BLASTX nr result

ID: Bupleurum21_contig00001936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001936
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|2...   325   8e-87
ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|2...   323   3e-86
ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   321   9e-86
ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   321   9e-86
sp|P46942.1|DB10_NICSY RecName: Full=ATP-dependent RNA helicase-...   321   9e-86

>ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|222847303|gb|EEE84850.1|
           predicted protein [Populus trichocarpa]
          Length = 791

 Score =  325 bits (832), Expect = 8e-87
 Identities = 161/182 (88%), Positives = 175/182 (96%)
 Frame = -1

Query: 752 KIAADLLVNPVQVNIGNVDELVANKSITQHVEIVSPMEKQRRVEQIVRSQEPGSKIIIFC 573
           KIAADLLVNPVQVNIGNVDELVANKSITQ+VE+++P+EK RR+EQI+RSQE GSKIIIFC
Sbjct: 358 KIAADLLVNPVQVNIGNVDELVANKSITQYVELLAPLEKHRRLEQILRSQESGSKIIIFC 417

Query: 572 STKKMCDQLSRSLSRQFGTAAIHGDKSQGERDYVLNQFRTGRCPVLVATDVAARGLDIKD 393
           STKKMCDQLSR+L+RQFG AAIHGDKSQ ERDYVL+QFRTGR P+LVATDVAARGLDIKD
Sbjct: 418 STKKMCDQLSRNLTRQFGAAAIHGDKSQSERDYVLSQFRTGRSPILVATDVAARGLDIKD 477

Query: 392 IRVVINYDFPTGVEDYVHRIGRTGRAGASGIAYTFCGDQDAKHASDLIKVLEGANQRVPN 213
           IRVVINYDFPTGVEDYVHRIGRTGRAGA+G+AYTF GDQDAKHASDLIKVLEGANQ+VP 
Sbjct: 478 IRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKHASDLIKVLEGANQQVPP 537

Query: 212 EI 207
           EI
Sbjct: 538 EI 539


>ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|222867004|gb|EEF04135.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  323 bits (827), Expect = 3e-86
 Identities = 158/182 (86%), Positives = 175/182 (96%)
 Frame = -1

Query: 752 KIAADLLVNPVQVNIGNVDELVANKSITQHVEIVSPMEKQRRVEQIVRSQEPGSKIIIFC 573
           KIAADLLVNPVQVNIGN+DELVANKSITQHVE+++P+EK RR+EQI+RSQEPGSKIIIFC
Sbjct: 347 KIAADLLVNPVQVNIGNIDELVANKSITQHVELLAPLEKHRRLEQILRSQEPGSKIIIFC 406

Query: 572 STKKMCDQLSRSLSRQFGTAAIHGDKSQGERDYVLNQFRTGRCPVLVATDVAARGLDIKD 393
           STKKMCDQL+R+L+RQFG AAIHGDKSQ ERD+VL+QFRTGR P+LVATDVAARGLDIKD
Sbjct: 407 STKKMCDQLARNLTRQFGAAAIHGDKSQSERDHVLSQFRTGRSPILVATDVAARGLDIKD 466

Query: 392 IRVVINYDFPTGVEDYVHRIGRTGRAGASGIAYTFCGDQDAKHASDLIKVLEGANQRVPN 213
           IRVV+NYDFPTGVEDYVHRIGRTGRAGA+G+AYTF GDQDAK+ASDLIKVLEGANQ VP 
Sbjct: 467 IRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKYASDLIKVLEGANQLVPP 526

Query: 212 EI 207
           EI
Sbjct: 527 EI 528


>ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Cucumis
           sativus]
          Length = 778

 Score =  321 bits (823), Expect = 9e-86
 Identities = 156/182 (85%), Positives = 175/182 (96%)
 Frame = -1

Query: 752 KIAADLLVNPVQVNIGNVDELVANKSITQHVEIVSPMEKQRRVEQIVRSQEPGSKIIIFC 573
           KIA+DLLVNP+QVNIGNVDELVANKSITQH+E ++P+EK RR+EQI+RSQEPGSK+IIFC
Sbjct: 354 KIASDLLVNPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKVIIFC 413

