BLASTX nr result

ID: Bupleurum21_contig00001911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001911
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV96171.1| ubiquitin conjugating enzyme S [Camellia oleifera]     297   2e-78
ref|XP_002523681.1| ubiquitin-conjugating enzyme e2S, putative [...   289   4e-76
ref|XP_002278601.2| PREDICTED: ubiquitin-conjugating enzyme E2 2...   286   4e-75
emb|CBI32855.3| unnamed protein product [Vitis vinifera]              286   4e-75
ref|XP_002308845.1| predicted protein [Populus trichocarpa] gi|2...   275   1e-71

>gb|AFV96171.1| ubiquitin conjugating enzyme S [Camellia oleifera]
          Length = 270

 Score =  297 bits (760), Expect = 2e-78
 Identities = 159/241 (65%), Positives = 177/241 (73%), Gaps = 2/241 (0%)
 Frame = -1

Query: 759 GVNDEDFSTIFADIEGPTGTPYENGVFRMKLILTHDFPHSPPAGYFLTKIFHPNVAPKNG 580
           GVND+DFS I+ADIEGP GTPYENGVFRMKLIL+HDFPHSPP GYFLTKIFHPN+A  NG
Sbjct: 33  GVNDDDFSIIYADIEGPAGTPYENGVFRMKLILSHDFPHSPPKGYFLTKIFHPNIAT-NG 91

Query: 579 EICVNTLKKDWNPSXXXXXXXXXXXXXLIEPFPGSALNEQAGKMLLDNYDEYARHARIYT 400
           EICVNTLKKDWNPS             LIEPFP SALNEQAGKMLL+NY+EYARHAR+YT
Sbjct: 92  EICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARLYT 151

Query: 399 DCHAMKPKPKFKNGAISESTTAVNVDQTNTSVLSVDQKNGXXXXXXXXXXXXXXXXXAVK 220
             HA+K KPKFK+GAISESTTA+NVDQ+NTSVL+VD+K                     K
Sbjct: 152 GIHALKQKPKFKSGAISESTTALNVDQSNTSVLNVDEKKASSGAALPLPSPLASTTTFTK 211

Query: 219 G--SQDQPTNAAPSTVTETGVGAXXXXXXXXXTQKKETIGLPKINADKKKIDARKKSLKR 46
           G   QDQP +A  ST TETGV +         TQKKE + L K+ ADKKK+DARKKSLKR
Sbjct: 212 GGNGQDQPASALNST-TETGVSSDSVAAPPPVTQKKE-VTLAKVQADKKKMDARKKSLKR 269

Query: 45  L 43
           L
Sbjct: 270 L 270


>ref|XP_002523681.1| ubiquitin-conjugating enzyme e2S, putative [Ricinus communis]
           gi|223537081|gb|EEF38716.1| ubiquitin-conjugating enzyme
           e2S, putative [Ricinus communis]
          Length = 269

 Score =  289 bits (740), Expect = 4e-76
 Identities = 153/239 (64%), Positives = 171/239 (71%)
 Frame = -1

Query: 759 GVNDEDFSTIFADIEGPTGTPYENGVFRMKLILTHDFPHSPPAGYFLTKIFHPNVAPKNG 580
           GVND+DFSTI+ADIEGP GTPYENG+FRMKL+L+ DFP+SPP GYFLTKIFHPN+A  NG
Sbjct: 33  GVNDDDFSTIYADIEGPAGTPYENGLFRMKLLLSRDFPYSPPKGYFLTKIFHPNIA-TNG 91

Query: 579 EICVNTLKKDWNPSXXXXXXXXXXXXXLIEPFPGSALNEQAGKMLLDNYDEYARHARIYT 400
           EICVNTLKKDWNPS             LIEPFP SALNEQAGKMLL+NYDEYARHAR+YT
Sbjct: 92  EICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYT 151

Query: 399 DCHAMKPKPKFKNGAISESTTAVNVDQTNTSVLSVDQKNGXXXXXXXXXXXXXXXXXAVK 220
             HA KPKPKFK+GAISESTTA+NVDQ+NTSVL+ DQKN                  A K
Sbjct: 152 AIHA-KPKPKFKSGAISESTTALNVDQSNTSVLNSDQKNTAVNAAIALPSPLSPCSVATK 210

Query: 219 GSQDQPTNAAPSTVTETGVGAXXXXXXXXXTQKKETIGLPKINADKKKIDARKKSLKRL 43
           G   Q  +AA + V ETGVG            +K+  G  K  ADKKK+DARKKSLKRL
Sbjct: 211 GGNSQEQSAAVAPVPETGVGGSVAVATPTVATQKKEAGPAKAQADKKKLDARKKSLKRL 269


>ref|XP_002278601.2| PREDICTED: ubiquitin-conjugating enzyme E2 22-like [Vitis vinifera]
          Length = 259

 Score =  286 bits (731), Expect = 4e-75
 Identities = 155/238 (65%), Positives = 171/238 (71%)
 Frame = -1

