BLASTX nr result
ID: Bupleurum21_contig00001880
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00001880
(1047 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002525369.1| nucleoredoxin, putative [Ricinus communis] g... 127 3e-27
emb|CBI28536.3| unnamed protein product [Vitis vinifera] 127 6e-27
ref|XP_003631262.1| PREDICTED: probable nucleoredoxin 1-like [Vi... 127 6e-27
gb|ABR16144.1| unknown [Picea sitchensis] gi|224286874|gb|ACN411... 125 2e-26
ref|XP_002314536.1| predicted protein [Populus trichocarpa] gi|2... 124 5e-26
>ref|XP_002525369.1| nucleoredoxin, putative [Ricinus communis]
gi|223535332|gb|EEF37007.1| nucleoredoxin, putative
[Ricinus communis]
Length = 575
Score = 127 bits (320), Expect = 3e-27
Identities = 92/283 (32%), Positives = 134/283 (47%), Gaps = 3/283 (1%)
Frame = +2
Query: 206 DVQNGDKFNLSDLLFTKDRDFLIKYNDDQPVKAEQLSNKVIVLFFASLVESDTSLMEGQV 385
++ NGD + LL + DRD+LI+ N DQ V+ + L K + L+F++
Sbjct: 3 EMVNGDYHDFVSLLSSSDRDYLIRNNGDQ-VEIDSLKGKKLGLYFSASWCGPCQRFTPT- 60
Query: 386 YLSDIYTELHPQGLLEVVFVALDDHVPLSKNPTHSERFHNKFSRMPWTAIPFSDPLSRKY 565
L ++Y EL P+G E+VF+ D+ E F FS+MPW AIPFSD R
Sbjct: 61 -LVEVYNELAPKGDFEIVFITADED---------DESFEEYFSKMPWLAIPFSDSDKRDR 110
Query: 566 LGLRFGINSRKNTPSAYVFDPTGVVLQRSGFPCFS-FGASAFPFTNERIDQLVSEYDAVL 742
L F + + P + D G V SG +G +PFT ERI L + +
Sbjct: 111 LDEIFKV---QGIPHFVILDENGKVSSESGVEIIQEYGVQCYPFTAERIKVLKGQEEEAR 167
Query: 743 SKPSLGKLLVSPQRDYLITNKNVRVPVCDLTKKVVALYFYEDGRSN--DLTTKLKEAYDE 916
SL +LV RDY+I + +V V +L K V LYF ++ D T+ L E Y++
Sbjct: 168 RNQSLRSILVFGSRDYVIASDGKKVSVSELEGKTVGLYFSLSSYTSCVDFTSTLAEVYEK 227
Query: 917 LVLKNKKNFEVVLVYISNSWQTCHXXXXXXXXXXXXMPWLALP 1045
L K +NFE+V + + + +T MPWLA P
Sbjct: 228 LKAKG-ENFEIVFISLDDEEET-------FQQSLANMPWLAFP 262
Score = 92.0 bits (227), Expect = 2e-16
Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 4/276 (1%)
Frame = +2
Query: 230 NLSDLLFTKDRDFLIKYNDDQPVKAEQLSNKVIVLFFASLVESDTSLMEGQVYLSDIYTE 409
+L +L RD++I +D + V +L K + L+F+ + S TS ++ L+++Y +
Sbjct: 171 SLRSILVFGSRDYVIA-SDGKKVSVSELEGKTVGLYFS--LSSYTSCVDFTSTLAEVYEK 227
