BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001871
         (3366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode...   967   0.0  
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su...   957   0.0  
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta...   957   0.0  
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su...   956   0.0  
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su...   951   0.0  

>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
          Length = 1191

 Score =  967 bits (2499), Expect(2) = 0.0
 Identities = 478/522 (91%), Positives = 486/522 (93%)
 Frame = +2

Query: 479  ALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK 658
            ALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK
Sbjct: 279  ALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK 338

Query: 659  RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMD 838
            RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+D
Sbjct: 339  RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLD 398

Query: 839  LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG 1018
            LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG
Sbjct: 399  LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG 458

Query: 1019 QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP 1198
            QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP
Sbjct: 459  QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP 518

Query: 1199 EGQACGLVKNLALMVYVTVGSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVG 1378
            EGQACGLVKNLALMVY+TVGSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVG
Sbjct: 519  EGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG 578

Query: 1379 IHRDPDMXXXXXXXXXXXXXXNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIR 1558
            IHRDPDM              NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI+
Sbjct: 579  IHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIK 638

Query: 1559 RKDIEALQQKEGPEDGGWHDLVAKGFXXXXXXXXXXXXXXXXXXNDLRSARENPEEAYSD 1738
            RKDI+ALQQ+E PEDGGWHDLVAKGF                  NDL SAR NPEEAYS+
Sbjct: 639  RKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARLNPEEAYSE 698

Query: 1739 TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVL 1918
            TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDT+AYVL
Sbjct: 699  TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTVAYVL 758

Query: 1919 YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2044
            YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 759  YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 800



 Score =  261 bits (668), Expect(2) = 0.0
 Identities = 128/133 (96%), Positives = 130/133 (97%)
 Frame = +1

Query: 1   LTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTE 180
           LTYSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTE
Sbjct: 119 LTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 178

Query: 181 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP 360
           LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPP
Sbjct: 179 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPP 238

Query: 361 STMFVRMLSRTSA 399
           STMFVRMLSRTSA
Sbjct: 239 STMFVRMLSRTSA 251



 Score =  750 bits (1937), Expect = 0.0
 Identities = 369/393 (93%), Positives = 377/393 (95%)
 Frame = +1

Query: 2107 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL 2286
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL
Sbjct: 801  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL 860

Query: 2287 APPGTRVSGEDVIIGKTTPIXXXXXXXXXXXSRYTRSDHSTSLRHSETGMVDQVLLTTNA 2466
            APPGTRVSGEDV+IGKTTPI           +RYTR DHSTSLRHSETGMVDQVLLTTNA
Sbjct: 861  APPGTRVSGEDVVIGKTTPIAQDEAQGPA--ARYTRRDHSTSLRHSETGMVDQVLLTTNA 918

Query: 2467 DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 2646
            DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIP
Sbjct: 919  DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTMEGITPDIIVNPHAIP 978

Query: 2647 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 2826
            SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG
Sbjct: 979  SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 1038

Query: 2827 RRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 3006
            RRLT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM
Sbjct: 1039 RRLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 1098

Query: 3007 IAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRSCKNKTDIVQVHIPYA 3186
            IAHGAAHFLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECR CKNKTDIVQVHIPYA
Sbjct: 1099 IAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYA 1158

Query: 3187 CKLLFQELMSMAIAPRMLTKDVKIAKELKKRGA 3285
            CKLLFQELMSMAIAPRMLTKDVK AK+ KK+ A
Sbjct: 1159 CKLLFQELMSMAIAPRMLTKDVKQAKDKKKKQA 1191


>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus]
          Length = 1199

 Score =  957 bits (2473), Expect(2) = 0.0
 Identities = 472/522 (90%), Positives = 483/522 (92%)
 Frame = +2

Query: 479  ALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK 658
            ALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTKEK
Sbjct: 287  ALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEK 346

Query: 659  RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMD 838
            RIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+D
Sbjct: 347  RIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLD 406

Query: 839  LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG 1018
            LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG
Sbjct: 407  LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG 466

Query: 1019 QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP 1198
            QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP
Sbjct: 467  QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP 526

Query: 1199 EGQACGLVKNLALMVYVTVGSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVG 1378
            EGQACGLVKNLALMVY+TVGSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVG
Sbjct: 527  EGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG 586

Query: 1379 IHRDPDMXXXXXXXXXXXXXXNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIR 1558
            IHRDP+M              NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI+
Sbjct: 587  IHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIK 646

