BLASTX nr result

ID: Bupleurum21_contig00001930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001930
         (1533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From ...   218   3e-54
emb|CAA54374.1| chitinase, class V [Nicotiana tabacum]                218   3e-54
pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115...   217   8e-54
emb|CAA54373.1| chitinase, class V [Nicotiana tabacum]                216   1e-53
emb|CAA55128.1| chitinase/lysozyme [Nicotiana tabacum]                216   1e-53

>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana
            Tobaccum
          Length = 353

 Score =  218 bits (555), Expect = 3e-54
 Identities = 107/164 (65%), Positives = 125/164 (76%)
 Frame = -3

Query: 1096 NQLTISPANTAPFSEFTKNVQLKNPSVKTLLSIGGGSSNDADYASMASSPASRKTFIDSS 917
            NQL ISP N   F +FT  VQ KNPSVKT LSI GG +N   Y  MA  P SRK+FIDSS
Sbjct: 40   NQLIISPENQDSFRQFTSTVQRKNPSVKTFLSIAGGRANSTAYGIMARQPNSRKSFIDSS 99

Query: 916  LRLARSNNFLGLDLDWEYPLTATDMVNLGTFLDEWRLAADAEAQASGKPRLLLTAAVSVR 737
            +RLAR   F GLDLDWEYPL+A DM NLGT L+EWR A + EA+ SG+  LLLTAAVS  
Sbjct: 100  IRLARQLGFHGLDLDWEYPLSAADMTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNS 159

Query: 736  PIVDGLNYPVQSISKNLDWINVMAYDFYGPSWSPSTTNAPAALY 605
            P V+GLNYPV+S+++NLDWIN+MAYDFYGP+WSPS TN+ A L+
Sbjct: 160  PRVNGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLF 203



 Score =  112 bits (281), Expect = 2e-22
 Identities = 48/82 (58%), Positives = 61/82 (74%)
 Frame = -1

Query: 423 SRGYNQILDFITNNKATTVYNTTIEAYYCYAGTSWIGFDDKQSISAKVSYAKQQGLLGYF 244
           S  YN+I D+I  ++ATTVYN TI   YCY+G++WI +DD Q++  KV+Y K +GLLGYF
Sbjct: 266 SMTYNRIRDYIVESRATTVYNATIVGDYCYSGSNWISYDDTQTVRNKVNYVKGRGLLGYF 325

Query: 243 AWHVAADDNWALSQQAKQAWGV 178
           AWHVA D NW LS+ A Q WGV
Sbjct: 326 AWHVAGDQNWGLSRTASQTWGV 347


>emb|CAA54374.1| chitinase, class V [Nicotiana tabacum]
          Length = 377

 Score =  218 bits (555), Expect = 3e-54
 Identities = 107/164 (65%), Positives = 125/164 (76%)
 Frame = -3

Query: 1096 NQLTISPANTAPFSEFTKNVQLKNPSVKTLLSIGGGSSNDADYASMASSPASRKTFIDSS 917
            NQL ISP N   F +FT  VQ KNPSVKT LSI GG +N   Y  MA  P SRK+FIDSS
Sbjct: 64   NQLIISPENQDSFRQFTSTVQRKNPSVKTFLSIAGGRANSTAYGIMARQPNSRKSFIDSS 123

Query: 916  LRLARSNNFLGLDLDWEYPLTATDMVNLGTFLDEWRLAADAEAQASGKPRLLLTAAVSVR 737
            +RLAR   F GLDLDWEYPL+A DM NLGT L+EWR A + EA+ SG+  LLLTAAVS  
Sbjct: 124  IRLARQLGFHGLDLDWEYPLSAADMTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNS 183

Query: 736  PIVDGLNYPVQSISKNLDWINVMAYDFYGPSWSPSTTNAPAALY 605
            P V+GLNYPV+S+++NLDWIN+MAYDFYGP+WSPS TN+ A L+
Sbjct: 184  PRVNGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLF 227



