BLASTX nr result

ID: Bupleurum21_contig00001846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001846
         (1307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-conta...   396   e-108
gb|ABP98986.1| putative ubiquitin associated/TS-N domain-contain...   394   e-107
ref|XP_003554120.1| PREDICTED: uncharacterized protein LOC100805...   379   e-103
ref|XP_003624969.1| Ubiquitin-associated domain-containing prote...   376   e-102
gb|ACJ85071.1| unknown [Medicago truncatula]                          374   e-101

>ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-containing protein 2 isoform 1
            [Vitis vinifera] gi|297741648|emb|CBI32780.3| unnamed
            protein product [Vitis vinifera]
          Length = 294

 Score =  396 bits (1017), Expect = e-108
 Identities = 199/297 (67%), Positives = 236/297 (79%), Gaps = 1/297 (0%)
 Frame = -3

Query: 1251 MNGGPSGFNNAPITRAFVVSCVIFTIVFGIQGRSKNLGISYQDIYKKFQLWKFVVSIFAF 1072
            MNGGPSGF+NA +TRAFV++C +FTI FGIQGR   LG+SYQD++KK QLWK +VS+FAF
Sbjct: 1    MNGGPSGFHNASVTRAFVIACALFTIFFGIQGRPNKLGLSYQDVFKKLQLWKLIVSVFAF 60

Query: 1071 SSTPELMFGAYLLYYFRVFERQISSNKHXXXXXXXXXXXXXXXXXXXXXLKDPSLNPLTS 892
            SSTPELMFG YLLYYFRVFERQI SNK+                      K+P+LN LTS
Sbjct: 61   SSTPELMFGLYLLYYFRVFERQIGSNKYSVFIMFSIIVSLLFEILALSLFKEPTLNLLTS 120

Query: 891  GPYWLIFSAFVPFFFDIPVSTRFRVSRLRFSDKTFIYLAGLQLLLSSWKRSIIPGICGIL 712
            GPY LIFS+FVPF+FDIP+STR+RV  ++F+DK+FIYLAGLQLLLSSWKRSI+PGICGIL
Sbjct: 121  GPYGLIFSSFVPFYFDIPISTRYRVFGIQFTDKSFIYLAGLQLLLSSWKRSILPGICGIL 180

Query: 711  AGSLYRLNVFYIRRLKFPESIASFFSRLSLPSIGSTSSAAQTRNVAGHVPPYAGAAGRQV 532
            AGSLYRLN F+IR++KFPE I+SFFSRLS P+ GS+S+AA +RN+ G+ P Y   AGRQV
Sbjct: 181  AGSLYRLNFFHIRKMKFPEFISSFFSRLSSPATGSSSTAAPSRNILGNAPSY---AGRQV 237

Query: 531  EANH-XXXXXXXXXXXEDSIATLVSMGFDRNAARQALVHARNDINTATNILLESQSH 364
            E N+            ED+IATLVSMGFDRN+ARQALVHARND+N ATNILLE+QSH
Sbjct: 238  EGNYPSSMGAATIEPPEDAIATLVSMGFDRNSARQALVHARNDVNAATNILLEAQSH 294


>gb|ABP98986.1| putative ubiquitin associated/TS-N domain-containing protein
            [Hieracium piloselloides]
          Length = 289

 Score =  394 bits (1011), Expect = e-107
 Identities = 205/296 (69%), Positives = 226/296 (76%)
 Frame = -3

Query: 1251 MNGGPSGFNNAPITRAFVVSCVIFTIVFGIQGRSKNLGISYQDIYKKFQLWKFVVSIFAF 1072
            MNGGPSGFNNAPITR FV++C +FTIVFGIQGRS  LG+SYQDI+KK QLWK VVS+F F
Sbjct: 1    MNGGPSGFNNAPITRTFVIACCLFTIVFGIQGRSNKLGLSYQDIWKKLQLWKLVVSVFTF 60

Query: 1071 SSTPELMFGAYLLYYFRVFERQISSNKHXXXXXXXXXXXXXXXXXXXXXLKDPSLNPLTS 892
            SSTPELMFGAYLLYYFRVFERQI SNK+                     L DP+L+ LTS
Sbjct: 61   SSTPELMFGAYLLYYFRVFERQIGSNKYSVFVTFSIIVSSLLQLFGQAFLNDPTLSVLTS 120

