BLASTX nr result

ID: Bupleurum21_contig00001891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001891
         (1159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83288.1| hypothetical protein VITISV_033233 [Vitis vinifera]   312   1e-82
ref|XP_002302474.1| predicted protein [Populus trichocarpa] gi|2...   308   1e-81
emb|CBI19652.3| unnamed protein product [Vitis vinifera]              307   3e-81
ref|XP_002281773.1| PREDICTED: probable GMP synthase [glutamine-...   307   3e-81
ref|XP_002510348.1| DNA-3-methyladenine glycosylase, putative [R...   300   4e-79

>emb|CAN83288.1| hypothetical protein VITISV_033233 [Vitis vinifera]
          Length = 335

 Score =  312 bits (799), Expect = 1e-82
 Identities = 170/315 (53%), Positives = 207/315 (65%), Gaps = 15/315 (4%)
 Frame = +2

Query: 77  SESRTILGPAGNRVDVSEHXXXXXXXXXXXXXXXXXXXXXPVRAAVDRSKISGDVVLSCV 256
           SE R +LGP GNR  VSE                      P   AV R+ +S +   SC 
Sbjct: 15  SEGRVVLGPGGNRFRVSEEAKCKKEGLKKPQQHRKQSSEVP--EAVIRNNLSFES--SCS 70

Query: 257 XXXXXXXXXXXRQSGRKAVPR----AVKQLSSRVSVPLKRCDWITPFSDPLYVAFHDGEW 424
                        + R  V R     VK +   V VP KRCDWITP SDPLY +FHD EW
Sbjct: 71  SDSSSSGSSVKMVNSRGRVKRNGLKPVKVVPHGVEVPAKRCDWITPNSDPLYTSFHDEEW 130

Query: 425 GVPVRDDQRLFELFVLSIALAELTWPEILYKRDLFRNHFDDFDPTSVAKFSEEKLLSVKA 604
           GVPV DD++LFEL VLS ALAEL+WP IL KRD+FR  FD+FDP+S+AKF+++KLLS+KA
Sbjct: 131 GVPVHDDKKLFELLVLSQALAELSWPTILNKRDIFRKLFDNFDPSSIAKFTDKKLLSLKA 190

Query: 605 NCSTLLSEQKLRAVVENANQLLKV----------QVEHGSFSNYFWRFVNNKPIRNGIRY 754
           +  TLLSE KLRAV+ENANQ+LKV            E GSFSNY W F+N+KP++NG RY
Sbjct: 191 SGGTLLSEPKLRAVIENANQMLKVIKFITRCLWFSQEFGSFSNYCWSFINHKPMKNGFRY 250

Query: 755 ARQVPVKTP-KSEAISKDLMQRGFRCVGPTVVYSFMQVAGMTNDHLITCFRYHECNSKVE 931
           ARQVPVKT  ++  ISKDLMQRGFRCVGPTV+YSFMQVAG+ NDHL+TCFR+ ECNS ++
Sbjct: 251 ARQVPVKTQNQNNIISKDLMQRGFRCVGPTVIYSFMQVAGLVNDHLLTCFRFQECNSNIK 310

Query: 932 LNLKSKKVANKVSAN 976
            +L++K    +V  N
Sbjct: 311 KDLQAKTEETEVLTN 325


>ref|XP_002302474.1| predicted protein [Populus trichocarpa] gi|222844200|gb|EEE81747.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  308 bits (790), Expect = 1e-81
 Identities = 147/211 (69%), Positives = 173/211 (81%)
 Frame = +2

Query: 317 RAVKQLSSRVSVPLKRCDWITPFSDPLYVAFHDGEWGVPVRDDQRLFELFVLSIALAELT 496
           R +K +SS+   P+KRCDWITP SDPLY++FHD EWGVPV DD++LFEL V S ALAEL+
Sbjct: 50  REIKDVSSKKERPVKRCDWITPNSDPLYMSFHDEEWGVPVYDDRKLFELLVYSQALAELS 109

Query: 497 WPEILYKRDLFRNHFDDFDPTSVAKFSEEKLLSVKANCSTLLSEQKLRAVVENANQLLKV 676
           WP IL+ RD+F   FD+FDP+S+A+F+E+KLLS++ N + LLSE KLRAVVENA Q+LK+
Sbjct: 110 WPAILHMRDIFWKLFDNFDPSSIAQFTEKKLLSLRFNGNLLLSEPKLRAVVENAKQMLKI 169

