BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001797
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537887.1| PREDICTED: ATP-dependent Clp protease proteo...   378   e-103
ref|NP_563893.1| ATP-dependent Clp protease proteolytic subunit ...   377   e-102
gb|AFK45588.1| unknown [Lotus japonicus]                              375   e-102
ref|XP_002889893.1| hypothetical protein ARALYDRAFT_471314 [Arab...   375   e-102
gb|AAB99906.1| ATP-dependent Clp protease proteolytic subunit [A...   375   e-102

>ref|XP_003537887.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic-like [Glycine max]
          Length = 273

 Score =  378 bits (971), Expect = e-103
 Identities = 192/249 (77%), Positives = 211/249 (84%)
 Frame = +2

Query: 11  FCNRNPKSLIVSALQTPYGDSSRIGLSRKPNGLGLKVDNKESLGVASPSYGVIEAKKGNP 190
           F +RNP S I S+L  PYG SS +GLS K  G  LK+D K   G AS SYG IEAK GNP
Sbjct: 28  FSHRNPCS-IASSLPNPYGHSSGVGLSSKSRGFPLKLDEKNIHG-ASTSYGAIEAK-GNP 84

Query: 191 PVMPAVLTPGGPLDLSTVLFRNRIIFIGQPINAQVAQRVISQLVTLATIDENADILMYLN 370
           P+ PAV+TPGGPLDLS+VLFRNRIIFIGQP+N+QVAQRVISQLVTLATIDENADIL+Y+N
Sbjct: 85  PITPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENADILVYIN 144

Query: 371 CPGGSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYSMPNSRIMIHQP 550
           CPGGSTYSVLAIYDCMSWIKPKVGTVCF              EKGMRY+MPN+RIMIHQP
Sbjct: 145 CPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIMIHQP 204

Query: 551 QSGCGGHVEDVRRQVNEAVQTRYKVDNMFAAFTGQPLEKVQQYTERDRFLSVSEAMEFGL 730
           QSGCGGHVEDVRRQVNEAVQ+R+K+D M++ FTGQPLEKVQQYTERDRFLSVSEA+EFGL
Sbjct: 205 QSGCGGHVEDVRRQVNEAVQSRHKIDKMYSVFTGQPLEKVQQYTERDRFLSVSEALEFGL 264

Query: 731 IDGVLETEY 757
           IDGVLETEY
Sbjct: 265 IDGVLETEY 273


>ref|NP_563893.1| ATP-dependent Clp protease proteolytic subunit 6 [Arabidopsis
           thaliana] gi|75313132|sp|Q9SAA2.1|CLPP6_ARATH RecName:
           Full=ATP-dependent Clp protease proteolytic subunit 6,
           chloroplastic; AltName: Full=Endopeptidase ClpP6;
           Short=nClpP6; AltName: Full=nClpP1; Flags: Precursor
           gi|4835782|gb|AAD30248.1|AC007296_9 Identical to
           gb|AF016621 ATP-dependent Clp protease proteolytic
           subunit from Arabidopsis thaliana and is a member of the
           PF|00574 CLP_protease family. ESTs gb|F13836 and
           gb|F13997 come from this gene [Arabidopsis thaliana]
           gi|13194778|gb|AAK15551.1|AF348580_1 putative
           ATP-dependent Clp protease proteolytic subunit ClpP6
           [Arabidopsis thaliana] gi|21592854|gb|AAM64804.1|
           ATP-dependent Clp protease proteolytic subunit (ClpP6)
           [Arabidopsis thaliana] gi|110737993|dbj|BAF00932.1|
           putative ATP-dependent Clp protease proteolytic subunit
           [Arabidopsis thaliana] gi|332190657|gb|AEE28778.1|
           ATP-dependent Clp protease proteolytic subunit 6
           [Arabidopsis thaliana]
          Length = 271

 Score =  377 bits (968), Expect = e-102
 Identities = 186/246 (75%), Positives = 209/246 (84%)
 Frame = +2

Query: 20  RNPKSLIVSALQTPYGDSSRIGLSRKPNGLGLKVDNKESLGVASPSYGVIEAKKGNPPVM 199
           RNP   IVSALQ+PYGDS + GLS   +G  +K+DNK      +P +GVIEAKKGNPPVM
Sbjct: 32  RNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKIDNK------APRFGVIEAKKGNPPVM 85

Query: 200 PAVLTPGGPLDLSTVLFRNRIIFIGQPINAQVAQRVISQLVTLATIDENADILMYLNCPG 379
           P+V+TPGGPLDLS+VLFRNRIIFIGQPINAQVAQRVISQLVTLA+ID+ +DILMYLNCPG
Sbjct: 86  PSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPG 145

Query: 380 GSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYSMPNSRIMIHQPQSG 559
           GSTYSVLAIYDCMSWIKPKVGTV F              EKGMRY+MPN+R+MIHQPQ+G
Sbjct: 146 GSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTG 205

Query: 560 CGGHVEDVRRQVNEAVQTRYKVDNMFAAFTGQPLEKVQQYTERDRFLSVSEAMEFGLIDG 739
           CGGHVEDVRRQVNEA++ R K+D M+AAFTGQPLEKVQQYTERDRFLS SEA+EFGLIDG
Sbjct: 206 CGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDG 265

Query: 740 VLETEY 757
           +LETEY
Sbjct: 266 LLETEY 271


>gb|AFK45588.1| unknown [Lotus japonicus]
          Length = 275

 Score =  375 bits (963), Expect = e-102
 Identities = 189/241 (78%), Positives = 205/241 (85%), Gaps = 1/241 (0%)
 Frame = +2

