BLASTX nr result

ID: Bupleurum21_contig00001907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001907
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324749.1| predicted protein [Populus trichocarpa] gi|3...    63   2e-08
ref|XP_002275650.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    61   1e-07
ref|XP_002516491.1| Glutamyl-tRNA(Gln) amidotransferase subunit ...    59   5e-07
ref|XP_002466735.1| hypothetical protein SORBIDRAFT_01g013180 [S...    57   2e-06
ref|XP_004136231.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    56   3e-06

>ref|XP_002324749.1| predicted protein [Populus trichocarpa]
           gi|353558759|sp|B9INH0.1|GATC_POPTR RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|222866183|gb|EEF03314.1| predicted
           protein [Populus trichocarpa]
          Length = 141

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +3

Query: 6   RDDLPQTFENREAIVAAVPNYKDSYIKVPKVLNKE 110
           R D P+TFENREAI+AAVPNY+D Y+KVPKVLNKE
Sbjct: 107 RHDNPETFENREAIIAAVPNYEDPYVKVPKVLNKE 141


>ref|XP_002275650.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|353558764|sp|D7STK2.1|GATC_VITVI RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|296081596|emb|CBI20601.3| unnamed
           protein product [Vitis vinifera]
          Length = 137

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/35 (71%), Positives = 33/35 (94%)
 Frame = +3

Query: 6   RDDLPQTFENREAIVAAVPNYKDSYIKVPKVLNKE 110
           RDD P+TFENREAI+AA+P+Y++ Y+KVPKVLNK+
Sbjct: 103 RDDSPETFENREAIIAAIPSYEEPYLKVPKVLNKD 137


>ref|XP_002516491.1| Glutamyl-tRNA(Gln) amidotransferase subunit C, putative [Ricinus
           communis] gi|353558760|sp|B9RRX2.1|GATC_RICCO RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|223544311|gb|EEF45832.1|
           Glutamyl-tRNA(Gln) amidotransferase subunit C, putative
           [Ricinus communis]
          Length = 143

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +3

Query: 6   RDDLPQTFENREAIVAAVPNYKDSYIKVPKVLNKE 110
           RDD+P+TF  REAI+AAVP+Y+  Y+KVPKVLNKE
Sbjct: 109 RDDVPETFSEREAIIAAVPSYEKPYVKVPKVLNKE 143


>ref|XP_002466735.1| hypothetical protein SORBIDRAFT_01g013180 [Sorghum bicolor]
           gi|353558762|sp|C5WR30.1|GATC_SORBI RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|241920589|gb|EER93733.1|
           hypothetical protein SORBIDRAFT_01g013180 [Sorghum
           bicolor]
          Length = 146

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/35 (68%), Positives = 31/35 (88%)
 Frame = +3

Query: 6   RDDLPQTFENREAIVAAVPNYKDSYIKVPKVLNKE 110
           R+D P+TF+NR+AIV A+P+Y D YIKVP+VLNKE
Sbjct: 112 REDKPETFDNRDAIVEAIPSYDDPYIKVPRVLNKE 146


>ref|XP_004136231.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 145

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/35 (68%), Positives = 31/35 (88%)
 Frame = +3

Query: 6   RDDLPQTFENREAIVAAVPNYKDSYIKVPKVLNKE 110
           R+D+P+TFENREA++ AVP + + YIKVPKVLNKE
Sbjct: 111 RNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE 145


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