 Score =  112 bits (281), Expect = 2e-22
 Identities = 48/82 (58%), Positives = 61/82 (74%)
 Frame = -1

Query: 423 SRGYNQILDFITNNKATTVYNTTIEAYYCYAGTSWIGFDDKQSISAKVSYAKQQGLLGYF 244
           S  YN+I D+I  ++ATTVYN TI   YCY+G++WI +DD Q++  KV+Y K +GLLGYF
Sbjct: 290 SMTYNRIRDYIVESRATTVYNATIVGDYCYSGSNWISYDDTQTVRNKVNYVKGRGLLGYF 349

Query: 243 AWHVAADDNWALSQQAKQAWGV 178
           AWHVA D NW LS+ A Q WGV
Sbjct: 350 AWHVAGDQNWGLSRTASQTWGV 371


>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From
            Nicotiana Tobaccum In Complex With Nag4
          Length = 353

 Score =  217 bits (552), Expect = 8e-54
 Identities = 106/164 (64%), Positives = 125/164 (76%)
 Frame = -3

Query: 1096 NQLTISPANTAPFSEFTKNVQLKNPSVKTLLSIGGGSSNDADYASMASSPASRKTFIDSS 917
            NQL ISP N   F +FT  VQ KNPSVKT LSI GG +N   Y  MA  P SRK+FIDSS
Sbjct: 40   NQLIISPENQDSFRQFTSTVQRKNPSVKTFLSIAGGRANSTAYGIMARQPNSRKSFIDSS 99

Query: 916  LRLARSNNFLGLDLDWEYPLTATDMVNLGTFLDEWRLAADAEAQASGKPRLLLTAAVSVR 737
            +RLAR   F GLDLDW+YPL+A DM NLGT L+EWR A + EA+ SG+  LLLTAAVS  
Sbjct: 100  IRLARQLGFHGLDLDWQYPLSAADMTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNS 159

Query: 736  PIVDGLNYPVQSISKNLDWINVMAYDFYGPSWSPSTTNAPAALY 605
            P V+GLNYPV+S+++NLDWIN+MAYDFYGP+WSPS TN+ A L+
Sbjct: 160  PRVNGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLF 203



 Score =  112 bits (281), Expect = 2e-22
 Identities = 48/82 (58%), Positives = 61/82 (74%)
 Frame = -1

Query: 423 SRGYNQILDFITNNKATTVYNTTIEAYYCYAGTSWIGFDDKQSISAKVSYAKQQGLLGYF 244
           S  YN+I D+I  ++ATTVYN TI   YCY+G++WI +DD Q++  KV+Y K +GLLGYF
Sbjct: 266 SMTYNRIRDYIVESRATTVYNATIVGDYCYSGSNWISYDDTQTVRNKVNYVKGRGLLGYF 325

Query: 243 AWHVAADDNWALSQQAKQAWGV 178
           AWHVA D NW LS+ A Q WGV
Sbjct: 326 AWHVAGDQNWGLSRTASQTWGV 347


>emb|CAA54373.1| chitinase, class V [Nicotiana tabacum]
          Length = 369

 Score =  216 bits (550), Expect = 1e-53
 Identities = 106/164 (64%), Positives = 126/164 (76%)
 Frame = -3

Query: 1096 NQLTISPANTAPFSEFTKNVQLKNPSVKTLLSIGGGSSNDADYASMASSPASRKTFIDSS 917
            NQL ISP N   FS+FT  VQ KNPSVKT LSI GG ++   Y  MA  P SRK+FIDSS
Sbjct: 56   NQLIISPENQDSFSQFTSTVQRKNPSVKTFLSIAGGRADTTAYGIMARQPNSRKSFIDSS 115