Query: 410 LHPQGL-LEVVFVALDDHVPLSKNPTHSERFHNKFSRMPWTAIPFSDPLSRKYLGLRFGI 586
L +G E+VF++LDD E F + MPW A PF+D K + F +
Sbjct: 228 LKAKGENFEIVFISLDDE---------EETFQQSLANMPWLAFPFNDKGCEKLVRY-FEL 277
Query: 587 NSRKNTPSAYVFDPTGVVLQRSGFPCFS-FGASAFPFTNERIDQLVSEYDAVLSKPSLGK 763
++ P+ V P G L + G A+PFT E+ +L A + +L
Sbjct: 278 ST---VPTLVVIGPDGKTLHSNVAEAIEEHGVQAYPFTPEKFAELAEMEKAREAAQTLES 334
Query: 764 LLVSPQRDYLITNKNVRVPVCDLTKKVVALYF--YEDGRSNDLTTKLKEAYDELVLKNKK 937
+LVS ++++I ++PV DL K + LYF + KL EAY E+ K+
Sbjct: 335 VLVSGDQNFVIGRDGAKIPVTDLVGKNILLYFSAHWCPPCRAFLPKLVEAYHEIKTKDDA 394
Query: 938 NFEVVLVYISNSWQTCHXXXXXXXXXXXXMPWLALP 1045
FEV+ + + MPWLALP
Sbjct: 395 -FEVIFI-------SSDRDQASFDEFFSGMPWLALP 422
>emb|CBI28536.3| unnamed protein product [Vitis vinifera]
Length = 542
Score = 127 bits (318), Expect = 6e-27
Identities = 94/283 (33%), Positives = 142/283 (50%), Gaps = 3/283 (1%)
Frame = +2
Query: 206 DVQNGDKFNLSDLLFTKDRDFLIKYNDDQPVKAEQLSNKVIVLFFASLVESDTSLMEGQV 385
D +G +L LL ++DRDFL++ N Q VK E L K I L+F++ +
Sbjct: 4 DKIDGVSHDLVLLLTSEDRDFLVRNNGHQ-VKVESLKGKKIWLYFSASWCGPCRQFTPK- 61
Query: 386 YLSDIYTELHPQGLLEVVFVALDDHVPLSKNPTHSERFHNKFSRMPWTAIPFSDPLSRKY 565
L ++Y E +G E++FV+LD L F+ FS+MPW AIPFSD +R +
Sbjct: 62 -LVEVYDEFSSKGDFEIIFVSLDKGDQL---------FNEYFSKMPWLAIPFSDSDTRDH 111
Query: 566 LGLRFGINSRKNTPSAYVFDPTGVVLQRSGFPCFS-FGASAFPFTNERIDQLVSEYDAVL 742
L F + + PS + D +G VL G +G +PFT E+I +L + +
Sbjct: 112 LKKLFKM---RGIPSLAMLDESGKVLSSEGVEIIKDYGVEGYPFTAEKIKELKEKEETAK 168
Query: 743 SKPSLGKLLVSPQRDYLITNKNVRVPVCDLTKKVVALYFYEDGRS--NDLTTKLKEAYDE 916
+ SL +LVS RDY+I+ +V V +L K+V LYF + + TT L E Y+E
Sbjct: 169 KEQSLRSILVSQSRDYVISADGRKVSVSELEGKLVGLYFSLSSYNACQEFTTTLAEVYEE 228
Query: 917 LVLKNKKNFEVVLVYISNSWQTCHXXXXXXXXXXXXMPWLALP 1045
L K ++FE+V++ + + Q+ MPW ALP
Sbjct: 229 LRAKG-ESFEIVMISLDDEEQS-------FKKYFESMPWFALP 263
Score = 87.4 bits (215), Expect = 5e-15
Identities = 83/300 (27%), Positives = 128/300 (42%), Gaps = 7/300 (2%)
Frame = +2
Query: 167 EEVGINETTIKPEDVQNGDKFNLSDLLFTKDRDFLIKYNDDQPVKAEQLSNKVIVLFFAS 346
+E+ E T K E +L +L ++ RD++I D + V +L K++ L+F+