Query: 891  GPYWLIFSAFVPFFFDIPVSTRFRVSRLRFSDKTFIYLAGLQLLLSSWKRSIIPGICGIL 712
            GPY LIFS+FVPF+FDIPVSTRFRVS L FSDK+FIYLAGLQLL SSWKRS+IPG+CGIL
Sbjct: 121  GPYGLIFSSFVPFYFDIPVSTRFRVSTLSFSDKSFIYLAGLQLLFSSWKRSLIPGLCGIL 180

Query: 711  AGSLYRLNVFYIRRLKFPESIASFFSRLSLPSIGSTSSAAQTRNVAGHVPPYAGAAGRQV 532
            AG+LYRLNV  IRR+KFP+ IASFFSRLSLPS+GSTS     RN           A RQV
Sbjct: 181  AGTLYRLNVLRIRRVKFPDFIASFFSRLSLPSVGSTSPVPPARNAPSF-------AARQV 233

Query: 531  EANHXXXXXXXXXXXEDSIATLVSMGFDRNAARQALVHARNDINTATNILLESQSH 364
            E N+           EDSI  LVSMGFDRN+ARQALVHARNDIN ATNILLESQ+H
Sbjct: 234  EGNYRAPMTSGIEPPEDSIEMLVSMGFDRNSARQALVHARNDINAATNILLESQAH 289


>ref|XP_003554120.1| PREDICTED: uncharacterized protein LOC100805217 isoform 1 [Glycine
            max]
          Length = 293

 Score =  379 bits (974), Expect = e-103
 Identities = 192/296 (64%), Positives = 225/296 (76%)
 Frame = -3

Query: 1251 MNGGPSGFNNAPITRAFVVSCVIFTIVFGIQGRSKNLGISYQDIYKKFQLWKFVVSIFAF 1072
            MNGGPSGF NAP+TRAF+++  +FTI FGIQGR   LG+SYQDI+ K +LWK ++SIF+F
Sbjct: 1    MNGGPSGFTNAPVTRAFIITSALFTIFFGIQGRFSTLGLSYQDIFGKLRLWKLIISIFSF 60

Query: 1071 SSTPELMFGAYLLYYFRVFERQISSNKHXXXXXXXXXXXXXXXXXXXXXLKDPSLNPLTS 892
            SSTPELMFG YLLYYFRVFERQI SNK+                     LKDP+ N +T 
Sbjct: 61   SSTPELMFGLYLLYYFRVFERQIGSNKYSVFIVFSILTSLLLEVLAVALLKDPTANLVTP 120

Query: 891  GPYWLIFSAFVPFFFDIPVSTRFRVSRLRFSDKTFIYLAGLQLLLSSWKRSIIPGICGIL 712
            GPY LIF++F+PFFFDIPVSTRFRV    FSDK+FIYLAGLQLLLSSWKRSI+PG+CGIL
Sbjct: 121  GPYGLIFASFLPFFFDIPVSTRFRVFSFLFSDKSFIYLAGLQLLLSSWKRSILPGMCGIL 180

Query: 711  AGSLYRLNVFYIRRLKFPESIASFFSRLSLPSIGSTSSAAQTRNVAGHVPPYAGAAGRQV 532
            AGSLYRLNVFYIR+ KFPE I+SFFSR+ LPS+GS  + +  RNV G++P Y     RQ+
Sbjct: 181  AGSLYRLNVFYIRKAKFPEMISSFFSRILLPSMGSPRAPSSARNVVGNLPSY---PARQM 237

Query: 531  EANHXXXXXXXXXXXEDSIATLVSMGFDRNAARQALVHARNDINTATNILLESQSH 364
            E N+           EDSI TLVSMGFDRN+ARQALV ARND+N ATNILLE+QSH
Sbjct: 238  ERNYPAPMQAAVEPTEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 293


>ref|XP_003624969.1| Ubiquitin-associated domain-containing protein [Medicago truncatula]
            gi|355499984|gb|AES81187.1| Ubiquitin-associated
            domain-containing protein [Medicago truncatula]
          Length = 292

 Score =  376 bits (965), Expect = e-102
 Identities = 191/296 (64%), Positives = 223/296 (75%)
 Frame = -3

Query: 1251 MNGGPSGFNNAPITRAFVVSCVIFTIVFGIQGRSKNLGISYQDIYKKFQLWKFVVSIFAF 1072
            MNGGPSGF NAP+TRAF+++  +FTI FGIQGR   LG+SYQDI+ K ++WK ++S+F+F
Sbjct: 1    MNGGPSGFTNAPVTRAFIIASALFTIFFGIQGRFNTLGLSYQDIFGKLRIWKLIMSVFSF 60

