BLASTX nr result

ID: Bupleurum21_contig00001953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001953
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24131.3| unnamed protein product [Vitis vinifera]              550   e-154
ref|XP_002265699.1| PREDICTED: general transcription factor 3C p...   530   e-148
ref|XP_003540640.1| PREDICTED: general transcription factor 3C p...   484   e-134
ref|XP_003538968.1| PREDICTED: general transcription factor 3C p...   473   e-131
ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medic...   448   e-123

>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  550 bits (1416), Expect = e-154
 Identities = 271/396 (68%), Positives = 317/396 (80%), Gaps = 4/396 (1%)
 Frame = +1

Query: 1    VDTIYPCVRKS-FLEAMQQKD--RAKKRLTRSVLFERMKVLGNRQNDNVFQGFRPMASAT 171
            VD I+P VR+S F+E ++QK   R KKRL++SVLFER+KVL +  +DNVF GFRPMAS +
Sbjct: 519  VDAIFPLVRESLFVETLKQKVTVRVKKRLSKSVLFERVKVLDDHHSDNVFHGFRPMASTS 578

Query: 172  DLSKATXXXXXXXXXXXXXXXXXXXXXXXGVEWKSDDSDDELPQTSKRRH-LPNLLKDEE 348
            DLSKA+                       GV+W SD+SDDE P+   R   LPNLLKDEE
Sbjct: 579  DLSKASRAKKLLQKKATRKEERKAAAMAAGVDWYSDESDDESPEQKLREPPLPNLLKDEE 638

Query: 349  YHCLIVDLCKALASLRKYWEALEIINLSLKLAYSALSVEKKEELRSLGAQIAYNIGDPSH 528
            +H LI+DLCKALASLRKYWEAL+IINL+L+LAY+ + +EKKEELRSLGAQIAYNI DP H
Sbjct: 639  HHHLILDLCKALASLRKYWEALDIINLTLRLAYNIMPIEKKEELRSLGAQIAYNITDPKH 698

Query: 529  GWECARYIVNQHPYSFAAWNCYYKVISRFDNKYSKHGKFLHGMRTKHRDSVPPIIIFAHQ 708
            G++  +YIV QHP+S AAWNCYYKVISR +N+YSKH K LH MR +H+D VPPI+IF HQ
Sbjct: 699  GFDYVKYIVQQHPHSLAAWNCYYKVISRLENRYSKHSKLLHSMRVRHKDCVPPIVIFGHQ 758

Query: 709  LTMISQHQAAAKEYLEAHKLMPDSPLINLCAGSALINLALGHRLQNKHQCVVQGLAFLFK 888
             TMISQHQ AAKEYLEA+KLMP++PLINLCAG+ALIN+ALG RLQNKHQC+ QGLAFL+ 
Sbjct: 759  FTMISQHQIAAKEYLEAYKLMPENPLINLCAGTALINIALGFRLQNKHQCLAQGLAFLYN 818

Query: 889  NLLLSENSQEALYNIARAYHHIGLVTLAAEYYEKVLSVHVDDYPIPKLPNENPDFTDSLK 1068
            NL L ENSQEALYNIARAYHH+GLV+LA  YYEKVL+ H  DYPIP+LP EN D  ++ K
Sbjct: 819  NLRLCENSQEALYNIARAYHHVGLVSLAVTYYEKVLATHERDYPIPRLPYENTDLVENRK 878

Query: 1069 PGYCDLRREAAYNLHLIYKNSGAFDLARQVLKDHCS 1176
            PGYCDLRREAAYNLHLIYK SGA DLARQVLKDHC+
Sbjct: 879  PGYCDLRREAAYNLHLIYKKSGALDLARQVLKDHCT 914


>ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like [Vitis
            vinifera]
          Length = 1110

 Score =  530 bits (1366), Expect = e-148
 Identities = 262/393 (66%), Positives = 308/393 (78%), Gaps = 1/393 (0%)
 Frame = +1

Query: 1    VDTIYPCVRKS-FLEAMQQKDRAKKRLTRSVLFERMKVLGNRQNDNVFQGFRPMASATDL 177
            VD I+P VR+S F+E ++QK R KKRL++SVLFER+KVL +  +DNVF GFRPMAS +DL
Sbjct: 732  VDAIFPLVRESLFVETLKQKVRVKKRLSKSVLFERVKVLDDHHSDNVFHGFRPMASTSDL 791

