BLASTX nr result

ID: Bupleurum21_contig00001952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001952
         (2632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331165.1| predicted protein [Populus trichocarpa] gi|2...   288   7e-75
ref|XP_002284247.1| PREDICTED: uncharacterized protein LOC100250...   270   1e-69
ref|XP_004142517.1| PREDICTED: uncharacterized protein LOC101209...   232   4e-58
ref|XP_004142516.1| PREDICTED: uncharacterized protein LOC101209...   231   6e-58
ref|XP_002514277.1| conserved hypothetical protein [Ricinus comm...   227   1e-56

>ref|XP_002331165.1| predicted protein [Populus trichocarpa] gi|222873248|gb|EEF10379.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  288 bits (736), Expect = 7e-75
 Identities = 152/307 (49%), Positives = 178/307 (57%), Gaps = 8/307 (2%)
 Frame = +3

Query: 1539 SVSGYRMRAGSASPVRRRTADRHYSPEFDHXXXXXXXXXXXXXXXXXXYREQSPP---SX 1709
            S  GYR+RAGS SPVRRR ADR YS +FD+                  +R+ SPP     
Sbjct: 27   SDGGYRLRAGSGSPVRRRDADRRYSSDFDNSGAPPRGRDFSNGRDRGRFRDSSPPYARGR 86

Query: 1710 XXXXXXXXXXXXXXXXXXXXXXXXXXXNSPNVRPREGDWICSDPRCNNLNFARREFCNNC 1889
                                       N+PNVRPREGDWICSDP C NLNFARRE+CNNC
Sbjct: 87   GGGRPLGRGFDGPGFGPGPLRGEGVSRNNPNVRPREGDWICSDPLCGNLNFARREYCNNC 146

Query: 1890 KRPRYDPGRSPRRGYAGFLPPLS--RRLPGPALDRSPGRPISGYRSPPRNWGRNGHRDFG 2063
            KRPRY PG SPRRGY G  PP +  RR PGP LD SPGR ++GYRSPPR W R+G RDFG
Sbjct: 147  KRPRYRPGGSPRRGYPGPPPPHAPPRRFPGPPLDLSPGRTMNGYRSPPRGWSRDGPRDFG 206

Query: 2064 FGGPTNRRREGHFSDHQIRRDRPHYLEDNXXXXXXXXXXVPLDW-ERDNGRDMLSN-RKG 2237
             GGP   R+ G FSDH +RR+R  Y +D           +P+DW  +D GRD L N RKG
Sbjct: 207  PGGPPPPRQGGRFSDHDMRRERSDYPDDEYRVRNKFDRPMPMDWGHKDRGRDGLFNERKG 266

Query: 2238 YERRXXXXXXXXXXXXHRGHWPRDMRERSRSPARDL-PPLDYRRDVYMERERDDRRAIGH 2414
            +ERR             RG W RD R+RSRSP R   PP ++R+D+YMER RDDR  +G 
Sbjct: 267  FERRPPSPPLPPPSLPQRGRWGRDGRDRSRSPIRGAPPPKEFRQDMYMERGRDDRHPVGR 326

Query: 2415 DRVEDAY 2435
            DR+   Y
Sbjct: 327  DRMRHVY 333


>ref|XP_002284247.1| PREDICTED: uncharacterized protein LOC100250827 [Vitis vinifera]
          Length = 360

 Score =  270 bits (690), Expect = 1e-69
 Identities = 149/308 (48%), Positives = 168/308 (54%), Gaps = 8/308 (2%)
 Frame = +3

Query: 1536 GSVSGYRMRAGSASPVRRRTADRHYSPEFDHXXXXXXXXXXXXXXXXXXYREQSPP--SX 1709
            G   GYR+RAGS+SPVRRR  D  Y+ EFDH                  YR  SPP    
Sbjct: 55   GDGPGYRIRAGSSSPVRRRNPDHRYNSEFDHSGGLPRSRGFGSERDPGRYRNHSPPYGRG 114

Query: 1710 XXXXXXXXXXXXXXXXXXXXXXXXXXXNSPNVRPREGDWICSDPRCNNLNFARREFCNNC 1889
                                       N+PNVRPREGDW+C DP C NLNFARRE CNNC
Sbjct: 115  RGGGRSFGRGLDGPGFGPGPIRSEGIRNNPNVRPREGDWVCPDPLCGNLNFARREQCNNC 174

Query: 1890 KRPRYDPGRSPRRGYAGFLPPLS--RRLPGPALDRSPGRPISGYRSPPRNWGRNGHRDFG 2063
             R R  PG SPRRG+ G  PP    RR  GP +DRSPGR ++GYRSPPR W R+G R+FG
Sbjct: 175  NRYREGPGESPRRGFPGPPPPHPPPRRFSGPPMDRSPGRTMNGYRSPPRGWARDGPREFG 234