Query: 1559 RKDIEALQQKEGPEDGGWHDLVAKGFXXXXXXXXXXXXXXXXXXNDLRSARENPEEAYSD 1738
            +KDI ALQQ+E PEDGGWHDLVAKGF                  +DL  AR NP EAYSD
Sbjct: 647  KKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISMTISDLIQARINPVEAYSD 706

Query: 1739 TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVL 1918
            TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVL
Sbjct: 707  TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVL 766

Query: 1919 YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2044
            YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 767  YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 808



 Score =  261 bits (667), Expect(2) = 0.0
 Identities = 128/133 (96%), Positives = 130/133 (97%)
 Frame = +1

Query: 1   LTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTE 180
           LTYSAPLY DVSKRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTE
Sbjct: 127 LTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 186

Query: 181 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP 360
           LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPP
Sbjct: 187 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPP 246

Query: 361 STMFVRMLSRTSA 399
           STMFVRMLSRTSA
Sbjct: 247 STMFVRMLSRTSA 259



 Score =  732 bits (1890), Expect = 0.0
 Identities = 359/393 (91%), Positives = 373/393 (94%)
 Frame = +1

Query: 2107 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL 2286
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGL
Sbjct: 809  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGL 868

Query: 2287 APPGTRVSGEDVIIGKTTPIXXXXXXXXXXXSRYTRSDHSTSLRHSETGMVDQVLLTTNA 2466
            APPGTRVSGEDVIIGKTTPI           +RY+R DHS SLRHSE G+VDQVLLTTNA
Sbjct: 869  APPGTRVSGEDVIIGKTTPISQEEAQGQA--ARYSRRDHSISLRHSENGIVDQVLLTTNA 926

Query: 2467 DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 2646
            DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP
Sbjct: 927  DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 986

Query: 2647 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 2826
            SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG
Sbjct: 987  SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 1046

Query: 2827 RRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 3006
            RRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM
Sbjct: 1047 RRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 1106

Query: 3007 IAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRSCKNKTDIVQVHIPYA 3186
            IAHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKK+SFECR CKNKTDIVQV+IPYA
Sbjct: 1107 IAHGAAHFLKERLFDQSDAYRIHVCECCGLIAIANLKKSSFECRGCKNKTDIVQVYIPYA 1166

Query: 3187 CKLLFQELMSMAIAPRMLTKDVKIAKELKKRGA 3285
            CKLLFQELM+MAIAPRM TK++K  K+ KK+G+
Sbjct: 1167 CKLLFQELMAMAIAPRMFTKEIKPLKDQKKKGS 1199


>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 1194

 Score =  957 bits (2473), Expect(2) = 0.0
 Identities = 473/522 (90%), Positives = 482/522 (92%)
 Frame = +2

Query: 479  ALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK 658
            ALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK
Sbjct: 282  ALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK 341

Query: 659  RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMD 838
            RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+D
Sbjct: 342  RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLD 401

Query: 839  LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG 1018
            LAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG
Sbjct: 402  LAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG 461

Query: 1019 QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP 1198
            QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP
Sbjct: 462  QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP 521

Query: 1199 EGQACGLVKNLALMVYVTVGSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVG 1378
            EGQACGLVKNLALMVY+TVGSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVG
Sbjct: 522  EGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG 581

Query: 1379 IHRDPDMXXXXXXXXXXXXXXNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIR 1558
            IHRDPDM              NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI+
Sbjct: 582  IHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIK 641

Query: 1559 RKDIEALQQKEGPEDGGWHDLVAKGFXXXXXXXXXXXXXXXXXXNDLRSARENPEEAYSD 1738
            +KDI ALQQ+E  E+GGWHDLVAKGF                  +DL  AR NPEEAYSD
Sbjct: 642  KKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSD 701

Query: 1739 TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVL 1918
            TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVL
Sbjct: 702  TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVL 761

Query: 1919 YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2044
            YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 762  YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 803



 Score =  261 bits (668), Expect(2) = 0.0
 Identities = 128/133 (96%), Positives = 130/133 (97%)
 Frame = +1

Query: 1   LTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTE 180
           LTYSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTE
Sbjct: 122 LTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 181

Query: 181 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP 360
           LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPP
Sbjct: 182 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPP 241