Sbjct: 158 KELKEKEETAKKEQ-------SLRSILVSQSRDYVISA-DGRKVSVSELEGKLVGLYFS- 208
Query: 347 LVESDTSLMEGQVYLSDIYTELHPQG-LLEVVFVALDDHVPLSKNPTHSERFHNKFSRMP 523
+ S + E L+++Y EL +G E+V ++LDD + F F MP
Sbjct: 209 -LSSYNACQEFTTTLAEVYEELRAKGESFEIVMISLDDE---------EQSFKKYFESMP 258
Query: 524 WTAIPFSDPLSRK---YLGLRFGINSRKNTPSAYVFDPTGVVLQRSGFPCFS-FGASAFP 691
W A+PF+D K Y LR P+ V G L + G A+P
Sbjct: 259 WFALPFNDKSCGKLARYFKLRV-------LPTLVVIGQDGKTLHSNVAEAIEQHGIQAYP 311
Query: 692 FTNERIDQLVSEYDAVLSKPSLGKLLVSPQRDYLITNKNVRVPVCDLTKKVVALYF--YE 865
FT E+ +L A +L +LVS D++I V++PV L K + LYF +
Sbjct: 312 FTPEKFVELEEIEKAKREAQTLESILVSGDTDFVIGKDGVKIPVSHLAGKNILLYFSAHW 371
Query: 866 DGRSNDLTTKLKEAYDELVLKNKKNFEVVLVYISNSWQTCHXXXXXXXXXXXXMPWLALP 1045
KL EAY + K++ FEV+ + + MPWLALP
Sbjct: 372 CPPCRAFLPKLIEAYQNIKAKDEA-FEVIFI-------SSDRDQASFDEFFSGMPWLALP 423
>ref|XP_003631262.1| PREDICTED: probable nucleoredoxin 1-like [Vitis vinifera]
Length = 573
Score = 127 bits (318), Expect = 6e-27
Identities = 94/283 (33%), Positives = 142/283 (50%), Gaps = 3/283 (1%)
Frame = +2
Query: 206 DVQNGDKFNLSDLLFTKDRDFLIKYNDDQPVKAEQLSNKVIVLFFASLVESDTSLMEGQV 385
D +G +L LL ++DRDFL++ N Q VK E L K I L+F++ +
Sbjct: 4 DKIDGVSHDLVLLLTSEDRDFLVRNNGHQ-VKVESLKGKKIWLYFSASWCGPCRQFTPK- 61
Query: 386 YLSDIYTELHPQGLLEVVFVALDDHVPLSKNPTHSERFHNKFSRMPWTAIPFSDPLSRKY 565
L ++Y E +G E++FV+LD L F+ FS+MPW AIPFSD +R +
Sbjct: 62 -LVEVYDEFSSKGDFEIIFVSLDKGDQL---------FNEYFSKMPWLAIPFSDSDTRDH 111
Query: 566 LGLRFGINSRKNTPSAYVFDPTGVVLQRSGFPCFS-FGASAFPFTNERIDQLVSEYDAVL 742
L F + + PS + D +G VL G +G +PFT E+I +L + +
Sbjct: 112 LKKLFKM---RGIPSLAMLDESGKVLSSEGVEIIKDYGVEGYPFTAEKIKELKEKEETAK 168
Query: 743 SKPSLGKLLVSPQRDYLITNKNVRVPVCDLTKKVVALYFYEDGRS--NDLTTKLKEAYDE 916
+ SL +LVS RDY+I+ +V V +L K+V LYF + + TT L E Y+E
Sbjct: 169 KEQSLRSILVSQSRDYVISADGRKVSVSELEGKLVGLYFSLSSYNACQEFTTTLAEVYEE 228
Query: 917 LVLKNKKNFEVVLVYISNSWQTCHXXXXXXXXXXXXMPWLALP 1045
L K ++FE+V++ + + Q+ MPW ALP
Sbjct: 229 LRAKG-ESFEIVMISLDDEEQS-------FKKYFESMPWFALP 263
Score = 87.4 bits (215), Expect = 5e-15
Identities = 83/300 (27%), Positives = 128/300 (42%), Gaps = 7/300 (2%)
Frame = +2