Query: 677 QVEHGSFSNYFWRFVNNKPIRNGIRYARQVPVKTPKSEAISKDLMQRGFRCVGPTVVYSF 856
           Q E GSFSNY WRFVN KP+RNG RYARQVPVKTPK+E ISKDLMQRGFRCVGPT VYSF
Sbjct: 170 QQEFGSFSNYCWRFVNQKPLRNGFRYARQVPVKTPKAELISKDLMQRGFRCVGPTAVYSF 229

Query: 857 MQVAGMTNDHLITCFRYHECNSKVELNLKSK 949
           MQVAG  NDHL  CFRY ECN  V+ + K K
Sbjct: 230 MQVAGFVNDHLKACFRYQECNVDVKKDFKPK 260


>emb|CBI19652.3| unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  307 bits (787), Expect = 3e-81
 Identities = 165/304 (54%), Positives = 200/304 (65%), Gaps = 4/304 (1%)
 Frame = +2

Query: 77  SESRTILGPAGNRVDVSEHXXXXXXXXXXXXXXXXXXXXXPVRAAVDRSKISGDVVLSCV 256
           SE R +LGP GNR  VSE                      P   AV R+ +S +   SC 
Sbjct: 15  SEGRVVLGPGGNRFRVSEEAKRKKEGLKKPQQHRKQSSEVP--EAVVRNNLSFES--SCS 70

Query: 257 XXXXXXXXXXXRQSGRKAVPR----AVKQLSSRVSVPLKRCDWITPFSDPLYVAFHDGEW 424
                        + R  V R     VK +   V VP KRCDWITP SDPLY +FHD EW
Sbjct: 71  SDSSSSGSSVKMVNSRGRVKRNGLKPVKVVPHGVEVPAKRCDWITPNSDPLYTSFHDEEW 130

Query: 425 GVPVRDDQRLFELFVLSIALAELTWPEILYKRDLFRNHFDDFDPTSVAKFSEEKLLSVKA 604
           GVPV DD++LFEL VLS ALAEL+WP IL KRD+FR  FD+FDP+S+AKF+++KLLS+KA
Sbjct: 131 GVPVHDDKKLFELLVLSQALAELSWPTILNKRDIFRKLFDNFDPSSIAKFTDKKLLSLKA 190

Query: 605 NCSTLLSEQKLRAVVENANQLLKVQVEHGSFSNYFWRFVNNKPIRNGIRYARQVPVKTPK 784
           +  TLLSE KLRAV+ENANQ+LKVQ E GSFSNY W F+N+KP++NG RYARQVPVKT  
Sbjct: 191 SGGTLLSEPKLRAVIENANQMLKVQQEFGSFSNYCWSFINHKPMKNGFRYARQVPVKT-- 248

Query: 785 SEAISKDLMQRGFRCVGPTVVYSFMQVAGMTNDHLITCFRYHECNSKVELNLKSKKVANK 964
                    QRGFRCVGPTV+YSFMQVAG+ NDHL+TCFR+ ECNS ++ +L++K    +
Sbjct: 249 ---------QRGFRCVGPTVIYSFMQVAGLVNDHLLTCFRFQECNSNIKKDLQAKTEETE 299

Query: 965 VSAN 976
           V  N
Sbjct: 300 VLTN 303


>ref|XP_002281773.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Vitis vinifera]
          Length = 315

 Score =  307 bits (787), Expect = 3e-81
 Identities = 165/304 (54%), Positives = 200/304 (65%), Gaps = 4/304 (1%)
 Frame = +2

Query: 77  SESRTILGPAGNRVDVSEHXXXXXXXXXXXXXXXXXXXXXPVRAAVDRSKISGDVVLSCV 256
           SE R +LGP GNR  VSE                      P   AV R+ +S +   SC 
Sbjct: 17  SEGRVVLGPGGNRFRVSEEAKRKKEGLKKPQQHRKQSSEVP--EAVVRNNLSFES--SCS 72