Query: 178  SKATXXXXXXXXXXXXXXXXXXXXXXXGVEWKSDDSDDELPQTSKRRHLPNLLKDEEYHC 357
            SKA+                           K +     + Q  +   LPNLLKDEE+H 
Sbjct: 792  SKASRAKKLLQKKATR---------------KEERKAAAMEQKLREPPLPNLLKDEEHHH 836

Query: 358  LIVDLCKALASLRKYWEALEIINLSLKLAYSALSVEKKEELRSLGAQIAYNIGDPSHGWE 537
            LI+DLCKALASLRKYWEAL+IINL+L+LAY+ + +EKKEELRSLGAQIAYNI DP HG++
Sbjct: 837  LILDLCKALASLRKYWEALDIINLTLRLAYNIMPIEKKEELRSLGAQIAYNITDPKHGFD 896

Query: 538  CARYIVNQHPYSFAAWNCYYKVISRFDNKYSKHGKFLHGMRTKHRDSVPPIIIFAHQLTM 717
              +YIV QHP+S AAWNCYYKVISR +N+YSKH K LH MR +H+D VPPI+IF HQ TM
Sbjct: 897  YVKYIVQQHPHSLAAWNCYYKVISRLENRYSKHSKLLHSMRVRHKDCVPPIVIFGHQFTM 956

Query: 718  ISQHQAAAKEYLEAHKLMPDSPLINLCAGSALINLALGHRLQNKHQCVVQGLAFLFKNLL 897
            ISQHQ AAKEYLEA+KLMP++PLINLCAG+ALIN+ALG RLQNKHQC+ QGLAFL+ NL 
Sbjct: 957  ISQHQIAAKEYLEAYKLMPENPLINLCAGTALINIALGFRLQNKHQCLAQGLAFLYNNLR 1016

Query: 898  LSENSQEALYNIARAYHHIGLVTLAAEYYEKVLSVHVDDYPIPKLPNENPDFTDSLKPGY 1077
            L ENSQEALYNIARAYHH+GLV+LA  YYEKVL+ H  DYPIP+LP EN D  ++ KPGY
Sbjct: 1017 LCENSQEALYNIARAYHHVGLVSLAVTYYEKVLATHERDYPIPRLPYENTDLVENRKPGY 1076

Query: 1078 CDLRREAAYNLHLIYKNSGAFDLARQVLKDHCS 1176
            CDLRREAAYNLHLIYK SGA DLARQVLKDHC+
Sbjct: 1077 CDLRREAAYNLHLIYKKSGALDLARQVLKDHCT 1109


>ref|XP_003540640.1| PREDICTED: general transcription factor 3C polypeptide 3-like
            [Glycine max]
          Length = 919

 Score =  484 bits (1247), Expect = e-134
 Identities = 240/398 (60%), Positives = 303/398 (76%), Gaps = 6/398 (1%)
 Frame = +1

Query: 1    VDTIYPCVRKS-FLEAMQQKDRAKKRLTRSVLFERMKVLGNRQNDNVFQGFRPMASATDL 177
            VDTI+P VR+S ++  ++QK ++KKRL++  L ER++VL   + DNVF+GFRP+A+ +DL
Sbjct: 531  VDTIFPLVRESLYVATLRQKGKSKKRLSKRDLVERVRVLDGPEKDNVFRGFRPVAAPSDL 590

Query: 178  SKATXXXXXXXXXXXXXXXXXXXXXXXGVEWKSDDSDDELPQTSKRRHLPNLLKDEEYHC 357
             KA+                       G++W  +          +   L NLLKDEE+H 
Sbjct: 591  LKASRAKKLLQKKAMEKEKRKAEALASGIDWLKN----------REPPLCNLLKDEEHHQ 640

Query: 358  LIVDLCKALASLRKYWEALEIINLSLKLAYSALSVEKKEELRSLGAQIAYNIGDPSHGWE 537
            LI+DLCKALASL++YWEALEIINLSL+LA+++LS EKKEELRSLGAQ+AYN  DP HG++
Sbjct: 641  LIIDLCKALASLQRYWEALEIINLSLRLAHTSLSTEKKEELRSLGAQMAYNTTDPKHGFD 700