Query: 916  LRLARSNNFLGLDLDWEYPLTATDMVNLGTFLDEWRLAADAEAQASGKPRLLLTAAVSVR 737
            +RLAR   F GLDLDWEYPL+ATDM NLG  L+EWR A + EA+ SG+  LLLTAAVS  
Sbjct: 116  IRLARQFGFHGLDLDWEYPLSATDMTNLGILLNEWRTAINMEARNSGRAALLLTAAVSYS 175

Query: 736  PIVDGLNYPVQSISKNLDWINVMAYDFYGPSWSPSTTNAPAALY 605
            P V+GLNYPV+S+++NL+WIN+MAYDFYGP+WSPS TN+ A L+
Sbjct: 176  PRVNGLNYPVESVARNLNWINLMAYDFYGPNWSPSQTNSHAQLF 219



 Score =  114 bits (284), Expect = 9e-23
 Identities = 49/82 (59%), Positives = 61/82 (74%)
 Frame = -1

Query: 423 SRGYNQILDFITNNKATTVYNTTIEAYYCYAGTSWIGFDDKQSISAKVSYAKQQGLLGYF 244
           S  YN+I D+I  ++ATTVYN TI   YCY+G++WI +DD QS+  KV+Y K +GLLGYF
Sbjct: 282 SMTYNRIRDYIVQSRATTVYNATIVGDYCYSGSNWISYDDTQSVRNKVNYVKGRGLLGYF 341

Query: 243 AWHVAADDNWALSQQAKQAWGV 178
           AWHVA D NW LS+ A Q WGV
Sbjct: 342 AWHVAGDQNWGLSRTASQTWGV 363


>emb|CAA55128.1| chitinase/lysozyme [Nicotiana tabacum]
          Length = 378

 Score =  216 bits (550), Expect = 1e-53
 Identities = 106/164 (64%), Positives = 126/164 (76%)
 Frame = -3

Query: 1096 NQLTISPANTAPFSEFTKNVQLKNPSVKTLLSIGGGSSNDADYASMASSPASRKTFIDSS 917
            NQL ISP N   FS+FT  VQ KNPSVKT LSI GG ++   Y  MA  P SRK+FIDSS
Sbjct: 65   NQLIISPENQDSFSQFTSTVQRKNPSVKTFLSIAGGRADTTAYGIMARQPNSRKSFIDSS 124

Query: 916  LRLARSNNFLGLDLDWEYPLTATDMVNLGTFLDEWRLAADAEAQASGKPRLLLTAAVSVR 737
            +RLAR   F GLDLDWEYPL+ATDM NLG  L+EWR A + EA+ SG+  LLLTAAVS  
Sbjct: 125  IRLARQFGFHGLDLDWEYPLSATDMTNLGILLNEWRTAINMEARNSGRAALLLTAAVSYS 184

Query: 736  PIVDGLNYPVQSISKNLDWINVMAYDFYGPSWSPSTTNAPAALY 605
            P V+GLNYPV+S+++NL+WIN+MAYDFYGP+WSPS TN+ A L+
Sbjct: 185  PRVNGLNYPVESVARNLNWINLMAYDFYGPNWSPSQTNSHAQLF 228



 Score =  114 bits (284), Expect = 9e-23
 Identities = 49/82 (59%), Positives = 61/82 (74%)
 Frame = -1

Query: 423 SRGYNQILDFITNNKATTVYNTTIEAYYCYAGTSWIGFDDKQSISAKVSYAKQQGLLGYF 244
           S  YN+I D+I  ++ATTVYN TI   YCY+G++WI +DD QS+  KV+Y K +GLLGYF
Sbjct: 291 SMTYNRIRDYIVQSRATTVYNATIVGDYCYSGSNWISYDDTQSVRNKVNYVKGRGLLGYF 350

Query: 243 AWHVAADDNWALSQQAKQAWGV 178
           AWHVA D NW LS+ A Q WGV
Sbjct: 351 AWHVAGDQNWGLSRTASQTWGV 372


Top