BLASTX nr result

ID: Bupleurum21_contig00001785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001785
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A gi|556667|emb...   232   2e-59
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...   209   2e-52
gb|ACC60969.1| phytochrome A [Vitis riparia]                          206   2e-51
dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]                   203   1e-50
dbj|BAA99408.1| phytochrome A [Armoracia rusticana]                   203   1e-50

>sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A gi|556667|emb|CAA53165.1| phytochrome A
            [Petroselinum crispum]
          Length = 1129

 Score =  232 bits (592), Expect = 2e-59
 Identities = 108/121 (89%), Positives = 116/121 (95%)
 Frame = +3

Query: 3    TREDSVPITLVVNACASRGLHDNVVGVCFVAQDVTSQKYIMDKFTRIQGDYKAIVQNPNP 182
            +REDSVPIT+VVNACA+RGLHDNVVGVCFVAQDVTSQK IMDKFTRIQGDYKAIVQNPNP
Sbjct: 706  SREDSVPITVVVNACATRGLHDNVVGVCFVAQDVTSQKTIMDKFTRIQGDYKAIVQNPNP 765

Query: 183  LIPPIFGADEFGWCSEWNQAMAELSGWCREEVVNKMLLGEIFGVQTSCCRLKSRQAFVNL 362
            LIPPIFG DEFGWCSEWNQAM ELSGW RE+V+NKMLLGEIFG+QTSCC LKS++AFVNL
Sbjct: 766  LIPPIFGTDEFGWCSEWNQAMTELSGWRREDVMNKMLLGEIFGIQTSCCHLKSKEAFVNL 825

Query: 363  G 365
            G
Sbjct: 826  G 826


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score =  209 bits (532), Expect = 2e-52
 Identities = 95/121 (78%), Positives = 109/121 (90%)
 Frame = +3

Query: 3    TREDSVPITLVVNACASRGLHDNVVGVCFVAQDVTSQKYIMDKFTRIQGDYKAIVQNPNP 182
            ++ DS PI+LVVNACASR LH+NVVGVCFVAQD+TSQK +MDKFTRI+GDYKAIVQNPNP
Sbjct: 700  SKRDSGPISLVVNACASRDLHENVVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNP 759

Query: 183  LIPPIFGADEFGWCSEWNQAMAELSGWCREEVVNKMLLGEIFGVQTSCCRLKSRQAFVNL 362
            LIPPIFG DEFGWCSEWN AM +LSGW REEV++KMLLGE+FG   +CCRLK+R+AFV L
Sbjct: 760  LIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGL 819

Query: 363  G 365
            G
Sbjct: 820  G 820


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score =  206 bits (523), Expect = 2e-51
 Identities = 94/121 (77%), Positives = 108/121 (89%)
 Frame = +3

Query: 3    TREDSVPITLVVNACASRGLHDNVVGVCFVAQDVTSQKYIMDKFTRIQGDYKAIVQNPNP 182
            ++ DS PI+LVVNACASR L +NVVGVCFVAQD+TSQK +MDKFTRI+GDYKAIVQNPNP
Sbjct: 700  SKRDSGPISLVVNACASRDLDENVVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNP 759

Query: 183  LIPPIFGADEFGWCSEWNQAMAELSGWCREEVVNKMLLGEIFGVQTSCCRLKSRQAFVNL 362
            LIPPIFG DEFGWCSEWN AM +LSGW REEV++KMLLGE+FG   +CCRLK+R+AFV L
Sbjct: 760  LIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGL 819

Query: 363  G 365
            G
Sbjct: 820  G 820


>dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]
          Length = 1124

 Score =  203 bits (517), Expect = 1e-50
 Identities = 91/120 (75%), Positives = 107/120 (89%)
 Frame = +3

Query: 6    REDSVPITLVVNACASRGLHDNVVGVCFVAQDVTSQKYIMDKFTRIQGDYKAIVQNPNPL 185
            R D  PI+LVVNACASR +H+NVVGVCFVAQD+T QK +MDKFTRI+GDYKAIVQNPNPL
Sbjct: 702  RADFGPISLVVNACASRDIHENVVGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNPNPL 761

Query: 186  IPPIFGADEFGWCSEWNQAMAELSGWCREEVVNKMLLGEIFGVQTSCCRLKSRQAFVNLG 365
            IPPIFG DEFGWCSEWN AM +L+GW REEV++KMLLGE+FG+  +CC LK+++AFVNLG
Sbjct: 762  IPPIFGTDEFGWCSEWNPAMTKLTGWKREEVMDKMLLGEVFGIHMACCPLKNQEAFVNLG 821


>dbj|BAA99408.1| phytochrome A [Armoracia rusticana]
          Length = 1122

 Score =  203 bits (516), Expect = 1e-50
 Identities = 91/121 (75%), Positives = 110/121 (90%)
 Frame = +3

Query: 3    TREDSVPITLVVNACASRGLHDNVVGVCFVAQDVTSQKYIMDKFTRIQGDYKAIVQNPNP 182
            +R D+ PI+LVVNACASR LH+NVVGVCFVA D+T QK +MDKFTRI+GDYKAI+QNPNP
Sbjct: 702  SRADAGPISLVVNACASRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNP 761

Query: 183  LIPPIFGADEFGWCSEWNQAMAELSGWCREEVVNKMLLGEIFGVQTSCCRLKSRQAFVNL 362
            LIPPIFG DEFGWC+EWN AM++L+G  REEV++KMLLGE+FG QT+CCRLK+++AFVNL
Sbjct: 762  LIPPIFGTDEFGWCTEWNPAMSKLTGLKREEVIDKMLLGEVFGTQTACCRLKNQEAFVNL 821

Query: 363  G 365
            G
Sbjct: 822  G 822


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