BLASTX nr result

ID: Bupleurum21_contig00001901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001901
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275650.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   130   1e-28
ref|XP_004136231.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   126   3e-27
ref|XP_002516491.1| Glutamyl-tRNA(Gln) amidotransferase subunit ...   124   1e-26
ref|XP_004161755.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   122   3e-26
ref|XP_002324749.1| predicted protein [Populus trichocarpa] gi|3...   120   1e-25

>ref|XP_002275650.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|353558764|sp|D7STK2.1|GATC_VITVI RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|296081596|emb|CBI20601.3| unnamed
           protein product [Vitis vinifera]
          Length = 137

 Score =  130 bits (327), Expect = 1e-28
 Identities = 59/82 (71%), Positives = 75/82 (91%)
 Frame = +3

Query: 3   RISLSPTQVEEFSPTIQKVVDWFGQLQNVNLESIEPAIRADTEGSNWRDDLPQTFENREA 182
           RISL+P +VEEF+P I++V+DWFGQLQ V+L+SIEP+IRADTEG N RDD P+TFENREA
Sbjct: 56  RISLTPHEVEEFAPKIRQVIDWFGQLQAVDLQSIEPSIRADTEGDNLRDDSPETFENREA 115

Query: 183 IVAAVPNYEDSYIKVPKVLNKE 248
           I+AA+P+YE+ Y+KVPKVLNK+
Sbjct: 116 IIAAIPSYEEPYLKVPKVLNKD 137


>ref|XP_004136231.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 145

 Score =  126 bits (316), Expect = 3e-27
 Identities = 58/82 (70%), Positives = 73/82 (89%)
 Frame = +3

Query: 3   RISLSPTQVEEFSPTIQKVVDWFGQLQNVNLESIEPAIRADTEGSNWRDDLPQTFENREA 182
           RISL+PTQ EEF+P I +VVDWFGQLQ V+L+SIEP+IRADTEG + R+D+P+TFENREA
Sbjct: 64  RISLTPTQAEEFAPKITQVVDWFGQLQTVDLQSIEPSIRADTEGGSQRNDIPETFENREA 123

Query: 183 IVAAVPNYEDSYIKVPKVLNKE 248
           ++ AVP +++ YIKVPKVLNKE
Sbjct: 124 MIGAVPVFDEPYIKVPKVLNKE 145


>ref|XP_002516491.1| Glutamyl-tRNA(Gln) amidotransferase subunit C, putative [Ricinus
           communis] gi|353558760|sp|B9RRX2.1|GATC_RICCO RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|223544311|gb|EEF45832.1|
           Glutamyl-tRNA(Gln) amidotransferase subunit C, putative
           [Ricinus communis]
          Length = 143

 Score =  124 bits (311), Expect = 1e-26
 Identities = 57/82 (69%), Positives = 71/82 (86%)
 Frame = +3

Query: 3   RISLSPTQVEEFSPTIQKVVDWFGQLQNVNLESIEPAIRADTEGSNWRDDLPQTFENREA 182
           RISL+  +VEEF+P I++V+DWFGQLQ V+L S+EPAIRAD+EG N RDD+P+TF  REA
Sbjct: 62  RISLNQNEVEEFAPKIRQVIDWFGQLQAVDLNSVEPAIRADSEGENLRDDVPETFSEREA 121

Query: 183 IVAAVPNYEDSYIKVPKVLNKE 248
           I+AAVP+YE  Y+KVPKVLNKE
Sbjct: 122 IIAAVPSYEKPYVKVPKVLNKE 143


>ref|XP_004161755.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 145

 Score =  122 bits (307), Expect = 3e-26
 Identities = 57/82 (69%), Positives = 72/82 (87%)
 Frame = +3

Query: 3   RISLSPTQVEEFSPTIQKVVDWFGQLQNVNLESIEPAIRADTEGSNWRDDLPQTFENREA 182
           RISL+PTQ EEF+P I +VVDWFGQLQ V+L+SIEP+IRADTEG + R+D+P+TFENREA
Sbjct: 64  RISLTPTQAEEFAPKITQVVDWFGQLQTVDLQSIEPSIRADTEGGSQRNDIPETFENREA 123

Query: 183 IVAAVPNYEDSYIKVPKVLNKE 248
           ++ AVP +++  IKVPKVLNKE
Sbjct: 124 MIGAVPVFDEPNIKVPKVLNKE 145


>ref|XP_002324749.1| predicted protein [Populus trichocarpa]
           gi|353558759|sp|B9INH0.1|GATC_POPTR RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|222866183|gb|EEF03314.1| predicted
           protein [Populus trichocarpa]
          Length = 141

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/82 (70%), Positives = 70/82 (85%)
 Frame = +3

Query: 3   RISLSPTQVEEFSPTIQKVVDWFGQLQNVNLESIEPAIRADTEGSNWRDDLPQTFENREA 182
           RISL+P QVEEF P I++V+DW   L +V+L+S+EP+IRADTEG N R D P+TFENREA
Sbjct: 61  RISLTPQQVEEFGPKIRQVIDWHALL-SVDLDSVEPSIRADTEGDNLRHDNPETFENREA 119

Query: 183 IVAAVPNYEDSYIKVPKVLNKE 248
           I+AAVPNYED Y+KVPKVLNKE
Sbjct: 120 IIAAVPNYEDPYVKVPKVLNKE 141


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