Query: 756 VNDEDFSTIFADIEGPTGTPYENGVFRMKLILTHDFPHSPPAGYFLTKIFHPNVAPKNGE 577
           VND+DFSTIFAD+EGP GTPYENGVFRMKL+L+HDFPHSPP GYFLTKIFHPN+A  NGE
Sbjct: 34  VNDDDFSTIFADVEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIAT-NGE 92

Query: 576 ICVNTLKKDWNPSXXXXXXXXXXXXXLIEPFPGSALNEQAGKMLLDNYDEYARHARIYTD 397
           ICVNTLKKDWNPS             LIEPFP SALNEQAGKMLL+NY+EYARHARIYT 
Sbjct: 93  ICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTG 152

Query: 396 CHAMKPKPKFKNGAISESTTAVNVDQTNTSVLSVDQKNGXXXXXXXXXXXXXXXXXAVKG 217
            HA+KPKPKFK GAISESTTA+NVDQTN+SVL+V+QKN                     G
Sbjct: 153 IHALKPKPKFKTGAISESTTALNVDQTNSSVLNVEQKNTALQLPPSSLATCMTAGGGKGG 212

Query: 216 SQDQPTNAAPSTVTETGVGAXXXXXXXXXTQKKETIGLPKINADKKKIDARKKSLKRL 43
              Q    AP+  TETGV             KKE+ GL K+ ADKKK+DARKKSLKRL
Sbjct: 213 GNGQ----APT--TETGVSG----SAAATPHKKES-GLAKVQADKKKMDARKKSLKRL 259


>emb|CBI32855.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  286 bits (731), Expect = 4e-75
 Identities = 155/238 (65%), Positives = 171/238 (71%)
 Frame = -1

Query: 756 VNDEDFSTIFADIEGPTGTPYENGVFRMKLILTHDFPHSPPAGYFLTKIFHPNVAPKNGE 577
           VND+DFSTIFAD+EGP GTPYENGVFRMKL+L+HDFPHSPP GYFLTKIFHPN+A  NGE
Sbjct: 86  VNDDDFSTIFADVEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIAT-NGE 144

Query: 576 ICVNTLKKDWNPSXXXXXXXXXXXXXLIEPFPGSALNEQAGKMLLDNYDEYARHARIYTD 397
           ICVNTLKKDWNPS             LIEPFP SALNEQAGKMLL+NY+EYARHARIYT 
Sbjct: 145 ICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTG 204

Query: 396 CHAMKPKPKFKNGAISESTTAVNVDQTNTSVLSVDQKNGXXXXXXXXXXXXXXXXXAVKG 217
            HA+KPKPKFK GAISESTTA+NVDQTN+SVL+V+QKN                     G
Sbjct: 205 IHALKPKPKFKTGAISESTTALNVDQTNSSVLNVEQKNTALQLPPSSLATCMTAGGGKGG 264

Query: 216 SQDQPTNAAPSTVTETGVGAXXXXXXXXXTQKKETIGLPKINADKKKIDARKKSLKRL 43
              Q    AP+  TETGV             KKE+ GL K+ ADKKK+DARKKSLKRL
Sbjct: 265 GNGQ----APT--TETGVSG----SAAATPHKKES-GLAKVQADKKKMDARKKSLKRL 311


>ref|XP_002308845.1| predicted protein [Populus trichocarpa] gi|222854821|gb|EEE92368.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  275 bits (702), Expect = 1e-71
 Identities = 153/242 (63%), Positives = 169/242 (69%), Gaps = 3/242 (1%)
 Frame = -1

Query: 759 GVNDEDFSTIFADIEGPTGTPYENGVFRMKLILTHDFPHSPPAGYFLTKIFHPNVAPKNG 580
           GVND+DFS I+ADIEGP GTPYENGVFRMKL+L+HDFPHSPP GYFLT+IFHPN+A  NG
Sbjct: 33  GVNDDDFSIIYADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTRIFHPNIA-SNG 91

Query: 579 EICVNTLKKDWNPSXXXXXXXXXXXXXLIEPFPGSALNEQAGKMLLDNYDEYARHARIYT 400
           EICVNTLKKDWNPS             LIEPFP SALNEQAGKMLL+NY+EYARHARIYT
Sbjct: 92  EICVNTLKKDWNPSLGLRHVLTVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYT 151

Query: 399 DCHAMKPKPKFKNGAISESTTAVNVDQTNTSVL-SVDQKNGXXXXXXXXXXXXXXXXXAV 223
             HA KPKPKFK+GAISESTTA+NVDQ+NTSVL + DQKN                  A 
Sbjct: 152 GIHA-KPKPKFKSGAISESTTALNVDQSNTSVLNNGDQKNAAVSAAVPLQSLLAPCTMAS 210

Query: 222 KG--SQDQPTNAAPSTVTETGVGAXXXXXXXXXTQKKETIGLPKINADKKKIDARKKSLK 49
           KG  SQDQ     P   TE    A            K+ +GL K+ A KKK+DARKKSLK
Sbjct: 211 KGGNSQDQLAVVGPMHETEVSGSAAAPTTSTL----KKDVGLSKVQAVKKKMDARKKSLK 266

Query: 48  RL 43
           RL
Sbjct: 267 RL 268


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