BLASTX nr result
ID: Bupleurum21_contig00001816
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00001816
(1001 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524567.1| cell cycle regulatory protein, putative [Ric... 181 2e-45
ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|2... 182 3e-45
ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein lig... 171 2e-43
emb|CBI28495.3| unnamed protein product [Vitis vinifera] 171 2e-43
gb|AFK37461.1| unknown [Lotus japonicus] 167 3e-41
>ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis]
gi|223536120|gb|EEF37775.1| cell cycle regulatory
protein, putative [Ricinus communis]
Length = 441
Score = 181 bits (458), Expect(2) = 2e-45
Identities = 88/138 (63%), Positives = 106/138 (76%)
Frame = -1
Query: 923 LGFRDYMTVMGSDSYEXXXXXXXXXXXXXXXAGHYHSLAVTSQGQLWAWGRNNEAQLGRG 744
LG + +T +G+D+YE AGHYHSLAVTS GQLWAWGRNNEAQLGR
Sbjct: 43 LGLPNSLTGLGTDAYEPTIVSGLPSDIVGVTAGHYHSLAVTSTGQLWAWGRNNEAQLGRC 102
Query: 743 LESPRGTWYEPKRVEGLDQVVVQNAFASGVISVAIGVDGSMWVWGKSKRGQLGLGKGITE 564
+ +PR TW EPKRVEGL++V + +A+ASGV+S AI DGS+WVWGKSKRGQLGLGKGITE
Sbjct: 103 IPAPRDTWNEPKRVEGLNKVHILSAYASGVVSAAIANDGSLWVWGKSKRGQLGLGKGITE 162
Query: 563 AIVPTRVEVLAGEEIAKV 510
A VP+++E LAG +IAKV
Sbjct: 163 AFVPSKIEALAGTKIAKV 180
Score = 28.9 bits (63), Expect(2) = 2e-45
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2
Query: 499 IFKVSLGWGHALALT 455
I KVS GWGHALAL+
Sbjct: 177 IAKVSFGWGHALALS 191
Score = 57.4 bits (137), Expect = 5e-06
Identities = 35/93 (37%), Positives = 49/93 (52%)
Frame = -1
Query: 782 AWGRNNEAQLGRGLESPRGTWYEPKRVEGLDQVVVQNAFASGVISVAIGVDGSMWVWGKS 603
+WG N +QLGR P G P +EGL + + V S+A+ G +WVWG
Sbjct: 344 SWGWNQSSQLGR--LGPEGI---PLEIEGLAGEIPVSVSGGRVHSIALTSKGEVWVWGCG 398
Query: 602 KRGQLGLGKGITEAIVPTRVEVLAGEEIAKVVS 504
K G+LGLG EA P ++ L G E+ ++VS
Sbjct: 399 KNGRLGLGSSSDEA-EPILLDSLEGYEVLQIVS 430
>ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|222861317|gb|EEE98859.1|
predicted protein [Populus trichocarpa]
Length = 413
Score = 182 bits (463), Expect(2) = 3e-45
Identities = 93/138 (67%), Positives = 102/138 (73%)
Frame = -1
Query: 923 LGFRDYMTVMGSDSYEXXXXXXXXXXXXXXXAGHYHSLAVTSQGQLWAWGRNNEAQLGRG 744
LG + G D+YE AGHYHSLAVTS GQLWAWGRN+E QLGRG
Sbjct: 11 LGLPTSLIGHGMDAYEPTPVTGLPSDITSVSAGHYHSLAVTSHGQLWAWGRNHEVQLGRG 70
Query: 743 LESPRGTWYEPKRVEGLDQVVVQNAFASGVISVAIGVDGSMWVWGKSKRGQLGLGKGITE 564
L SPR TW EPKRVEGLDQV V AFASGV+S AIG DGS+WVWGKSKRGQLGLGKGITE
Sbjct: 71 LLSPRDTWNEPKRVEGLDQVQVTAAFASGVVSAAIGDDGSLWVWGKSKRGQLGLGKGITE 130
Query: 563 AIVPTRVEVLAGEEIAKV 510
A VP++VE L G++IAKV
Sbjct: 131 ASVPSKVEALEGQKIAKV 148
Score = 26.6 bits (57), Expect(2) = 3e-45
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 499 IFKVSLGWGHALALT 455
