BLASTX nr result

ID: Bupleurum21_contig00001830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001830
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283652.1| PREDICTED: peroxiredoxin-2E, chloroplastic [...   296   7e-78
ref|XP_004137869.1| PREDICTED: peroxiredoxin-2E, chloroplastic-l...   288   2e-75
gb|ABK92641.1| unknown [Populus trichocarpa]                          285   2e-74
ref|XP_004170539.1| PREDICTED: peroxiredoxin-2E, chloroplastic-l...   284   3e-74
gb|AFK42485.1| unknown [Medicago truncatula]                          284   3e-74

>ref|XP_002283652.1| PREDICTED: peroxiredoxin-2E, chloroplastic [Vitis vinifera]
            gi|342160852|gb|AEL16462.1| type II peroxiredoxin E
            [Vitis vinifera]
          Length = 212

 Score =  296 bits (758), Expect = 7e-78
 Identities = 161/213 (75%), Positives = 180/213 (84%)
 Frame = -2

Query: 1065 RLISSHKSSLVPLKSSVIATKPFSFLPLKLKSNTFPKPLTAFSTSAGKISATIAVGDTLP 886
            RL+SS KS  +   SS  A  P + L LKL+    PKPL  FST+   ISATIAVGD LP
Sbjct: 9    RLLSSAKS--LSFSSSASALFPPASLSLKLRH---PKPLR-FSTA---ISATIAVGDKLP 59

Query: 885  ESTFSYFDSAGELKTTTVSDLTKSKKTIFFAVPGAFTPTCSQKHVPGFVSKSSELKAKGV 706
            ESTFSYFDSAGEL+TTTVSDLTK KK I FAVPGAFTPTCSQKH+PGFV KS ELK+KGV
Sbjct: 60   ESTFSYFDSAGELQTTTVSDLTKGKKAILFAVPGAFTPTCSQKHLPGFVEKSGELKSKGV 119

Query: 705  DTIACVSVNDAFVMKAWKAELGVGDEVLMLSDGNGNFTKAIGVELDLSDQPVGLGVRSRR 526
            +TIAC+SVNDAFVMKAWKA+L + D+VL+LSDGNG+FTKAIG ELDLSD+PVGLGVRSRR
Sbjct: 120  ETIACISVNDAFVMKAWKADLKIEDQVLLLSDGNGDFTKAIGCELDLSDKPVGLGVRSRR 179

Query: 525  YAMLVDDGVVKVLNLEEGGAFTSSSADDMLKVL 427
            YAMLVDDGVVKVLNLEEGGAFT S A+D+LK+L
Sbjct: 180  YAMLVDDGVVKVLNLEEGGAFTFSGAEDILKLL 212


>ref|XP_004137869.1| PREDICTED: peroxiredoxin-2E, chloroplastic-like [Cucumis sativus]
          Length = 229

 Score =  288 bits (737), Expect = 2e-75
 Identities = 146/193 (75%), Positives = 164/193 (84%), Gaps = 2/193 (1%)
 Frame = -2

Query: 999 FSFLPLKLKSNTFPKPLTAFSTSAGK--ISATIAVGDTLPESTFSYFDSAGELKTTTVSD 826
           FS LP        PKPL   S+ A K  ISATI+VGD LPESTFSY DSAGEL+TTTVSD
Sbjct: 37  FSSLPFNSLRRLSPKPLRFSSSPASKSTISATISVGDKLPESTFSYLDSAGELQTTTVSD 96

Query: 825 LTKSKKTIFFAVPGAFTPTCSQKHVPGFVSKSSELKAKGVDTIACVSVNDAFVMKAWKAE 646
           LTK KK +FFAVPGAFTPTCSQKH+PGFV KS++LKAKGVDTIAC+SVNDAFVMKAWK  
Sbjct: 97  LTKGKKAVFFAVPGAFTPTCSQKHLPGFVEKSADLKAKGVDTIACISVNDAFVMKAWKDN 156

Query: 645 LGVGDEVLMLSDGNGNFTKAIGVELDLSDQPVGLGVRSRRYAMLVDDGVVKVLNLEEGGA 466
           L + DEVL+LSDGNG+FT+AIG ELDLSD+PVGLGVRSRRYA+L +DGVVK+LNLEEGGA
Sbjct: 157 LNIKDEVLLLSDGNGDFTRAIGCELDLSDKPVGLGVRSRRYALLAEDGVVKILNLEEGGA 216

Query: 465 FTSSSADDMLKVL 427
           FT SSA+D+LK L
Sbjct: 217 FTFSSAEDILKAL 229


>gb|ABK92641.1| unknown [Populus trichocarpa]
          Length = 218

 Score =  285 bits (729), Expect = 2e-74
 Identities = 147/204 (72%), Positives = 167/204 (81%), Gaps = 2/204 (0%)
 Frame = -2

Query: 1032 PLKSSVIATKPFSFLP-LKLKSNTFPKPLTAFSTSAGKISATIAVGDTLPESTFSYFDSA 856
            P + S  A    SFL  L LK N  PKPL   +     ISATI+VGD LPE+T SYFDS 
Sbjct: 15   PTQISTTAATAKSFLSSLPLKPNRLPKPLRTTTRKFSTISATISVGDKLPEATLSYFDSE 74