Query: 167 EEVGINETTIKPEDVQNGDKFNLSDLLFTKDRDFLIKYNDDQPVKAEQLSNKVIVLFFAS 346
+E+ E T K E +L +L ++ RD++I D + V +L K++ L+F+
Sbjct: 158 KELKEKEETAKKEQ-------SLRSILVSQSRDYVISA-DGRKVSVSELEGKLVGLYFS- 208
Query: 347 LVESDTSLMEGQVYLSDIYTELHPQG-LLEVVFVALDDHVPLSKNPTHSERFHNKFSRMP 523
+ S + E L+++Y EL +G E+V ++LDD + F F MP
Sbjct: 209 -LSSYNACQEFTTTLAEVYEELRAKGESFEIVMISLDDE---------EQSFKKYFESMP 258
Query: 524 WTAIPFSDPLSRK---YLGLRFGINSRKNTPSAYVFDPTGVVLQRSGFPCFS-FGASAFP 691
W A+PF+D K Y LR P+ V G L + G A+P
Sbjct: 259 WFALPFNDKSCGKLARYFKLRV-------LPTLVVIGQDGKTLHSNVAEAIEQHGIQAYP 311
Query: 692 FTNERIDQLVSEYDAVLSKPSLGKLLVSPQRDYLITNKNVRVPVCDLTKKVVALYF--YE 865
FT E+ +L A +L +LVS D++I V++PV L K + LYF +
Sbjct: 312 FTPEKFVELEEIEKAKREAQTLESILVSGDTDFVIGKDGVKIPVSHLAGKNILLYFSAHW 371
Query: 866 DGRSNDLTTKLKEAYDELVLKNKKNFEVVLVYISNSWQTCHXXXXXXXXXXXXMPWLALP 1045
KL EAY + K++ FEV+ + + MPWLALP
Sbjct: 372 CPPCRAFLPKLIEAYQNIKAKDEA-FEVIFI-------SSDRDQASFDEFFSGMPWLALP 423
>gb|ABR16144.1| unknown [Picea sitchensis] gi|224286874|gb|ACN41140.1| unknown [Picea
sitchensis]
Length = 586
Score = 125 bits (313), Expect = 2e-26
Identities = 92/279 (32%), Positives = 148/279 (53%), Gaps = 7/279 (2%)
Frame = +2
Query: 230 NLSDLLFTKDRDFLIKYNDDQPVKAEQLSNKVIVLFFASL----VESDTSLMEGQVYLSD 397
+LS LL ++RDFLI+ N D+ VK E+L K + L+F++ S T + LS+
Sbjct: 19 SLSSLLCNEERDFLIRNNGDK-VKVEELEGKYVGLYFSAHWCPPCRSFTPV------LSE 71
Query: 398 IYTELHPQGLLEVVFVALDDHVPLSKNPTHSERFHNKFSRMPWTAIPFSDPLSRKYLGLR 577
IY +L +G ++VF++ D ++ E +H+ MPW A+PFSD +RK L
Sbjct: 72 IYKKLLEKGDFDIVFISAD------RDEKSFEEYHHT---MPWLALPFSDENTRKNLNQA 122
Query: 578 FGINSRKNTPSAYVFDPTGVVLQRSGFPCFS-FGASAFPFTNERIDQLVSEYDAVLSKPS 754
F ++ P + D G V+ G + A A+PFT ER+D+L ++ +A+ + +
Sbjct: 123 FQVHG---IPCLVILDKEGRVITAKGVEIIKEYSAEAYPFTAERLDELRAKEEAIRAAQT 179
Query: 755 LGKLLVSPQRDYLITNKNVRVPVCDLTKKVVALYF--YEDGRSNDLTTKLKEAYDELVLK 928
+ LL+S +RD+++ ++ +VPV +L K V LYF + G T +L E Y+EL LK
Sbjct: 180 VESLLLSDERDFVLGHEGTQVPVAELAGKTVGLYFSAHWCGPCRSFTPQLVEIYNEL-LK 238
Query: 929 NKKNFEVVLVYISNSWQTCHXXXXXXXXXXXXMPWLALP 1045
+ FE+ V++S + MPWLALP
Sbjct: 239 KGEAFEI--VFLSRDKE-----EKAFEEYYASMPWLALP 270