I KVS GWGH LA T
Sbjct: 145 IAKVSFGWGHTLAQT 159
>ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 432
Score = 171 bits (434), Expect(2) = 2e-43
Identities = 85/138 (61%), Positives = 101/138 (73%)
Frame = -1
Query: 923 LGFRDYMTVMGSDSYEXXXXXXXXXXXXXXXAGHYHSLAVTSQGQLWAWGRNNEAQLGRG 744
LG + +G D+YE AGHYHSLAVT+QG++WAWGRN+E QLGRG
Sbjct: 34 LGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAVTAQGEVWAWGRNHEGQLGRG 93
Query: 743 LESPRGTWYEPKRVEGLDQVVVQNAFASGVISVAIGVDGSMWVWGKSKRGQLGLGKGITE 564
L +PR +W P RVEGL+QV V+ AFASGVIS AIG DGS+WVWGKSK GQLGLGKGI+E
Sbjct: 94 LLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGSLWVWGKSKHGQLGLGKGISE 153
Query: 563 AIVPTRVEVLAGEEIAKV 510
+VP+RVE LA E+I KV
Sbjct: 154 TVVPSRVEALAREKIVKV 171
Score = 31.2 bits (69), Expect(2) = 2e-43
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -2
Query: 499 IFKVSLGWGHALALT*DAQ 443
I KVSLGWGHALA T D +
Sbjct: 168 IVKVSLGWGHALAQTEDGK 186
>emb|CBI28495.3| unnamed protein product [Vitis vinifera]
Length = 426
Score = 171 bits (434), Expect(2) = 2e-43
Identities = 85/138 (61%), Positives = 101/138 (73%)
Frame = -1
Query: 923 LGFRDYMTVMGSDSYEXXXXXXXXXXXXXXXAGHYHSLAVTSQGQLWAWGRNNEAQLGRG 744
LG + +G D+YE AGHYHSLAVT+QG++WAWGRN+E QLGRG
Sbjct: 28 LGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAVTAQGEVWAWGRNHEGQLGRG 87
Query: 743 LESPRGTWYEPKRVEGLDQVVVQNAFASGVISVAIGVDGSMWVWGKSKRGQLGLGKGITE 564
L +PR +W P RVEGL+QV V+ AFASGVIS AIG DGS+WVWGKSK GQLGLGKGI+E
Sbjct: 88 LLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGSLWVWGKSKHGQLGLGKGISE 147
Query: 563 AIVPTRVEVLAGEEIAKV 510
+VP+RVE LA E+I KV
Sbjct: 148 TVVPSRVEALAREKIVKV 165
Score = 31.2 bits (69), Expect(2) = 2e-43
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -2
Query: 499 IFKVSLGWGHALALT*DAQ 443
I KVSLGWGHALA T D +
Sbjct: 162 IVKVSLGWGHALAQTEDGK 180
>gb|AFK37461.1| unknown [Lotus japonicus]
Length = 433
Score = 167 bits (422), Expect(2) = 3e-41
Identities = 82/138 (59%), Positives = 96/138 (69%)
Frame = -1
Query: 923 LGFRDYMTVMGSDSYEXXXXXXXXXXXXXXXAGHYHSLAVTSQGQLWAWGRNNEAQLGRG 744
LG +G D+YE AGHYHSLAVTSQG LWAWGRNNEAQLG G
Sbjct: 38 LGLPSSAVGVGLDAYEPTPIPSLPSDIVSVHAGHYHSLAVTSQGHLWAWGRNNEAQLGPG 97
Query: 743 LESPRGTWYEPKRVEGLDQVVVQNAFASGVISVAIGVDGSMWVWGKSKRGQLGLGKGITE 564
S R +W EPK V GL+ V V A+ASGV+S A+G DGS+WVWGKSKRGQLGLGKG+TE
Sbjct: 98 FSSSRESWNEPKMVVGLENVKVCAAYASGVVSAAVGDDGSVWVWGKSKRGQLGLGKGVTE 157
Query: 563 AIVPTRVEVLAGEEIAKV 510
A+ P ++E L+GE +AKV
Sbjct: 158 AVAPAKLEALSGENVAKV 175
Score = 28.9 bits (63), Expect(2) = 3e-41
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2
Query: 499 IFKVSLGWGHALALT*DAQ 443
+ KVS GWGHALA T D +
Sbjct: 172 VAKVSFGWGHALAQTVDGK 190