Query: 361 STMFVRMLSRTSA 399
           STMFVRMLSRTSA
Sbjct: 242 STMFVRMLSRTSA 254



 Score =  750 bits (1936), Expect = 0.0
 Identities = 370/393 (94%), Positives = 376/393 (95%)
 Frame = +1

Query: 2107 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL 2286
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL
Sbjct: 804  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL 863

Query: 2287 APPGTRVSGEDVIIGKTTPIXXXXXXXXXXXSRYTRSDHSTSLRHSETGMVDQVLLTTNA 2466
            APPGTRVSGEDVIIGKTTPI           +RYTR DHS SLRHSETG+VDQVLLTTNA
Sbjct: 864  APPGTRVSGEDVIIGKTTPIAQEEAQGQS--ARYTRRDHSISLRHSETGIVDQVLLTTNA 921

Query: 2467 DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 2646
            DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP
Sbjct: 922  DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 981

Query: 2647 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 2826
            SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG
Sbjct: 982  SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 1041

Query: 2827 RRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 3006
            RRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM
Sbjct: 1042 RRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 1101

Query: 3007 IAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRSCKNKTDIVQVHIPYA 3186
            IAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECR CKNKTDIVQVHIPYA
Sbjct: 1102 IAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYA 1161

Query: 3187 CKLLFQELMSMAIAPRMLTKDVKIAKELKKRGA 3285
            CKLLFQELM+MAIAPRMLTKDVK  K+ KK+GA
Sbjct: 1162 CKLLFQELMAMAIAPRMLTKDVKPTKDQKKKGA 1194


>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1192

 Score =  956 bits (2472), Expect(2) = 0.0
 Identities = 471/522 (90%), Positives = 483/522 (92%)
 Frame = +2

Query: 479  ALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK 658
            ALGFVADKDILEHICYDF+ TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK
Sbjct: 282  ALGFVADKDILEHICYDFSYTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK 341

Query: 659  RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMD 838
            RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+D
Sbjct: 342  RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLD 401

Query: 839  LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG 1018
            LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG
Sbjct: 402  LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG 461

Query: 1019 QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP 1198
            QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP
Sbjct: 462  QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP 521

Query: 1199 EGQACGLVKNLALMVYVTVGSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVG 1378
            EGQACGLVKNLALMVY+TVGSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCW+G
Sbjct: 522  EGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMG 581

Query: 1379 IHRDPDMXXXXXXXXXXXXXXNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIR 1558
            IHRDPDM              NTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLI+
Sbjct: 582  IHRDPDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIK 641

Query: 1559 RKDIEALQQKEGPEDGGWHDLVAKGFXXXXXXXXXXXXXXXXXXNDLRSARENPEEAYSD 1738
            +KDI ALQQ+E PEDGGWHDLV+KGF                  NDL  AR NPE+AYSD
Sbjct: 642  KKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYSD 701

Query: 1739 TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVL 1918
            TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVL
Sbjct: 702  TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVL 761

Query: 1919 YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2044
            YYPQKPLVTTRAMEHLHFRQLPAGINAIV+IACYSGYNQEDS
Sbjct: 762  YYPQKPLVTTRAMEHLHFRQLPAGINAIVSIACYSGYNQEDS 803



 Score =  259 bits (663), Expect(2) = 0.0
 Identities = 127/133 (95%), Positives = 129/133 (96%)
 Frame = +1

Query: 1   LTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTE 180
           LTYSAPLY DVSKRVIKKGHDGEEVTE QDF KVFIGKVPIMLRSSYCTLYQN+EKDLTE
Sbjct: 122 LTYSAPLYVDVSKRVIKKGHDGEEVTEAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 181

Query: 181 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP 360
           LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPP
Sbjct: 182 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPP 241

Query: 361 STMFVRMLSRTSA 399
           STMFVRMLSRTS+
Sbjct: 242 STMFVRMLSRTSS 254



 Score =  736 bits (1901), Expect = 0.0
 Identities = 365/393 (92%), Positives = 373/393 (94%)
 Frame = +1

Query: 2107 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL 2286
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL
Sbjct: 804  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL 863

Query: 2287 APPGTRVSGEDVIIGKTTPIXXXXXXXXXXXSRYTRSDHSTSLRHSETGMVDQVLLTTNA 2466
            APPGTRVSGEDVIIGKTTPI            RYTR DHS SLRHSETG+VDQVLLTTNA
Sbjct: 864  APPGTRVSGEDVIIGKTTPISQEEAQGQAL--RYTRRDHSISLRHSETGIVDQVLLTTNA 921