Query: 572 STKKMCDQLSRSLSRQFGTAAIHGDKSQGERDYVLNQFRTGRCPVLVATDVAARGLDIKD 393
           STKKMCDQL+R+L+RQFG AAIHGDKSQGERD+VL QFRTGR PVLVATDVAARGLDIKD
Sbjct: 414 STKKMCDQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKD 473

Query: 392 IRVVINYDFPTGVEDYVHRIGRTGRAGASGIAYTFCGDQDAKHASDLIKVLEGANQRVPN 213
           IRVVINYDFP+GVEDYVHRIGRTGRAGA+GIAYTF G+QDAK+ASDLIK+LEGANQRVP 
Sbjct: 474 IRVVINYDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPP 533

Query: 212 EI 207
           E+
Sbjct: 534 EL 535


>ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           46-like [Cucumis sativus]
          Length = 785

 Score =  321 bits (823), Expect = 9e-86
 Identities = 156/182 (85%), Positives = 175/182 (96%)
 Frame = -1

Query: 752 KIAADLLVNPVQVNIGNVDELVANKSITQHVEIVSPMEKQRRVEQIVRSQEPGSKIIIFC 573
           KIA+DLLVNP+QVNIGNVDELVANKSITQH+E ++P+EK RR+EQI+RSQEPGSK+IIFC
Sbjct: 361 KIASDLLVNPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKVIIFC 420

Query: 572 STKKMCDQLSRSLSRQFGTAAIHGDKSQGERDYVLNQFRTGRCPVLVATDVAARGLDIKD 393
           STKKMCDQL+R+L+RQFG AAIHGDKSQGERD+VL QFRTGR PVLVATDVAARGLDIKD
Sbjct: 421 STKKMCDQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKD 480

Query: 392 IRVVINYDFPTGVEDYVHRIGRTGRAGASGIAYTFCGDQDAKHASDLIKVLEGANQRVPN 213
           IRVVINYDFP+GVEDYVHRIGRTGRAGA+GIAYTF G+QDAK+ASDLIK+LEGANQRVP 
Sbjct: 481 IRVVINYDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPP 540

Query: 212 EI 207
           E+
Sbjct: 541 EL 542


>sp|P46942.1|DB10_NICSY RecName: Full=ATP-dependent RNA helicase-like protein DB10
           gi|563986|dbj|BAA03763.1| RNA helicase like protein DB10
           [Nicotiana sylvestris]
          Length = 607

 Score =  321 bits (823), Expect = 9e-86
 Identities = 159/182 (87%), Positives = 171/182 (93%)
 Frame = -1

Query: 752 KIAADLLVNPVQVNIGNVDELVANKSITQHVEIVSPMEKQRRVEQIVRSQEPGSKIIIFC 573
           KIAADLLVN VQVNIGNVDELVANKSITQH+E+V PMEKQRRVEQI+RS+EPGSKIIIFC
Sbjct: 338 KIAADLLVNSVQVNIGNVDELVANKSITQHIEVVLPMEKQRRVEQILRSKEPGSKIIIFC 397

Query: 572 STKKMCDQLSRSLSRQFGTAAIHGDKSQGERDYVLNQFRTGRCPVLVATDVAARGLDIKD 393
           STKKMCDQLSR+L+R FG AAIHGDKSQGERDYVL+QFR GR PVLVATDVAARGLDIKD
Sbjct: 398 STKKMCDQLSRNLTRNFGAAAIHGDKSQGERDYVLSQFRAGRSPVLVATDVAARGLDIKD 457

Query: 392 IRVVINYDFPTGVEDYVHRIGRTGRAGASGIAYTFCGDQDAKHASDLIKVLEGANQRVPN 213
           IRVVINYDFPTG+EDYVHRIGRTGRAGASG+AYTF  DQD+KHA DL+KVLEGANQ VP 
Sbjct: 458 IRVVINYDFPTGIEDYVHRIGRTGRAGASGLAYTFFSDQDSKHALDLVKVLEGANQCVPT 517

Query: 212 EI 207
           E+
Sbjct: 518 EL 519


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