BLASTX nr result

ID: Bupleurum21_contig00001805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001805
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   158   5e-37
ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   157   1e-36
ref|XP_002866477.1| hypothetical protein ARALYDRAFT_496396 [Arab...   155   3e-36
ref|NP_201025.1| DEAD-box ATP-dependent RNA helicase 7 [Arabidop...   155   5e-36
emb|CAA68194.1| RNA helicase [Arabidopsis thaliana]                   155   5e-36

>ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
          Length = 697

 Score =  158 bits (400), Expect = 5e-37
 Identities = 78/95 (82%), Positives = 86/95 (90%)
 Frame = +3

Query: 279 DNPNAVSNFRISEPLRNKLKANGIEALFPIQAMTFDTILDGFDLVGRARTGQGKTLAFVL 458
           D+PNA+SNFRISEPLR KLK  GIE+LFPIQAMTFDT+LDG DLVGRARTGQGKTLAFVL
Sbjct: 115 DDPNAISNFRISEPLREKLKEKGIESLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVL 174

Query: 459 PILEALTNGAFKNSRPTGYGRAPSVIVLLPTRELA 563
           PILE+L NG  K++R TGYGR PSV+VLLPTRELA
Sbjct: 175 PILESLINGPAKSARKTGYGRTPSVLVLLPTRELA 209


>ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Vitis
           vinifera]
          Length = 711

 Score =  157 bits (397), Expect = 1e-36
 Identities = 79/95 (83%), Positives = 85/95 (89%)
 Frame = +3

Query: 279 DNPNAVSNFRISEPLRNKLKANGIEALFPIQAMTFDTILDGFDLVGRARTGQGKTLAFVL 458
           +NPNA+SNFRISEPLR KLK+ GIEALFPIQAMTFDTILDG DLVGRARTGQGKTLAFVL
Sbjct: 116 ENPNALSNFRISEPLREKLKSKGIEALFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVL 175

Query: 459 PILEALTNGAFKNSRPTGYGRAPSVIVLLPTRELA 563
           PILE+L NG  + SR TGYGR P V+VLLPTRELA
Sbjct: 176 PILESLINGPNRGSRKTGYGRPPCVLVLLPTRELA 210


>ref|XP_002866477.1| hypothetical protein ARALYDRAFT_496396 [Arabidopsis lyrata subsp.
           lyrata] gi|297312312|gb|EFH42736.1| hypothetical protein
           ARALYDRAFT_496396 [Arabidopsis lyrata subsp. lyrata]
          Length = 669

 Score =  155 bits (393), Expect = 3e-36
 Identities = 79/95 (83%), Positives = 82/95 (86%)
 Frame = +3

Query: 279 DNPNAVSNFRISEPLRNKLKANGIEALFPIQAMTFDTILDGFDLVGRARTGQGKTLAFVL 458
           DNPNAVSNFRIS PLR KLKA GIEALFPIQA TFD +LDG DLVGRARTGQGKTLAFVL
Sbjct: 93  DNPNAVSNFRISAPLREKLKAKGIEALFPIQATTFDMVLDGADLVGRARTGQGKTLAFVL 152

Query: 459 PILEALTNGAFKNSRPTGYGRAPSVIVLLPTRELA 563
           PILE+L NG  KN R  GY RAPSV+VLLPTRELA
Sbjct: 153 PILESLVNGPAKNKRKMGYARAPSVLVLLPTRELA 187


>ref|NP_201025.1| DEAD-box ATP-dependent RNA helicase 7 [Arabidopsis thaliana]
           gi|108861902|sp|Q39189.2|RH7_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 7
           gi|8809632|dbj|BAA97183.1| RNA helicase [Arabidopsis
           thaliana] gi|15810145|gb|AAL07216.1| putative RNA
           helicase [Arabidopsis thaliana]
           gi|30793911|gb|AAP40408.1| putative DEAD/DEAH box RNA
           helicase PRH75 [Arabidopsis thaliana]
           gi|332010196|gb|AED97579.1| DEAD-box ATP-dependent RNA
           helicase 7 [Arabidopsis thaliana]
          Length = 671

 Score =  155 bits (391), Expect = 5e-36
 Identities = 78/95 (82%), Positives = 83/95 (87%)
 Frame = +3

Query: 279 DNPNAVSNFRISEPLRNKLKANGIEALFPIQAMTFDTILDGFDLVGRARTGQGKTLAFVL 458
           DNPNAVS FRIS PLR KLKANGIEALFPIQA TFD +LDG DLVGRARTGQGKTLAFVL
Sbjct: 93  DNPNAVSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVL 152

Query: 459 PILEALTNGAFKNSRPTGYGRAPSVIVLLPTRELA 563
           PILE+L NG  K+ R  GYGR+PSV+VLLPTRELA
Sbjct: 153 PILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELA 187


>emb|CAA68194.1| RNA helicase [Arabidopsis thaliana]
          Length = 671

 Score =  155 bits (391), Expect = 5e-36
 Identities = 78/95 (82%), Positives = 83/95 (87%)
 Frame = +3

Query: 279 DNPNAVSNFRISEPLRNKLKANGIEALFPIQAMTFDTILDGFDLVGRARTGQGKTLAFVL 458
           DNPNAVS FRIS PLR KLKANGIEALFPIQA TFD +LDG DLVGRARTGQGKTLAFVL
Sbjct: 93  DNPNAVSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVL 152

Query: 459 PILEALTNGAFKNSRPTGYGRAPSVIVLLPTRELA 563
           PILE+L NG  K+ R  GYGR+PSV+VLLPTRELA
Sbjct: 153 PILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELA 187


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