Query: 1071 SSTPELMFGAYLLYYFRVFERQISSNKHXXXXXXXXXXXXXXXXXXXXXLKDPSLNPLTS 892
            +STPELMFG YLLYYFRVFERQI SNKH                     LKDPS   +T 
Sbjct: 61   TSTPELMFGLYLLYYFRVFERQIGSNKHSVFIVFSMLTSLLFEVVAVALLKDPSTTLVTP 120

Query: 891  GPYWLIFSAFVPFFFDIPVSTRFRVSRLRFSDKTFIYLAGLQLLLSSWKRSIIPGICGIL 712
            GPY LIF++FVPFFFDIPVSTRFR+    FSDK+FIYLAGLQLLLS WKRS++PG+CGIL
Sbjct: 121  GPYGLIFASFVPFFFDIPVSTRFRICGFHFSDKSFIYLAGLQLLLSKWKRSMLPGMCGIL 180

Query: 711  AGSLYRLNVFYIRRLKFPESIASFFSRLSLPSIGSTSSAAQTRNVAGHVPPYAGAAGRQV 532
            AGSLYRLNVFYIR+ KFPE I+SFFSR+SLPS+G T     TRNV G+VP Y     RQ+
Sbjct: 181  AGSLYRLNVFYIRKAKFPEFISSFFSRISLPSMG-TPRTTSTRNVMGNVPSY---PARQM 236

Query: 531  EANHXXXXXXXXXXXEDSIATLVSMGFDRNAARQALVHARNDINTATNILLESQSH 364
            E N+           EDSI TLVSMGFDRN+ARQALV ARND+N ATNILLE+QSH
Sbjct: 237  ERNYPAPTHSAVEPSEDSIITLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 292


>gb|ACJ85071.1| unknown [Medicago truncatula]
          Length = 292

 Score =  374 bits (960), Expect = e-101
 Identities = 190/296 (64%), Positives = 222/296 (75%)
 Frame = -3

Query: 1251 MNGGPSGFNNAPITRAFVVSCVIFTIVFGIQGRSKNLGISYQDIYKKFQLWKFVVSIFAF 1072
            MNGGPSGF NAP+TRAF+++  +FTI FGIQGR   LG+SYQDI+ K ++WK ++S+F+F
Sbjct: 1    MNGGPSGFTNAPVTRAFIIASALFTIFFGIQGRFNTLGLSYQDIFGKLRIWKLIMSVFSF 60

Query: 1071 SSTPELMFGAYLLYYFRVFERQISSNKHXXXXXXXXXXXXXXXXXXXXXLKDPSLNPLTS 892
            +STPELMFG YLLYYFRVFERQI SNKH                     LKDPS   +T 
Sbjct: 61   TSTPELMFGLYLLYYFRVFERQIGSNKHSVFIVFSMLTSLLFEVVAVALLKDPSTTLVTP 120

Query: 891  GPYWLIFSAFVPFFFDIPVSTRFRVSRLRFSDKTFIYLAGLQLLLSSWKRSIIPGICGIL 712
            GPY LIF++FVPFFFDIPVSTRFR+    FSDK+FIYLAGLQLLLS WKRS++PG+CGIL
Sbjct: 121  GPYGLIFASFVPFFFDIPVSTRFRICGFHFSDKSFIYLAGLQLLLSKWKRSMLPGMCGIL 180

Query: 711  AGSLYRLNVFYIRRLKFPESIASFFSRLSLPSIGSTSSAAQTRNVAGHVPPYAGAAGRQV 532
            AGSLYRLNVFYIR+ KFPE I+SFFSR+SLPS+G T     TRNV G+VP Y     RQ+
Sbjct: 181  AGSLYRLNVFYIRKAKFPEFISSFFSRISLPSMG-TPRTTSTRNVMGNVPSY---PARQM 236

Query: 531  EANHXXXXXXXXXXXEDSIATLVSMGFDRNAARQALVHARNDINTATNILLESQSH 364
            E N+           EDSI TLVSMGFDRN+ARQALV ARND+N ATNILLE+Q H
Sbjct: 237  ERNYPAPTHSAVEPSEDSIITLVSMGFDRNSARQALVQARNDVNVATNILLEAQPH 292


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