BLASTX nr result

ID: Bupleurum21_contig00001868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001868
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510224.1| protein translocase, putative [Ricinus commu...   268   1e-69
ref|XP_002302438.1| predicted protein [Populus trichocarpa] gi|2...   267   3e-69
ref|XP_002326937.1| predicted protein [Populus trichocarpa] gi|2...   267   3e-69
emb|CBI19527.3| unnamed protein product [Vitis vinifera]              262   6e-68
ref|XP_002284687.1| PREDICTED: protein TIC 22, chloroplastic-lik...   262   6e-68

>ref|XP_002510224.1| protein translocase, putative [Ricinus communis]
           gi|223550925|gb|EEF52411.1| protein translocase,
           putative [Ricinus communis]
          Length = 272

 Score =  268 bits (685), Expect = 1e-69
 Identities = 131/162 (80%), Positives = 146/162 (90%)
 Frame = +3

Query: 3   LCFRQEDAEAFLSQVRLNKGGIKGHARVVPITLDQVYMLKVEGIAFRFMPDPVQIKNALE 182
           LCFRQEDAEAFL+QVRL +  ++  AR+VPITLDQVYMLKVEGIAFRF+PDPVQIKNALE
Sbjct: 110 LCFRQEDAEAFLAQVRLRRRELRSQARIVPITLDQVYMLKVEGIAFRFLPDPVQIKNALE 169

Query: 183 LKASDVKSGFDGVPVFQSDILVVKKKNKRYCPIYFRKEDIEQELSTVSRSVRGSTLSQQI 362
           LKASD K GFDGVP+FQS++LVVKKKNKRYCPIYF+KEDIE+ELS VSR+ RG  LSQ I
Sbjct: 170 LKASDTKRGFDGVPIFQSELLVVKKKNKRYCPIYFQKEDIEKELSKVSRASRGPGLSQHI 229

Query: 363 MVGSLEDVLKKMETNEKGSGWEDLIFIPPGKSRSQHIQEIGK 488
           MVGSLEDVL+KME +EK SGWEDLIFIPPGKS SQHIQE+ K
Sbjct: 230 MVGSLEDVLRKMEMSEKNSGWEDLIFIPPGKSHSQHIQEVAK 271


>ref|XP_002302438.1| predicted protein [Populus trichocarpa] gi|222844164|gb|EEE81711.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  267 bits (682), Expect = 3e-69
 Identities = 132/162 (81%), Positives = 147/162 (90%)
 Frame = +3

Query: 3   LCFRQEDAEAFLSQVRLNKGGIKGHARVVPITLDQVYMLKVEGIAFRFMPDPVQIKNALE 182
           LCFRQEDAEAFL+QVRL +  ++  A+VVPITLDQVYMLKVEGIAFRF+PDPVQIKNALE
Sbjct: 111 LCFRQEDAEAFLAQVRLRRRELRSQAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALE 170

Query: 183 LKASDVKSGFDGVPVFQSDILVVKKKNKRYCPIYFRKEDIEQELSTVSRSVRGSTLSQQI 362
           LKA D++SGFDGVPVFQSD+LVVKKKNKRYCPIYF+KEDIE+ELS VS++ RG +LSQ I
Sbjct: 171 LKAVDIRSGFDGVPVFQSDLLVVKKKNKRYCPIYFQKEDIEKELSKVSKASRGPSLSQHI 230

Query: 363 MVGSLEDVLKKMETNEKGSGWEDLIFIPPGKSRSQHIQEIGK 488
           MVGSLEDVLKKME +EK SGWEDLIFIPPGKS SQHI EI K
Sbjct: 231 MVGSLEDVLKKMEISEKKSGWEDLIFIPPGKSHSQHIHEITK 272


>ref|XP_002326937.1| predicted protein [Populus trichocarpa] gi|222835252|gb|EEE73687.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  267 bits (682), Expect = 3e-69
 Identities = 132/163 (80%), Positives = 148/163 (90%)
 Frame = +3

Query: 3   LCFRQEDAEAFLSQVRLNKGGIKGHARVVPITLDQVYMLKVEGIAFRFMPDPVQIKNALE 182
           LCFRQEDAEAFL+QVRL +  ++  A+VVPITLDQVYMLKVEGIAFRF+PDPVQIKNALE
Sbjct: 111 LCFRQEDAEAFLAQVRLRRRELRSQAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALE 170