Query: 538  CARYIVNQHPYSFAAWNCYYKVISRFDNKYSKHGKFLHGMRTKHRDSVPPIIIFAHQLTM 717
            C +YIV QHP+  AAWNCYYKVISR +N+ ++H KF+ GM+ K  D VPPI+I  HQ T+
Sbjct: 701  CVKYIVQQHPHGVAAWNCYYKVISRLENRDTRHYKFVRGMQGKFVDCVPPILISGHQFTI 760

Query: 718  ISQHQAAAKEYLEAHKLMPDSPLINLCAGSALINLALGHRLQNKHQCVVQGLAFLFKNLL 897
             S HQ AA++YLEA+KL+P++PL+NLC G+ALINLALG RLQNKHQCVVQGLAFL+ N+ 
Sbjct: 761  CSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGFRLQNKHQCVVQGLAFLYNNMR 820

Query: 898  LSENS-----QEALYNIARAYHHIGLVTLAAEYYEKVLSVHVDDYPIPKLPNENPDFTDS 1062
            + ENS     QE+LYNIARA+HH+GLVTLAA YYEKV+++   DYPIPKLPNENPD  ++
Sbjct: 821  ICENSQVFFLQESLYNIARAFHHVGLVTLAAFYYEKVIAICEKDYPIPKLPNENPDSIET 880

Query: 1063 LKPGYCDLRREAAYNLHLIYKNSGAFDLARQVLKDHCS 1176
             KPGYCDLRREAAYNLHLIYK SGA DLARQVLKDHC+
Sbjct: 881  HKPGYCDLRREAAYNLHLIYKKSGALDLARQVLKDHCT 918


>ref|XP_003538968.1| PREDICTED: general transcription factor 3C polypeptide 3-like
            [Glycine max]
          Length = 929

 Score =  473 bits (1218), Expect = e-131
 Identities = 236/399 (59%), Positives = 300/399 (75%), Gaps = 7/399 (1%)
 Frame = +1

Query: 1    VDTIYPCVRKS-FLEAMQQKDRAKKRLTRSVLFERMKVLGNRQNDNVFQGFRPMASATDL 177
            VDTI+P +R+S ++   +QK ++KKRL++  L ER++VL   + DNVF+GFRP+A+ +DL
Sbjct: 540  VDTIFPLIRESLYVATCRQKGKSKKRLSKRDLVERVRVLDGPEKDNVFRGFRPVAAPSDL 599

Query: 178  SKATXXXXXXXXXXXXXXXXXXXXXXXGVEWKSDDSDDELPQTSKRRHLPNLLKDEEYHC 357
             KA+                       G++W  +          +   L NLLKDEE+H 
Sbjct: 600  LKASRAKKLLQKKAIEKEKRKAEALASGIDWLKN----------REPPLCNLLKDEEHHQ 649

Query: 358  LIVDLCKALASLRKYWEALEIINLSLKLAYSALSVEKKEELRSLGAQIAYNIGDPSHGWE 537
            LI+DLCKALASL++YWEALEIINL L+LA+++LS EKKEELRSLGAQ+AYN  DP HG++
Sbjct: 650  LIIDLCKALASLQRYWEALEIINLFLRLAHTSLSTEKKEELRSLGAQMAYNTTDPKHGFD 709

Query: 538  CARYIVNQHPYSFAAWNCYYKVISRFDNKYSKHGKFLHGMRTKHRDSVPPIIIFAHQLTM 717
            C +YIV QHP+S AAWNCYYKVISR +N+ ++H KF+ GM+ K  D VPPI+I  HQ T+
Sbjct: 710  CVKYIVQQHPHSVAAWNCYYKVISRLENRDTRHYKFVRGMQGKFVDCVPPILISGHQFTI 769

Query: 718  ISQHQAAAKEYLEAHKLMPDSPLINLCAGSALINLALGHRLQNKHQCVVQGLAFLFKNLL 897
             S HQ AA++YLEA+KL+P++PL+NLC G+ALINLALG RLQNKHQCVVQGLAFL+ NL 
Sbjct: 770  CSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGLRLQNKHQCVVQGLAFLYNNLR 829