Query: 855  GELKTTTVSDLTKSKKTIFFAVPGAFTPTCSQKHVPGFVSKSSELKAKGVDTIACVSVND 676
            GEL+TTT+S LT  KK+I FAVPGAFTPTCSQKH+PGFV KS+ELK+KGVDTIAC+SVND
Sbjct: 75   GELQTTTISSLTSGKKSILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDTIACISVND 134

Query: 675  AFVMKAWKAELGVGDE-VLMLSDGNGNFTKAIGVELDLSDQPVGLGVRSRRYAMLVDDGV 499
            AFVMKAWK +LG+ D+ VL+LSDGNG+FTKAIG ELDLSD+PVGLGVRSRRYA+L +DGV
Sbjct: 135  AFVMKAWKEDLGIKDDGVLLLSDGNGDFTKAIGCELDLSDKPVGLGVRSRRYALLAEDGV 194

Query: 498  VKVLNLEEGGAFTSSSADDMLKVL 427
            VKVLNLEEGGAFTSS A+DMLK L
Sbjct: 195  VKVLNLEEGGAFTSSGAEDMLKAL 218


>ref|XP_004170539.1| PREDICTED: peroxiredoxin-2E, chloroplastic-like [Cucumis sativus]
          Length = 229

 Score =  284 bits (727), Expect = 3e-74
 Identities = 145/193 (75%), Positives = 163/193 (84%), Gaps = 2/193 (1%)
 Frame = -2

Query: 999 FSFLPLKLKSNTFPKPLTAFSTSAGK--ISATIAVGDTLPESTFSYFDSAGELKTTTVSD 826
           FS LP         KPL   S+ A K  ISATI+VGD LPESTFSY DSAGEL+TTTVSD
Sbjct: 37  FSSLPFNSLRRLSLKPLRFSSSPASKSTISATISVGDKLPESTFSYLDSAGELQTTTVSD 96

Query: 825 LTKSKKTIFFAVPGAFTPTCSQKHVPGFVSKSSELKAKGVDTIACVSVNDAFVMKAWKAE 646
           LTK KK +FFAVPGAFTPTCSQKH+PGFV KS++LKAKGVDTIAC+SVNDAFVMKAWK  
Sbjct: 97  LTKGKKAVFFAVPGAFTPTCSQKHLPGFVEKSADLKAKGVDTIACISVNDAFVMKAWKDN 156

Query: 645 LGVGDEVLMLSDGNGNFTKAIGVELDLSDQPVGLGVRSRRYAMLVDDGVVKVLNLEEGGA 466
           L + DEVL+LSDGNG+FT+AIG ELDLSD+PVGLGVRSRRYA+L +DGVVK+LNLEEGGA
Sbjct: 157 LNIKDEVLLLSDGNGDFTRAIGCELDLSDKPVGLGVRSRRYALLAEDGVVKILNLEEGGA 216

Query: 465 FTSSSADDMLKVL 427
           FT SSA+D+LK L
Sbjct: 217 FTFSSAEDILKAL 229


>gb|AFK42485.1| unknown [Medicago truncatula]
          Length = 217

 Score =  284 bits (727), Expect = 3e-74
 Identities = 149/212 (70%), Positives = 172/212 (81%)
 Frame = -2

Query: 1062 LISSHKSSLVPLKSSVIATKPFSFLPLKLKSNTFPKPLTAFSTSAGKISATIAVGDTLPE 883
            L SS  +SL+  K+  +++       L LK N F      FS+S  KISATI+VGD LPE
Sbjct: 11   LSSSTTTSLLSPKTKTLSSN----FTLPLKFNRFNSKPLRFSSSP-KISATISVGDKLPE 65

Query: 882  STFSYFDSAGELKTTTVSDLTKSKKTIFFAVPGAFTPTCSQKHVPGFVSKSSELKAKGVD 703
            STFSY D AGE++T TVSDLTK KK + FAVPGAFTPTCSQKHVPGFV KS+ELKAKG+D
Sbjct: 66   STFSYLDPAGEVQTITVSDLTKGKKAVLFAVPGAFTPTCSQKHVPGFVEKSAELKAKGID 125

Query: 702  TIACVSVNDAFVMKAWKAELGVGDEVLMLSDGNGNFTKAIGVELDLSDQPVGLGVRSRRY 523
            TIAC+SVNDAFVMKAWK +L V DEV++LSDGNG+FTKAIGVELDLSD+PVGLGVRSRRY
Sbjct: 126  TIACISVNDAFVMKAWKEDLKVNDEVVLLSDGNGDFTKAIGVELDLSDKPVGLGVRSRRY 185

Query: 522  AMLVDDGVVKVLNLEEGGAFTSSSADDMLKVL 427
            A+L +DGVVK+ NLEEGGAFT S ADD+LKVL
Sbjct: 186  ALLAEDGVVKLFNLEEGGAFTFSGADDILKVL 217


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