BLASTX nr result

ID: Bupleurum21_contig00001866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001866
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568902.2| ubiquitin carrier protein 7 [Arabidopsis thalia...   107   3e-33
gb|AAL86003.1| putative E2, ubiquitin-conjugating enzyme UBC7 [A...   107   3e-33
ref|XP_002263503.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   109   3e-33
sp|Q42540.1|UBC7_ARATH RecName: Full=Ubiquitin-conjugating enzym...   107   3e-33
ref|XP_002284116.1| PREDICTED: ubiquitin-conjugating enzyme E2 7...   105   7e-33

>ref|NP_568902.2| ubiquitin carrier protein 7 [Arabidopsis thaliana]
           gi|28973769|gb|AAO64200.1| putative E2,
           ubiquitin-conjugating enzyme UBC7 [Arabidopsis thaliana]
           gi|332009785|gb|AED97168.1| ubiquitin carrier protein 7
           [Arabidopsis thaliana]
          Length = 203

 Score =  107 bits (266), Expect(2) = 3e-33
 Identities = 49/77 (63%), Positives = 55/77 (71%)
 Frame = +3

Query: 3   AIMSFXXXXXXXXXXVRFTSEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWTPVHT 182
           AIM+F          VRFTS+MWHPNVYS+G+VCISILHPPG+DP+GYELASERWTPVHT
Sbjct: 93  AIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHT 152

Query: 183 VEXXXXXXXXXXXXPND 233
           VE            PND
Sbjct: 153 VESIMLSIISMLSGPND 169



 Score = 62.0 bits (149), Expect(2) = 3e-33
 Identities = 26/31 (83%), Positives = 31/31 (100%)
 Frame = +1

Query: 301 ANIDAAKEWRDKKDEFKKKVSRCVRRSQEMY 393
           AN++AAKEWRDK+DEFKKKVSRCVR+SQEM+
Sbjct: 173 ANVEAAKEWRDKRDEFKKKVSRCVRKSQEMF 203


>gb|AAL86003.1| putative E2, ubiquitin-conjugating enzyme UBC7 [Arabidopsis
           thaliana]
          Length = 187

 Score =  107 bits (266), Expect(2) = 3e-33
 Identities = 49/77 (63%), Positives = 55/77 (71%)
 Frame = +3

Query: 3   AIMSFXXXXXXXXXXVRFTSEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWTPVHT 182
           AIM+F          VRFTS+MWHPNVYS+G+VCISILHPPG+DP+GYELASERWTPVHT
Sbjct: 77  AIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHT 136

Query: 183 VEXXXXXXXXXXXXPND 233
           VE            PND
Sbjct: 137 VESIMLSIISMLSGPND 153



 Score = 62.0 bits (149), Expect(2) = 3e-33
 Identities = 26/31 (83%), Positives = 31/31 (100%)
 Frame = +1

Query: 301 ANIDAAKEWRDKKDEFKKKVSRCVRRSQEMY 393
           AN++AAKEWRDK+DEFKKKVSRCVR+SQEM+
Sbjct: 157 ANVEAAKEWRDKRDEFKKKVSRCVRKSQEMF 187


>ref|XP_002263503.1| PREDICTED: ubiquitin-conjugating enzyme E2 13 [Vitis vinifera]
           gi|297740393|emb|CBI30575.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  109 bits (272), Expect(2) = 3e-33
 Identities = 51/77 (66%), Positives = 54/77 (70%)
 Frame = +3

Query: 3   AIMSFXXXXXXXXXXVRFTSEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWTPVHT 182
           AIMSF          VRFTS+MWHPNVY +G+VCISILHPPGEDPNGYELASERWTPVHT
Sbjct: 58  AIMSFPPNYPNSPPSVRFTSDMWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHT 117

Query: 183 VEXXXXXXXXXXXXPND 233
           VE            PND
Sbjct: 118 VESIVLSIISMLSSPND 134



 Score = 59.7 bits (143), Expect(2) = 3e-33
 Identities = 26/30 (86%), Positives = 30/30 (100%)
 Frame = +1

Query: 301 ANIDAAKEWRDKKDEFKKKVSRCVRRSQEM 390
           ANI+AAKEWR+K+DEFKKKVSRCVR+SQEM
Sbjct: 138 ANIEAAKEWREKRDEFKKKVSRCVRKSQEM 167


>sp|Q42540.1|UBC7_ARATH RecName: Full=Ubiquitin-conjugating enzyme E2 7; AltName:
           Full=Ubiquitin carrier protein 7; AltName:
           Full=Ubiquitin-protein ligase 7 gi|992704|gb|AAC49321.1|
           UBC7 [Arabidopsis thaliana] gi|9759251|dbj|BAB09775.1|
           ubiquitin-conjugating enzyme UBC7 [Arabidopsis thaliana]
          Length = 166

 Score =  107 bits (266), Expect(2) = 3e-33
 Identities = 49/77 (63%), Positives = 55/77 (71%)
 Frame = +3

Query: 3   AIMSFXXXXXXXXXXVRFTSEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWTPVHT 182
           AIM+F          VRFTS+MWHPNVYS+G+VCISILHPPG+DP+GYELASERWTPVHT
Sbjct: 56  AIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHT 115

Query: 183 VEXXXXXXXXXXXXPND 233
           VE            PND
Sbjct: 116 VESIMLSIISMLSGPND 132



 Score = 62.0 bits (149), Expect(2) = 3e-33
 Identities = 26/31 (83%), Positives = 31/31 (100%)
 Frame = +1

Query: 301 ANIDAAKEWRDKKDEFKKKVSRCVRRSQEMY 393
           AN++AAKEWRDK+DEFKKKVSRCVR+SQEM+
Sbjct: 136 ANVEAAKEWRDKRDEFKKKVSRCVRKSQEMF 166


>ref|XP_002284116.1| PREDICTED: ubiquitin-conjugating enzyme E2 7 isoform 1 [Vitis
           vinifera]
          Length = 170

 Score =  105 bits (261), Expect(2) = 7e-33
 Identities = 48/77 (62%), Positives = 53/77 (68%)
 Frame = +3

Query: 3   AIMSFXXXXXXXXXXVRFTSEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWTPVHT 182
           AIMSF          V+FTSE+WHPNVY +G+VCISILHPPGEDPNGYELASERW P+HT
Sbjct: 60  AIMSFPPNYPNSPPTVKFTSEVWHPNVYPDGRVCISILHPPGEDPNGYELASERWMPIHT 119

Query: 183 VEXXXXXXXXXXXXPND 233
           VE            PND
Sbjct: 120 VESIVLSIISMLSSPND 136



 Score = 62.4 bits (150), Expect(2) = 7e-33
 Identities = 27/31 (87%), Positives = 31/31 (100%)
 Frame = +1

Query: 301 ANIDAAKEWRDKKDEFKKKVSRCVRRSQEMY 393
           ANI+AAKEWRD++DEFKKKVSRCVRRSQEM+
Sbjct: 140 ANIEAAKEWRDRRDEFKKKVSRCVRRSQEMF 170


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