Query: 2064 FGGPTNRRREGHFSDHQIRRDRPHYLEDNXXXXXXXXXXVPLDW-ERDNGRDMLSN--RK 2234
             G P++RR +G F DH +RRDR  Y ED+           P DW  RD GRD   N  RK
Sbjct: 235  GGAPSHRRHDGRFPDHNMRRDRLDYPEDDYRERNKFDRPAPPDWGHRDRGRDSFFNNERK 294

Query: 2235 GYERRXXXXXXXXXXXXHRGHWPRDMRERSRSPARDLPPL-DYRRDVYMERERDDRRAIG 2411
            GYERR             RG W RD+R RSRSP R  PPL DYRRD+YM R RDDR  I 
Sbjct: 295  GYERRPPSPPPPPLPP--RGRWGRDVRARSRSPVRGGPPLKDYRRDMYMGRGRDDRHGIR 352

Query: 2412 HDRVEDAY 2435
             DR  + Y
Sbjct: 353  RDRFGEPY 360



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 33/48 (68%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
 Frame = +1

Query: 85  MGLREKDPAMPHQPLLSSLVVRPTDTDGG--GGSDYEPGEVRRDPPPY 222
           MG R+KD   PHQPLLSSLV+RP+D+ GG  GGSDYEPGE+RR+ P Y
Sbjct: 1   MGSRDKDQTAPHQPLLSSLVIRPSDSSGGGTGGSDYEPGELRREAPHY 48


>ref|XP_004142517.1| PREDICTED: uncharacterized protein LOC101209122 isoform 2 [Cucumis
            sativus] gi|449519505|ref|XP_004166775.1| PREDICTED:
            uncharacterized protein LOC101228947 isoform 2 [Cucumis
            sativus]
          Length = 365

 Score =  232 bits (591), Expect = 4e-58
 Identities = 140/318 (44%), Positives = 166/318 (52%), Gaps = 26/318 (8%)
 Frame = +3

Query: 1545 SGYRMRAGSASPVRRRTADRHYSPEFDHXXXXXXXXXXXXXXXXXXYREQSPP--SXXXX 1718
            +GYR+ AGS SP RRR   R+ S  FDH                  YR+ SP        
Sbjct: 49   AGYRIHAGSVSPPRRRDVHRYVS-NFDHSEGLTRGREFGGGRDLDRYRDTSPHYGRRVSG 107

Query: 1719 XXXXXXXXXXXXXXXXXXXXXXXXNSPNVRPREGDWICSDPRCNNLNFARREFCNNCKRP 1898
                                    N+PNVRPR+GDW CSDP C+NLNFARREFCNNC RP
Sbjct: 108  GRPFGRGVDGPRLAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRP 167

Query: 1899 RYDPGRSPRRGYAGFLPPL----SRRLPGPALDRSPGRPISGYRSPPRNWGRNGHRDFGF 2066
            R   G SPRRGYAG  PP      RR     ++RSPGR ++ YRSPPR+W R+G R+   
Sbjct: 168  RTGGGGSPRRGYAG--PPSLHSPPRRFAAHPIERSPGRTLNEYRSPPRSWARDGSREMAA 225

Query: 2067 GGPTNRRREGHFSDHQIRRDRPHYLEDNXXXXXXXXXXVP-LDWE-RDNGR-DMLSNRKG 2237
            GG    R E  +SDH +RRDR  YLED+          +P  DW  RDNGR D ++ RKG
Sbjct: 226  GGLAPPRYESRYSDH-LRRDRVDYLEDSFRGRSKFDRPLPSADWALRDNGRDDFITERKG 284

Query: 2238 YERRXXXXXXXXXXXXHRGHWPRDMRERSRSPAR-----------------DLPPLDYRR 2366
            +ERR             RG W RD+R+RSRSP R                  LPP D+RR
Sbjct: 285  FERR--PPSPPLPLLPQRGRWSRDVRDRSRSPIRGPIRSPLRVPLRSPLSSGLPPKDFRR 342

Query: 2367 DVYMERERDDRRAIGHDR 2420
            DV+ ERERDDRR +G DR
Sbjct: 343  DVFGERERDDRRGLGRDR 360


>ref|XP_004142516.1| PREDICTED: uncharacterized protein LOC101209122 isoform 1 [Cucumis
            sativus] gi|449519503|ref|XP_004166774.1| PREDICTED:
            uncharacterized protein LOC101228947 isoform 1 [Cucumis
            sativus]
          Length = 385

 Score =  231 bits (590), Expect = 6e-58
 Identities = 140/317 (44%), Positives = 165/317 (52%), Gaps = 26/317 (8%)
 Frame = +3

Query: 1548 GYRMRAGSASPVRRRTADRHYSPEFDHXXXXXXXXXXXXXXXXXXYREQSPP--SXXXXX 1721
            GYR+ AGS SP RRR   R+ S  FDH                  YR+ SP         
Sbjct: 70   GYRIHAGSVSPPRRRDVHRYVS-NFDHSEGLTRGREFGGGRDLDRYRDTSPHYGRRVSGG 128