Query: 2467 DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 2646
            DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP
Sbjct: 922  DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 981

Query: 2647 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 2826
            SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG
Sbjct: 982  SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 1041

Query: 2827 RRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 3006
            RRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM
Sbjct: 1042 RRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 1101

Query: 3007 IAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRSCKNKTDIVQVHIPYA 3186
            IAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECR CKNKTDIVQV+IPYA
Sbjct: 1102 IAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYA 1161

Query: 3187 CKLLFQELMSMAIAPRMLTKDVKIAKELKKRGA 3285
            CKLLFQELM+MAIAPRMLTK+VK   +  K+GA
Sbjct: 1162 CKLLFQELMAMAIAPRMLTKEVKTTNQ--KKGA 1192


>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1193

 Score =  951 bits (2459), Expect(2) = 0.0
 Identities = 469/522 (89%), Positives = 481/522 (92%)
 Frame = +2

Query: 479  ALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK 658
            ALGFVADKDILEHICYDF+DT MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK
Sbjct: 282  ALGFVADKDILEHICYDFSDTLMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEK 341

Query: 659  RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMD 838
            RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+D
Sbjct: 342  RIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLD 401

Query: 839  LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG 1018
            LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG
Sbjct: 402  LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWG 461

Query: 1019 QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP 1198
            QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP
Sbjct: 462  QANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETP 521

Query: 1199 EGQACGLVKNLALMVYVTVGSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVG 1378
            EGQACGLVKNLALMVY+TVGSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCW+G
Sbjct: 522  EGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMG 581

Query: 1379 IHRDPDMXXXXXXXXXXXXXXNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIR 1558
            IHRDPDM              NTEVGVVRDI LKELRIYTDYGRCSRPLFIV+KQRLLI+
Sbjct: 582  IHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIILKELRIYTDYGRCSRPLFIVDKQRLLIK 641

Query: 1559 RKDIEALQQKEGPEDGGWHDLVAKGFXXXXXXXXXXXXXXXXXXNDLRSARENPEEAYSD 1738
            +KDI ALQQ+E PEDGGWHDLV+KGF                  NDL  AR NPE+AY+ 
Sbjct: 642  KKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYAG 701

Query: 1739 TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVL 1918
            TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVL
Sbjct: 702  TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVL 761

Query: 1919 YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2044
            YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 762  YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 803



 Score =  259 bits (661), Expect(2) = 0.0
 Identities = 126/133 (94%), Positives = 129/133 (96%)
 Frame = +1

Query: 1   LTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTE 180
           LTYSAPLY DVSKRV+KKGHDGEEVTETQD  KVFIGKVPIMLRSSYCTLYQN+EKDLTE
Sbjct: 122 LTYSAPLYVDVSKRVVKKGHDGEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 181

Query: 181 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP 360
           LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPP
Sbjct: 182 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPP 241

Query: 361 STMFVRMLSRTSA 399
           STMFVRMLSRTS+
Sbjct: 242 STMFVRMLSRTSS 254



 Score =  739 bits (1907), Expect = 0.0
 Identities = 366/393 (93%), Positives = 374/393 (95%)
 Frame = +1

Query: 2107 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL 2286
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL
Sbjct: 804  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGL 863

Query: 2287 APPGTRVSGEDVIIGKTTPIXXXXXXXXXXXSRYTRSDHSTSLRHSETGMVDQVLLTTNA 2466
            APPGTRVSGEDVIIGKTTPI            RYTR DHS SLRHSETG+VDQVLLTTNA
Sbjct: 864  APPGTRVSGEDVIIGKTTPISQEEAQGQAL--RYTRRDHSISLRHSETGIVDQVLLTTNA 921

Query: 2467 DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 2646
            DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP
Sbjct: 922  DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 981

Query: 2647 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 2826
            SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG
Sbjct: 982  SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 1041

Query: 2827 RRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 3006
            RRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM
Sbjct: 1042 RRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 1101

Query: 3007 IAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRSCKNKTDIVQVHIPYA 3186
            IAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECR CKNKTDIVQV+IPYA
Sbjct: 1102 IAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYA 1161

Query: 3187 CKLLFQELMSMAIAPRMLTKDVKIAKELKKRGA 3285
            CKLLFQELM+MAIAPRMLTK+VK   + KK+GA
Sbjct: 1162 CKLLFQELMAMAIAPRMLTKEVKTTNQ-KKKGA 1193