Query: 183 LKASDVKSGFDGVPVFQSDILVVKKKNKRYCPIYFRKEDIEQELSTVSRSVRGSTLSQQI 362
           LK++DV+SGFDGVPVFQSD L+VKKK+KRYCP+YF+KEDIE+ELS VSR+ RG  LSQ I
Sbjct: 171 LKSADVRSGFDGVPVFQSDQLIVKKKSKRYCPVYFQKEDIEKELSKVSRASRGPGLSQHI 230

Query: 363 MVGSLEDVLKKMETNEKGSGWEDLIFIPPGKSRSQHIQEIGKA 491
           MVGSLEDVLKKME +EK SGWEDLIFIPPGKS SQHIQEI KA
Sbjct: 231 MVGSLEDVLKKMEISEKNSGWEDLIFIPPGKSHSQHIQEITKA 273


>emb|CBI19527.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  262 bits (670), Expect = 6e-68
 Identities = 129/162 (79%), Positives = 146/162 (90%)
 Frame = +3

Query: 3   LCFRQEDAEAFLSQVRLNKGGIKGHARVVPITLDQVYMLKVEGIAFRFMPDPVQIKNALE 182
           LCFRQEDAEAFL+QV+     ++  ARVVPI+LDQVYMLKVEGIAFRF+PDPVQIKNALE
Sbjct: 55  LCFRQEDAEAFLAQVQSRTRELRSQARVVPISLDQVYMLKVEGIAFRFLPDPVQIKNALE 114

Query: 183 LKASDVKSGFDGVPVFQSDILVVKKKNKRYCPIYFRKEDIEQELSTVSRSVRGSTLSQQI 362
           LKA+D+KSGFDGVPVFQSD+LVVKKKN+RYCPIYF+KEDI +ELS VSRS RG  ++Q I
Sbjct: 115 LKAADIKSGFDGVPVFQSDLLVVKKKNRRYCPIYFQKEDIVKELSKVSRSSRGPGVTQHI 174

Query: 363 MVGSLEDVLKKMETNEKGSGWEDLIFIPPGKSRSQHIQEIGK 488
           MVGSLEDVL+KMET+EK SGWEDLIFIPPGKS SQHIQE+ K
Sbjct: 175 MVGSLEDVLRKMETSEKNSGWEDLIFIPPGKSHSQHIQEVTK 216


>ref|XP_002284687.1| PREDICTED: protein TIC 22, chloroplastic-like isoform 1 [Vitis
           vinifera] gi|359492043|ref|XP_003634356.1| PREDICTED:
           protein TIC 22, chloroplastic-like isoform 2 [Vitis
           vinifera]
          Length = 277

 Score =  262 bits (670), Expect = 6e-68
 Identities = 129/162 (79%), Positives = 146/162 (90%)
 Frame = +3

Query: 3   LCFRQEDAEAFLSQVRLNKGGIKGHARVVPITLDQVYMLKVEGIAFRFMPDPVQIKNALE 182
           LCFRQEDAEAFL+QV+     ++  ARVVPI+LDQVYMLKVEGIAFRF+PDPVQIKNALE
Sbjct: 115 LCFRQEDAEAFLAQVQSRTRELRSQARVVPISLDQVYMLKVEGIAFRFLPDPVQIKNALE 174

Query: 183 LKASDVKSGFDGVPVFQSDILVVKKKNKRYCPIYFRKEDIEQELSTVSRSVRGSTLSQQI 362
           LKA+D+KSGFDGVPVFQSD+LVVKKKN+RYCPIYF+KEDI +ELS VSRS RG  ++Q I
Sbjct: 175 LKAADIKSGFDGVPVFQSDLLVVKKKNRRYCPIYFQKEDIVKELSKVSRSSRGPGVTQHI 234

Query: 363 MVGSLEDVLKKMETNEKGSGWEDLIFIPPGKSRSQHIQEIGK 488
           MVGSLEDVL+KMET+EK SGWEDLIFIPPGKS SQHIQE+ K
Sbjct: 235 MVGSLEDVLRKMETSEKNSGWEDLIFIPPGKSHSQHIQEVTK 276


Top