Query: 898  LSENS------QEALYNIARAYHHIGLVTLAAEYYEKVLSVHVDDYPIPKLPNENPDFTD 1059
            + ENS      QE+LYNIARA+HH+GLVTLA  YYEKV+++   DYPIPKLPNEN D  +
Sbjct: 830  ICENSQQLIFLQESLYNIARAFHHVGLVTLAVIYYEKVIAMCERDYPIPKLPNENSDIIE 889

Query: 1060 SLKPGYCDLRREAAYNLHLIYKNSGAFDLARQVLKDHCS 1176
            + KPGYCDLRREAAYNLHLIYK SGA DLARQVL+D+C+
Sbjct: 890  THKPGYCDLRREAAYNLHLIYKKSGALDLARQVLRDYCT 928


>ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
            gi|355508598|gb|AES89740.1| Transcription factor tau
            subunit sfc4 [Medicago truncatula]
          Length = 937

 Score =  448 bits (1152), Expect = e-123
 Identities = 223/393 (56%), Positives = 292/393 (74%), Gaps = 1/393 (0%)
 Frame = +1

Query: 1    VDTIYPCVRKSF-LEAMQQKDRAKKRLTRSVLFERMKVLGNRQNDNVFQGFRPMASATDL 177
            V+   P V +S  + A ++K ++K+RL+   L +R++VL   + ++VF+GFRP+ S++DL
Sbjct: 544  VNVSLPLVHESLHVPAPRRKGQSKRRLSIRDLEKRVRVLNVPETNSVFRGFRPITSSSDL 603

Query: 178  SKATXXXXXXXXXXXXXXXXXXXXXXXGVEWKSDDSDDELPQTSKRRHLPNLLKDEEYHC 357
            SKA+                       G++W SDDSDDE  + +    L NL KDE YH 
Sbjct: 604  SKASRAKKLLLKKAIEKERKKAEAVASGIDWLSDDSDDEPQEPNTDSPLCNLHKDEGYHQ 663

Query: 358  LIVDLCKALASLRKYWEALEIINLSLKLAYSALSVEKKEELRSLGAQIAYNIGDPSHGWE 537
            LI+DLC ALASL++Y EALEIINL+L+LA+++LS EK E+LRSL  Q+AYN  DP  G++
Sbjct: 664  LIIDLCNALASLQRYSEALEIINLTLRLAHTSLSTEKNEKLRSLEVQMAYNTTDPKQGFD 723

Query: 538  CARYIVNQHPYSFAAWNCYYKVISRFDNKYSKHGKFLHGMRTKHRDSVPPIIIFAHQLTM 717
            C + +V QH +S AAWNCYYKV+SR +N+ ++H KFL  M+ K  D VPPI+I AHQ T+
Sbjct: 724  CVKDMVQQHAHSVAAWNCYYKVVSRLENRDTRHDKFLRSMQGKFVDCVPPILISAHQFTL 783

Query: 718  ISQHQAAAKEYLEAHKLMPDSPLINLCAGSALINLALGHRLQNKHQCVVQGLAFLFKNLL 897
             S HQ AA++YLEA+KL+P++PL+NLC G+AL+NLALG RL NKHQC+VQGLAFL+ NL 
Sbjct: 784  CSHHQDAARKYLEAYKLLPENPLVNLCVGTALVNLALGFRLHNKHQCIVQGLAFLYNNLE 843

Query: 898  LSENSQEALYNIARAYHHIGLVTLAAEYYEKVLSVHVDDYPIPKLPNENPDFTDSLKPGY 1077
            +  NSQE+LYNIARAYHH+GLVTLAA YYEKV+++   DYPIPKL NE+ D  ++ KPGY
Sbjct: 844  ICTNSQESLYNIARAYHHVGLVTLAAIYYEKVIAIRERDYPIPKLQNESIDVIENHKPGY 903

Query: 1078 CDLRREAAYNLHLIYKNSGAFDLARQVLKDHCS 1176
            C+LRREAAYNLHLIYK SGA DLARQVLKD+CS
Sbjct: 904  CNLRREAAYNLHLIYKRSGALDLARQVLKDYCS 936


Top