Query: 38  IVSALQTPYGD-SSRIGLSRKPNGLGLKVDNKESLGVASPSYGVIEAKKGNPPVMPAVLT 214
           I S L +PYG  SS+ GLS K  G  LK+D K +   AS SYG IEAKKGNPP+ PAV+T
Sbjct: 36  IASNLSSPYGGHSSKFGLSSKSPGFPLKLDEKNTYD-ASTSYGAIEAKKGNPPITPAVMT 94

Query: 215 PGGPLDLSTVLFRNRIIFIGQPINAQVAQRVISQLVTLATIDENADILMYLNCPGGSTYS 394
           PGGPLDLS+VLFRNRIIFIGQP+NAQVAQRVISQLVTLATID NADILMY+NCPGGSTYS
Sbjct: 95  PGGPLDLSSVLFRNRIIFIGQPVNAQVAQRVISQLVTLATIDPNADILMYINCPGGSTYS 154

Query: 395 VLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYSMPNSRIMIHQPQSGCGGHV 574
           VLAIYDCMSWIKPKVGTVCF              EKGMRYSMPNSRIMIHQPQSGCGGHV
Sbjct: 155 VLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYSMPNSRIMIHQPQSGCGGHV 214

Query: 575 EDVRRQVNEAVQTRYKVDNMFAAFTGQPLEKVQQYTERDRFLSVSEAMEFGLIDGVLETE 754
           EDVRRQVNEAVQ+R+K+D M++AFTGQP+EKVQQYTERD FLSVSEA+EFGLIDGVLETE
Sbjct: 215 EDVRRQVNEAVQSRHKIDKMYSAFTGQPIEKVQQYTERDHFLSVSEALEFGLIDGVLETE 274

Query: 755 Y 757
           Y
Sbjct: 275 Y 275


>ref|XP_002889893.1| hypothetical protein ARALYDRAFT_471314 [Arabidopsis lyrata subsp.
           lyrata] gi|297335735|gb|EFH66152.1| hypothetical protein
           ARALYDRAFT_471314 [Arabidopsis lyrata subsp. lyrata]
          Length = 271

 Score =  375 bits (963), Expect = e-102
 Identities = 185/246 (75%), Positives = 208/246 (84%)
 Frame = +2

Query: 20  RNPKSLIVSALQTPYGDSSRIGLSRKPNGLGLKVDNKESLGVASPSYGVIEAKKGNPPVM 199
           RNP   IVSAL +PYGDS + GLS   +G  +K+DNK+      P +GVIEAKKGNPPVM
Sbjct: 32  RNPIRRIVSALPSPYGDSLKAGLSSNVSGSPIKIDNKD------PRFGVIEAKKGNPPVM 85

Query: 200 PAVLTPGGPLDLSTVLFRNRIIFIGQPINAQVAQRVISQLVTLATIDENADILMYLNCPG 379
           P+V+TPGGPLDLS+VLFRNRIIFIGQPINAQVAQRVISQLVTLA+ID+ +DILMYLNCPG
Sbjct: 86  PSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPG 145

Query: 380 GSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYSMPNSRIMIHQPQSG 559
           GSTYSVLAIYDCMSWIKPKVGTV F              EKGMRY+MPN+R+MIHQPQ+G
Sbjct: 146 GSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTG 205

Query: 560 CGGHVEDVRRQVNEAVQTRYKVDNMFAAFTGQPLEKVQQYTERDRFLSVSEAMEFGLIDG 739
           CGGHVEDVRRQVNEA++ R K+D M+AAFTGQPLEKVQQYTERDRFLS SEA+EFGLIDG
Sbjct: 206 CGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDG 265

Query: 740 VLETEY 757
           +LETEY
Sbjct: 266 LLETEY 271


>gb|AAB99906.1| ATP-dependent Clp protease proteolytic subunit [Arabidopsis
           thaliana]
          Length = 271

 Score =  375 bits (962), Expect = e-102
 Identities = 185/246 (75%), Positives = 207/246 (84%)
 Frame = +2

Query: 20  RNPKSLIVSALQTPYGDSSRIGLSRKPNGLGLKVDNKESLGVASPSYGVIEAKKGNPPVM 199
           RNP   IVSALQ+PYGDS + GLS   +G  +K+DNK      +P +GVIEAKKGNPPVM
Sbjct: 32  RNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKIDNK------APRFGVIEAKKGNPPVM 85

Query: 200 PAVLTPGGPLDLSTVLFRNRIIFIGQPINAQVAQRVISQLVTLATIDENADILMYLNCPG 379
           P+V+TPGGPLDLS+VLFRNRIIFIGQPINAQVAQRVISQLVTLA+ID+ +DILMYLNCPG
Sbjct: 86  PSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPG 145

Query: 380 GSTYSVLAIYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYSMPNSRIMIHQPQSG 559
           GSTYSVL IYDCMSWIKPKVGTV F              EKGMRY+MPN+R+MIHQPQ+G
Sbjct: 146 GSTYSVLTIYDCMSWIKPKVGTVAFGVAASQGAFFLAGGEKGMRYAMPNTRVMIHQPQTG 205

Query: 560 CGGHVEDVRRQVNEAVQTRYKVDNMFAAFTGQPLEKVQQYTERDRFLSVSEAMEFGLIDG 739
           CGGHVEDVRRQVNEA++ R K+D M+AAFTGQPLEKVQQYTERDRFLS SEA EFGLIDG
Sbjct: 206 CGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEAFEFGLIDG 265

Query: 740 VLETEY 757
           +LETEY
Sbjct: 266 LLETEY 271