BLASTX nr result

ID: Bupleurum21_contig00001801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001801
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278951.1| PREDICTED: probable alanyl-tRNA synthetase, ...   161   4e-38
ref|NP_680210.2| alanyl-tRNA synthetase [Arabidopsis thaliana] g...   153   2e-35
dbj|BAB10601.1| alanyl-tRNA synthetase [Arabidopsis thaliana]         153   2e-35
ref|XP_002874093.1| aminoacyl-tRNA synthetase family protein [Ar...   151   5e-35
ref|XP_002313683.1| predicted protein [Populus trichocarpa] gi|3...   150   8e-35

>ref|XP_002278951.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic [Vitis
           vinifera] gi|297744517|emb|CBI37779.3| unnamed protein
           product [Vitis vinifera]
          Length = 1006

 Score =  161 bits (408), Expect = 4e-38
 Identities = 82/115 (71%), Positives = 98/115 (85%), Gaps = 1/115 (0%)
 Frame = -2

Query: 344 HSVNTGTQHKQSITRTKSATIQPMTGEVMAE-SQDDSTSGDSIRRRFLEFYALRGHRVLP 168
           HS    T+  +  TR+ SA+IQPMT E++ + S+D  TSGDSIR RFL+FYA RGH+VLP
Sbjct: 70  HSNLKQTREVRFTTRSTSASIQPMTEELVEDKSKDLPTSGDSIRHRFLDFYASRGHKVLP 129

Query: 167 SSSLVPDDPTVLLTIAGMLQFKPIFLGQVPREVPRAATSQKCIRTNDIENVGRTS 3
           SSSLVPDDPTVLLTIAGMLQFKPIFLG+VPR+VPRA T+Q+CIRTND+ENVG+TS
Sbjct: 130 SSSLVPDDPTVLLTIAGMLQFKPIFLGKVPRQVPRATTAQRCIRTNDVENVGKTS 184


>ref|NP_680210.2| alanyl-tRNA synthetase [Arabidopsis thaliana]
           gi|322510075|sp|Q9FFC7.2|SYAP_ARATH RecName:
           Full=Probable alanine--tRNA ligase, chloroplastic;
           AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS;
           AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName:
           Full=Protein EMBRYO DEFECTIVE 263; AltName: Full=Protein
           EMBRYO DEFECTIVE 86; Flags: Precursor
           gi|332005698|gb|AED93081.1| alanyl-tRNA synthetase
           [Arabidopsis thaliana]
          Length = 978

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/108 (67%), Positives = 90/108 (83%)
 Frame = -2

Query: 326 TQHKQSITRTKSATIQPMTGEVMAESQDDSTSGDSIRRRFLEFYALRGHRVLPSSSLVPD 147
           TQ  Q I ++ S ++QP++ +   + Q    SGDSIRRRFLEF+A RGH+VLPSSSLVP+
Sbjct: 48  TQSPQIIAKSSSVSVQPVSEDAKEDYQSKDVSGDSIRRRFLEFFASRGHKVLPSSSLVPE 107

Query: 146 DPTVLLTIAGMLQFKPIFLGQVPREVPRAATSQKCIRTNDIENVGRTS 3
           DPTVLLTIAGMLQFKPIFLG+VPREVP A T+Q+CIRTND+ENVG+T+
Sbjct: 108 DPTVLLTIAGMLQFKPIFLGKVPREVPCATTAQRCIRTNDLENVGKTA 155


>dbj|BAB10601.1| alanyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 954

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/108 (67%), Positives = 90/108 (83%)
 Frame = -2

Query: 326 TQHKQSITRTKSATIQPMTGEVMAESQDDSTSGDSIRRRFLEFYALRGHRVLPSSSLVPD 147
           TQ  Q I ++ S ++QP++ +   + Q    SGDSIRRRFLEF+A RGH+VLPSSSLVP+
Sbjct: 24  TQSPQIIAKSSSVSVQPVSEDAKEDYQSKDVSGDSIRRRFLEFFASRGHKVLPSSSLVPE 83

Query: 146 DPTVLLTIAGMLQFKPIFLGQVPREVPRAATSQKCIRTNDIENVGRTS 3
           DPTVLLTIAGMLQFKPIFLG+VPREVP A T+Q+CIRTND+ENVG+T+
Sbjct: 84  DPTVLLTIAGMLQFKPIFLGKVPREVPCATTAQRCIRTNDLENVGKTA 131


>ref|XP_002874093.1| aminoacyl-tRNA synthetase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297319930|gb|EFH50352.1| aminoacyl-tRNA
           synthetase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 978

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/108 (66%), Positives = 90/108 (83%)
 Frame = -2

Query: 326 TQHKQSITRTKSATIQPMTGEVMAESQDDSTSGDSIRRRFLEFYALRGHRVLPSSSLVPD 147
           TQ  Q I ++ S ++QP++ +   + Q    SGDSIRRRFLEF+A RGH+VLPS+SLVP+
Sbjct: 48  TQSAQIIAKSSSVSLQPVSEDAKEDYQSKDVSGDSIRRRFLEFFASRGHKVLPSASLVPE 107

Query: 146 DPTVLLTIAGMLQFKPIFLGQVPREVPRAATSQKCIRTNDIENVGRTS 3
           DPTVLLTIAGMLQFKPIFLG+VPREVP A T+Q+CIRTND+ENVG+T+
Sbjct: 108 DPTVLLTIAGMLQFKPIFLGKVPREVPCATTAQRCIRTNDLENVGKTA 155


>ref|XP_002313683.1| predicted protein [Populus trichocarpa]
           gi|313471500|sp|B9HQZ6.1|SYAP_POPTR RecName:
           Full=Probable alanine--tRNA ligase, chloroplastic;
           AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS
           gi|222850091|gb|EEE87638.1| predicted protein [Populus
           trichocarpa]
          Length = 994

 Score =  150 bits (380), Expect = 8e-35
 Identities = 72/110 (65%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
 Frame = -2

Query: 329 GTQHKQSITRTKSATIQPMTGEVMAE-SQDDSTSGDSIRRRFLEFYALRGHRVLPSSSLV 153
           G + ++   R   A++QP+T E++ + ++++  SGD+IRRRFLEFYA R H+VLPS+SLV
Sbjct: 66  GARERRFGARNTQASVQPVTEELVEDKTKENPVSGDAIRRRFLEFYASRSHKVLPSASLV 125

Query: 152 PDDPTVLLTIAGMLQFKPIFLGQVPREVPRAATSQKCIRTNDIENVGRTS 3
           PDDPTVLLTIAGMLQFKPIFLG+ PR+VPRA T+QKCIRTND+ENVGRT+
Sbjct: 126 PDDPTVLLTIAGMLQFKPIFLGKAPRQVPRATTAQKCIRTNDVENVGRTT 175


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