLPP  H H
Sbjct: 231 SLKHRVQGHIPPGLGMYGTPVGHPVAAPPGHMASAVGTPVMLPPGPHPH 279


>gb|AFK46047.1| unknown [Lotus japonicus]
          Length = 309

 Score =  312 bits (799), Expect = 1e-82
 Identities = 168/290 (57%), Positives = 199/290 (68%), Gaps = 13/290 (4%)
 Frame = +1

Query: 49  SNSVMWSREEEKAFENAIAMHWIED---SKDQWDKIASMVPTKSIEQLHQHYKLLVEDVN 219
           S+  +W+ EEEKAFENAIAMHW ++   S++QW+KIAS VP KS+E++ QHY+ LV+DV+
Sbjct: 3   SSGTIWNYEEEKAFENAIAMHWNDEEAESEEQWEKIASEVPNKSMEEVKQHYQALVDDVS 62

Query: 220 AIEAGLVPVPKYAGEDEXXXXXXXXXXXXTKSNHHHGLTNATNKRSSCNFSNGFSAFGSD 399
           AIE GLVP P Y  E+              K  H    +N+++KRSSCNF +GFS  G D
Sbjct: 63  AIEGGLVPFPNYVAEETTSS---------NKDFHGSHKSNSSDKRSSCNFGSGFSGLGHD 113

Query: 400 STCPGSKAS--SRLEQERRKGIPWTEEEHRLFLIGLDKFGKGDWRSISRNYVISRTPTQV 573
           S     K S     EQER+KGIPWTEEEHRLFL+GLDKFGKGDWRSISRN+VISRTPTQV
Sbjct: 114 SATHSGKGSLSRSSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQV 173

Query: 574 ASHAQKYFIRLNSMNRDRRRTSIHDITSVNNGDVSSQHVPITGQQLSSDPSN--GMAVGP 747
           ASHAQKYFIRLNSMNRDRRR+SIHDITSVNNGDV+S   PITGQ  S+ P +  G+ VG 
Sbjct: 174 ASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVASNQAPITGQHGSTIPPSTMGVGVGH 233

Query: 748 PVK-----HXXXXXXXXXXXXXXHP-VAPGSAQFSSAIGTPVMLPPPIHH 879
            +K     H              HP VA      +SA+GTPVMLPP  HH
Sbjct: 234 SLKHRVQPHHIPGGLGMYGTPVGHPVVAAPPGHMASAVGTPVMLPPGHHH 283


>emb|CCA29110.1| putative MYB transcription factor [Rosa hybrid cultivar]
          Length = 302

 Score =  311 bits (797), Expect = 2e-82
 Identities = 165/281 (58%), Positives = 197/281 (70%), Gaps = 9/281 (3%)
 Frame = +1

Query: 64  WSREEEKAFENAIAMHWIEDSKDQ-WDKIASMVPTKSIEQLHQHYKLLVEDVNAIEAGLV 240
           W+REE+K FENAIA+HWIED ++  WDKIAS+VP+KS+E+L +HY++LVEDV+AI +G +
Sbjct: 4   WTREEDKTFENAIALHWIEDDEESSWDKIASLVPSKSMEELKRHYQMLVEDVSAIVSGNI 63

Query: 241 PVPKYAGEDEXXXXXXXXXXXXTKSNHHHGLTNATNKRSSCNFSNG--FSAFGSDSTCPG 414
           PVP Y GE+               S+        ++KR S    NG  FSA G DS+  G
Sbjct: 64  PVPNYGGEEATTSVSKESSSARASSS------GVSDKRLSSGHGNGGGFSALGHDSSGHG 117

Query: 415 SKASSRLEQERRKGIPWTEEEHRLFLIGLDKFGKGDWRSISRNYVISRTPTQVASHAQKY 594
           SK  SR +QER+KGIPWTEEEHRLFL+GLDKFGKGDWRSISRN+VISRTPTQVASHAQKY
Sbjct: 118 SKGGSRSDQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 177

Query: 595 FIRLNSMNRDRRRTSIHDITSVNN-GDVSSQHVPITGQQLSSDPSNGMAVGPP-VKH--- 759
           FIRLNSMNRDRRR+SIHDITSVNN GDV S   PITGQQ ++   +  A+GPP VKH   
Sbjct: 178 FIRLNSMNRDRRRSSIHDITSVNNGGDVPSHQAPITGQQSNAYAPSAAAIGPPSVKHRPH 237

Query: 760 -XXXXXXXXXXXXXXHPVAPGSAQFSSAIGTPVMLPPPIHH 879
                          HPV+      +SA+GTPVMLPP  HH
Sbjct: 238 QPHMAGLGMYGAPMGHPVSAPPGHMASAVGTPVMLPPAGHH 278


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