BLASTX nr result

ID: Bupleurum21_contig00001886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001886
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143436.1| PREDICTED: serine hydroxymethyltransferase, ...   142   2e-32
ref|XP_002527226.1| serine hydroxymethyltransferase, putative [R...   141   5e-32
ref|XP_003612955.1| Serine hydroxymethyltransferase [Medicago tr...   141   6e-32
ref|XP_003612954.1| Serine hydroxymethyltransferase [Medicago tr...   141   6e-32
ref|XP_004160122.1| PREDICTED: LOW QUALITY PROTEIN: serine hydro...   140   1e-31

>ref|XP_004143436.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
           [Cucumis sativus]
          Length = 519

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/77 (90%), Positives = 75/77 (97%)
 Frame = +1

Query: 1   RVEKVMEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDGAVNL 180
           RVEKV+E+VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFD AVN+
Sbjct: 402 RVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDAAVNI 461

Query: 181 ALKIKSEAKGTKLKDFL 231
           A+KIK+E KGTKLKDFL
Sbjct: 462 AVKIKAETKGTKLKDFL 478


>ref|XP_002527226.1| serine hydroxymethyltransferase, putative [Ricinus communis]
           gi|223533402|gb|EEF35152.1| serine
           hydroxymethyltransferase, putative [Ricinus communis]
          Length = 515

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/77 (90%), Positives = 73/77 (94%)
 Frame = +1

Query: 1   RVEKVMEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDGAVNL 180
           RVEKV+EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDFAKVAEFFD AV L
Sbjct: 401 RVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEFFDAAVKL 460

Query: 181 ALKIKSEAKGTKLKDFL 231
           A+KIK E KGTKLKDFL
Sbjct: 461 AVKIKGETKGTKLKDFL 477


>ref|XP_003612955.1| Serine hydroxymethyltransferase [Medicago truncatula]
           gi|355514290|gb|AES95913.1| Serine
           hydroxymethyltransferase [Medicago truncatula]
          Length = 319

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/77 (89%), Positives = 75/77 (97%)
 Frame = +1

Query: 1   RVEKVMEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDGAVNL 180
           RVEKV+EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVAE+FD +VNL
Sbjct: 202 RVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDASVNL 261

Query: 181 ALKIKSEAKGTKLKDFL 231
           ALKIK+E+KGTKLKDF+
Sbjct: 262 ALKIKAESKGTKLKDFV 278


>ref|XP_003612954.1| Serine hydroxymethyltransferase [Medicago truncatula]
           gi|163889372|gb|ABY48142.1|
           serine-hydroxymethyltransferase [Medicago truncatula]
           gi|355514289|gb|AES95912.1| Serine
           hydroxymethyltransferase [Medicago truncatula]
          Length = 518

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/77 (89%), Positives = 75/77 (97%)
 Frame = +1

Query: 1   RVEKVMEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDGAVNL 180
           RVEKV+EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVAE+FD +VNL
Sbjct: 401 RVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDASVNL 460

Query: 181 ALKIKSEAKGTKLKDFL 231
           ALKIK+E+KGTKLKDF+
Sbjct: 461 ALKIKAESKGTKLKDFV 477


>ref|XP_004160122.1| PREDICTED: LOW QUALITY PROTEIN: serine hydroxymethyltransferase,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/77 (89%), Positives = 74/77 (96%)
 Frame = +1

Query: 1   RVEKVMEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDGAVNL 180
           RVEKV+E+VHIAAN NTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFD AVN+
Sbjct: 402 RVEKVLESVHIAANXNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDAAVNI 461

Query: 181 ALKIKSEAKGTKLKDFL 231
           A+KIK+E KGTKLKDFL
Sbjct: 462 AVKIKAETKGTKLKDFL 478


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