Query: 1722 XXXXXXXXXXXXXXXXXXXXXXXNSPNVRPREGDWICSDPRCNNLNFARREFCNNCKRPR 1901
                                   N+PNVRPR+GDW CSDP C+NLNFARREFCNNC RPR
Sbjct: 129  RPFGRGVDGPRLAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPR 188

Query: 1902 YDPGRSPRRGYAGFLPPL----SRRLPGPALDRSPGRPISGYRSPPRNWGRNGHRDFGFG 2069
               G SPRRGYAG  PP      RR     ++RSPGR ++ YRSPPR+W R+G R+   G
Sbjct: 189  TGGGGSPRRGYAG--PPSLHSPPRRFAAHPIERSPGRTLNEYRSPPRSWARDGSREMAAG 246

Query: 2070 GPTNRRREGHFSDHQIRRDRPHYLEDNXXXXXXXXXXVP-LDWE-RDNGR-DMLSNRKGY 2240
            G    R E  +SDH +RRDR  YLED+          +P  DW  RDNGR D ++ RKG+
Sbjct: 247  GLAPPRYESRYSDH-LRRDRVDYLEDSFRGRSKFDRPLPSADWALRDNGRDDFITERKGF 305

Query: 2241 ERRXXXXXXXXXXXXHRGHWPRDMRERSRSPAR-----------------DLPPLDYRRD 2369
            ERR             RG W RD+R+RSRSP R                  LPP D+RRD
Sbjct: 306  ERR--PPSPPLPLLPQRGRWSRDVRDRSRSPIRGPIRSPLRVPLRSPLSSGLPPKDFRRD 363

Query: 2370 VYMERERDDRRAIGHDR 2420
            V+ ERERDDRR +G DR
Sbjct: 364  VFGERERDDRRGLGRDR 380



 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 13/59 (22%)
 Frame = +1

Query: 85  MGLREKDPAMPHQPLLSSLVVRPTDTDGGG-------------GSDYEPGEVRRDPPPY 222
           MG R+KD    HQPLLSSLVVRP+++DGGG             G+DYE GEV RDPP Y
Sbjct: 1   MGSRDKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGTDYEAGEVPRDPPQY 59


>ref|XP_002514277.1| conserved hypothetical protein [Ricinus communis]
            gi|223546733|gb|EEF48231.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 346

 Score =  227 bits (579), Expect = 1e-56
 Identities = 119/242 (49%), Positives = 138/242 (57%), Gaps = 8/242 (3%)
 Frame = +3

Query: 1548 GYRMRAGSASPVRRRTADRHYSPEFDHXXXXXXXXXXXXXXXXXXYREQSPP---SXXXX 1718
            GYR+ AGS SP RRR AD  Y+ ++DH                  +R+ SPP        
Sbjct: 67   GYRIHAGSVSPARRRDADHRYNSDYDHSGGPPRGREFGSGRDSGRFRDSSPPYARGRVGG 126

Query: 1719 XXXXXXXXXXXXXXXXXXXXXXXXNSPNVRPREGDWICSDPRCNNLNFARREFCNNCKRP 1898
                                    N+PNVRPREGDWICSDP CNNLNFARRE+CNNCKRP
Sbjct: 127  RPPGRGFDGPGFGPGPLRGEGMGRNNPNVRPREGDWICSDPLCNNLNFARREYCNNCKRP 186

Query: 1899 RYDPGRSPRRGYAGFLPP---LSRRLPGPALDRSPGRPISGYRSPPRNWGRNGHRDFGFG 2069
            RY PG SPRRGY G  PP     RR PGP LD SPGR ++G+RSPPR W R+G RDFG G
Sbjct: 187  RYGPGGSPRRGYPG--PPHPHPPRRFPGPPLDISPGRTMNGFRSPPRGWARDGPRDFGPG 244

Query: 2070 GPTNRRREGHFSDHQIRRDRPHYLEDNXXXXXXXXXXVPLDW-ERDNGRD-MLSNRKGYE 2243
            GP   R  G FSDH IRR RP + ED           +P++W  RD GRD +  +RKG+E
Sbjct: 245  GPPPPRHGGRFSDHDIRRGRPDFPEDEYRGRNKFDRPMPMEWGHRDRGRDNVFHDRKGFE 304

Query: 2244 RR 2249
            RR
Sbjct: 305  RR 306



 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 36/56 (64%), Positives = 40/56 (71%), Gaps = 10/56 (17%)
 Frame = +1

Query: 85  MGLREKDPAMPH-QPLLSSLVVRPTDTDGG---------GGSDYEPGEVRRDPPPY 222
           MG R+KD    H QPLLSSLVVRP+ +DGG         GGSDYEPGEVRR+PPPY
Sbjct: 1   MGSRDKDQTTSHHQPLLSSLVVRPSVSDGGDGGAGGRGGGGSDYEPGEVRREPPPY 56


Top