Score = 98.2 bits (243), Expect = 3e-18
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 4/293 (1%)
Frame = +2
Query: 179 INETTIKPEDVQNGDKFNLSDLLFTKDRDFLIKYNDDQPVKAEQLSNKVIVLFFASLVES 358
++E K E ++ + LL + +RDF++ + Q V +L+ K + L+F++
Sbjct: 164 LDELRAKEEAIRAAQ--TVESLLLSDERDFVLGHEGTQ-VPVAELAGKTVGLYFSAHWCG 220
Query: 359 DTSLMEGQVYLSDIYTELHPQG-LLEVVFVALDDHVPLSKNPTHSERFHNKFSRMPWTAI 535
Q L +IY EL +G E+VF++ D + F ++ MPW A+
Sbjct: 221 PCRSFTPQ--LVEIYNELLKKGEAFEIVFLSRDKE---------EKAFEEYYASMPWLAL 269
Query: 536 PFSDPLSRKYLGLRFGINSRKNTPSAYVFDPTGVVLQRSGFPCF-SFGASAFPFTNERID 712
PF+D + K L F + P+ + P G +Q +G A+PFT ER+D
Sbjct: 270 PFADN-TEKNLSRYFRV---PGIPTLIILGPDGKTVQTDAVGLIRDYGIRAYPFTKERLD 325
Query: 713 QLVSEYDAVLSKPSLGKLLVSPQRDYLITNKNVRVPVCDLTKKVVALYF--YEDGRSNDL 886
+L +E +A +L LLVS +R+++I + + +V V +L K VALYF +
Sbjct: 326 ELEAEEEAKREAQTLESLLVSDERNFVINHGDAQVLVSELVGKTVALYFSAHWCPPCRSF 385
Query: 887 TTKLKEAYDELVLKNKKNFEVVLVYISNSWQTCHXXXXXXXXXXXXMPWLALP 1045
T +L + Y+EL + + FE+V + + + MPWLALP
Sbjct: 386 TPELTKVYNEL-KERGETFEIVFISMDRNQDA-------FEDYYKSMPWLALP 430
Score = 60.5 bits (145), Expect = 7e-07
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Frame = +2
Query: 194 IKPEDVQNGDKFNLSDLLFTKDRDFLIKYNDDQPVKAEQLSNKVIVLFFASLVESDTSLM 373
++ E+ + L LL + +R+F+I + D Q + +E + V + F A S
Sbjct: 327 LEAEEEAKREAQTLESLLVSDERNFVINHGDAQVLVSELVGKTVALYFSAHWCPPCRSFT 386
Query: 374 EGQVYLSDIYTELHPQG-LLEVVFVALDDHVPLSKNPTHSERFHNKFSRMPWTAIPFSDP 550
L+ +Y EL +G E+VF+++D + + F + + MPW A+PF D
Sbjct: 387 PE---LTKVYNELKERGETFEIVFISMD---------RNQDAFEDYYKSMPWLALPFGDK 434
Query: 551 LSRKYLGLRFGINSRKNTPSAYVFDPTG-VVLQRSGFPCFSFGASAFPFTNERIDQLVSE 727
++K L F + + PS V P G V + + GA A+PFT +L E
Sbjct: 435 -TKKDLSRFFRV---RGIPSLIVVGPDGKTVTSNARSAVSTHGARAYPFTEAHFQRLQKE 490
Query: 728 YDAVLSKPSLGKLLVSPQRDYLITNKNVRVPVCDLTKKVVALYFY 862
++ K + Q ++ + V VCD K + + Y
Sbjct: 491 MKELVENSP--KEIKYNQHEHPLVLTQRPVFVCDGCNKDGSAWSY 533
>ref|XP_002314536.1| predicted protein [Populus trichocarpa] gi|222863576|gb|EEF00707.1|
predicted protein [Populus trichocarpa]
Length = 462