Query: 257 XXXXXXXXXXXRQSGRKAVPR----AVKQLSSRVSVPLKRCDWITPFSDPLYVAFHDGEW 424
                        + R  V R     VK +   V VP KRCDWITP SDPLY +FHD EW
Sbjct: 73  SDSSSSGSSVKMVNSRGRVKRNGLKPVKVVPHGVEVPAKRCDWITPNSDPLYTSFHDEEW 132

Query: 425 GVPVRDDQRLFELFVLSIALAELTWPEILYKRDLFRNHFDDFDPTSVAKFSEEKLLSVKA 604
           GVPV DD++LFEL VLS ALAEL+WP IL KRD+FR  FD+FDP+S+AKF+++KLLS+KA
Sbjct: 133 GVPVHDDKKLFELLVLSQALAELSWPTILNKRDIFRKLFDNFDPSSIAKFTDKKLLSLKA 192

Query: 605 NCSTLLSEQKLRAVVENANQLLKVQVEHGSFSNYFWRFVNNKPIRNGIRYARQVPVKTPK 784
           +  TLLSE KLRAV+ENANQ+LKVQ E GSFSNY W F+N+KP++NG RYARQVPVKT  
Sbjct: 193 SGGTLLSEPKLRAVIENANQMLKVQQEFGSFSNYCWSFINHKPMKNGFRYARQVPVKT-- 250

Query: 785 SEAISKDLMQRGFRCVGPTVVYSFMQVAGMTNDHLITCFRYHECNSKVELNLKSKKVANK 964
                    QRGFRCVGPTV+YSFMQVAG+ NDHL+TCFR+ ECNS ++ +L++K    +
Sbjct: 251 ---------QRGFRCVGPTVIYSFMQVAGLVNDHLLTCFRFQECNSNIKKDLQAKTEETE 301

Query: 965 VSAN 976
           V  N
Sbjct: 302 VLTN 305


>ref|XP_002510348.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
           gi|223551049|gb|EEF52535.1| DNA-3-methyladenine
           glycosylase, putative [Ricinus communis]
          Length = 336

 Score =  300 bits (769), Expect = 4e-79
 Identities = 163/298 (54%), Positives = 194/298 (65%), Gaps = 14/298 (4%)
 Frame = +2

Query: 80  ESRTILGPAGNRVDVSEHXXXXXXXXXXXXXXXXXXXXXPV---------RAAVDRSKIS 232
           E R ILGP GNRV V E                                   +VD S  S
Sbjct: 16  ERRAILGPTGNRVRVLEECRRKDELLKKSQQQKKPKKPAVSDMPQVVVKHNLSVDSSCSS 75

Query: 233 GDVVLSCVXXXXXXXXXXXRQSGRKAVPRAVKQLSSRVSVPLKRCDWITPFSDPLYVAFH 412
                S             ++S  K VP    + +S+  +P+KRCDWIT  SD LY++FH
Sbjct: 76  SSSSSSGSLRKVASPRRNVKRSAVKIVPEGA-EFASKQDLPVKRCDWITSNSDSLYMSFH 134

Query: 413 DGEWGVPVRDDQRLFELFVLSIALAELTWPEILYKRDL-----FRNHFDDFDPTSVAKFS 577
           D EWGVPV DD +LFEL V S ALAE++WP IL+ R++     FR  FD+FDP+SVA+F+
Sbjct: 135 DEEWGVPVHDDTKLFELLVFSQALAEMSWPTILHMRNIXXRNIFRKLFDNFDPSSVAQFT 194

Query: 578 EEKLLSVKANCSTLLSEQKLRAVVENANQLLKVQVEHGSFSNYFWRFVNNKPIRNGIRYA 757
           E+KLLS+K N + LLSE KLRA+VENA  LLKVQ E GSFSNY WRFVNNKP+RNG RYA
Sbjct: 195 EKKLLSLKVNGNLLLSEPKLRAIVENAKLLLKVQQEFGSFSNYCWRFVNNKPLRNGFRYA 254

Query: 758 RQVPVKTPKSEAISKDLMQRGFRCVGPTVVYSFMQVAGMTNDHLITCFRYHECNSKVE 931
           RQ+PVKTPK+E ISKDLMQRGFRCVGPTVVYSFMQVAG+ NDHL+TCFRY EC + V+
Sbjct: 255 RQIPVKTPKAEFISKDLMQRGFRCVGPTVVYSFMQVAGIVNDHLLTCFRYQECIANVK 312


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