Score = 124 bits (310), Expect = 5e-26
Identities = 96/288 (33%), Positives = 140/288 (48%), Gaps = 7/288 (2%)
Frame = +2
Query: 203 EDVQNGDKFNLSDLLFTKDRDFLIKYNDDQPVKAEQLSNKVIVLFFASL----VESDTSL 370
EDV + +LS LL +++RDFLI+ N DQ VK L K++ +F+ + T L
Sbjct: 1 EDVSH----DLSSLLSSEERDFLIRNNGDQ-VKVSNLVGKIVGFYFSGSWCGPCRNFTPL 55
Query: 371 MEGQVYLSDIYTELHPQGLLEVVFVALDDHVPLSKNPTHSERFHNKFSRMPWTAIPFSDP 550
L ++Y +L +G EVVF++ D E F+ FS MPW AIPFSD
Sbjct: 56 ------LVEVYEQLSSKGGFEVVFISSDGD---------DESFNTYFSEMPWLAIPFSDT 100
Query: 551 LSRKYLGLRFGINSRKNTPSAYVFDPTGVVLQRSGFPCFS-FGASAFPFTNERIDQLVSE 727
+R+ L F + + P +FD G V +G G +PF +R++ L +
Sbjct: 101 ETRQRLKEVFKV---RGIPRLVIFDTNGKVSSDNGVRHVKEHGVDGYPFNLDRLNFLKEQ 157
Query: 728 YDAVLSKPSLGKLLVSPQRDYLITNKNVRVPVCDLTKKVVALYF--YEDGRSNDLTTKLK 901
+ ++ +LVS RDY+I+N ++PV DL K+V LYF + + T KL
Sbjct: 158 EENAKKNQTISSILVSSSRDYVISNDGKKIPVLDLEGKLVGLYFSVHAHTMCGEFTPKLV 217
Query: 902 EAYDELVLKNKKNFEVVLVYISNSWQTCHXXXXXXXXXXXXMPWLALP 1045
E Y L K +NFEVVLV + + + MPWLALP
Sbjct: 218 ELYKTLKEKG-ENFEVVLVSLDDEEE-------DFKESFETMPWLALP 257
Score = 90.9 bits (224), Expect = 5e-16
Identities = 81/278 (29%), Positives = 119/278 (42%), Gaps = 7/278 (2%)
Frame = +2
Query: 233 LSDLLFTKDRDFLIKYNDDQPVKAEQLSNKVIVLFFASLVESDTSLMEGQVYLSDIYTEL 412
+S +L + RD++I ND + + L K++ L+F+ V + T E L ++Y L
Sbjct: 167 ISSILVSSSRDYVIS-NDGKKIPVLDLEGKLVGLYFS--VHAHTMCGEFTPKLVELYKTL 223
Query: 413 HPQGL-LEVVFVALDDHVPLSKNPTHSERFHNKFSRMPWTAIPFSDPLSRK---YLGLRF 580
+G EVV V+LDD E F F MPW A+PF D K Y LR
Sbjct: 224 KEKGENFEVVLVSLDDE---------EEDFKESFETMPWLALPFKDKSCEKLVRYFELR- 273
Query: 581 GINSRKNTPSAYVFDPTGVVLQRSGFPCF-SFGASAFPFTNERIDQLVSEYDAVLSKPSL 757
P+ + G L + G A+PFT E++++L A L +L
Sbjct: 274 ------TIPNLVIIGQDGKTLNPNVAELIEDHGIEAYPFTPEKLEELAEIEKAKLESQTL 327
Query: 758 GKLLVSPQRDYLITNKNVRVPVCDLTKKVVALYFYED--GRSNDLTTKLKEAYDELVLKN 931
+LV+ + D++I +V V DL K + LYF KL EAY + K+
Sbjct: 328 ESVLVNGENDFVIDKSGSKVRVSDLVGKNILLYFSAQWCPPCRAFLPKLIEAYHTIKAKD 387
Query: 932 KKNFEVVLVYISNSWQTCHXXXXXXXXXXXXMPWLALP 1045
FEV+ + + T MPWLALP
Sbjct: 388 NA-FEVIFISSDSDQST-------FDEFYSEMPWLALP 417