BLASTX nr result

ID: Bupleurum21_contig00001774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001774
         (1328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mit...   303   5e-80
ref|XP_002509613.1| immature colon carcinoma transcript, putativ...   285   2e-74
ref|XP_002304436.1| predicted protein [Populus trichocarpa] gi|2...   280   6e-73
ref|XP_002329853.1| predicted protein [Populus trichocarpa] gi|2...   278   2e-72
ref|XP_002489061.1| hypothetical protein SORBIDRAFT_0186s002020 ...   265   3e-68

>ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Vitis
            vinifera] gi|296082846|emb|CBI22147.3| unnamed protein
            product [Vitis vinifera]
          Length = 230

 Score =  303 bits (777), Expect = 5e-80
 Identities = 167/225 (74%), Positives = 189/225 (84%), Gaps = 3/225 (1%)
 Frame = -2

Query: 1252 MAAIRATSSMIMRDIFS-SPSLSFPMFRTMMFPSFGVALCRVPRVMTITYSPVVRSAAGD 1076
            MA IR T++MI+++IF  S SL       M+ P+F V    V R   I+YS + R AA D
Sbjct: 1    MATIRCTTNMIVKEIFHVSLSLRSERMFQMVLPNFSVYCGTVNR--GISYSRI-RCAAAD 57

Query: 1075 --DGRKKPSARLSQVQQIVHEAQERSQSAGNEPIPQITIDHVSVSFARSGGPGGQNVNKV 902
              DG +K SARLSQVQQ++ EA+ERS S GNEP P+IT+DHV+VSFARSGGPGGQNVNKV
Sbjct: 58   SGDGGRKVSARLSQVQQLLQEAEERSLSFGNEPTPKITLDHVTVSFARSGGPGGQNVNKV 117

Query: 901  NTKVDMRFNVKDAHWLSDRVKERIMQVEKNRINKDGEIVISSTKTRTQKGNIEDALGKLQ 722
            NTKVDMRFNVK+A+WLSDRV+ERIMQ+EKNRINKDGEIVISSTKTRTQKGNIEDALGKLQ
Sbjct: 118  NTKVDMRFNVKNAYWLSDRVRERIMQMEKNRINKDGEIVISSTKTRTQKGNIEDALGKLQ 177

Query: 721  AIIDAASYVPPPPSEEQMKKIAKIAAIGEHKRLQSKKVLSQKKAF 587
            AIIDAASYVPPPPSEEQ KKIAK+AAIGE KRLQ+KKVLSQKKAF
Sbjct: 178  AIIDAASYVPPPPSEEQKKKIAKLAAIGEQKRLQNKKVLSQKKAF 222


>ref|XP_002509613.1| immature colon carcinoma transcript, putative [Ricinus communis]
            gi|223549512|gb|EEF51000.1| immature colon carcinoma
            transcript, putative [Ricinus communis]
          Length = 234

 Score =  285 bits (728), Expect = 2e-74
 Identities = 155/228 (67%), Positives = 182/228 (79%), Gaps = 6/228 (2%)
 Frame = -2

Query: 1252 MAAIRATSSMIMRDI-FSSPSLSFPMFRTMMFPSFGVALCRV-PRVMTITYSPV----VR 1091
            MAA R  ++MI+++I +    LSF    +   PS  +    +    +  T   +    +R
Sbjct: 1    MAATRTATTMILKEIVYCRLRLSFSSLSSSSLPSLRLTPTNLHANAVKFTRRELSFSRIR 60

Query: 1090 SAAGDDGRKKPSARLSQVQQIVHEAQERSQSAGNEPIPQITIDHVSVSFARSGGPGGQNV 911
             AA DD  KK SARLSQVQQ++ EA+E++ SAGNEP P+IT+DHV+VSFARSGGPGGQNV
Sbjct: 61   CAASDD--KKVSARLSQVQQLLQEAEEQAISAGNEPPPKITLDHVTVSFARSGGPGGQNV 118

Query: 910  NKVNTKVDMRFNVKDAHWLSDRVKERIMQVEKNRINKDGEIVISSTKTRTQKGNIEDALG 731
            NKVNTKVDMRFNVKDA+WLSDR+++RIMQ+EKNRINKDGEIVISSTKTRTQKGNIEDAL 
Sbjct: 119  NKVNTKVDMRFNVKDAYWLSDRIRDRIMQMEKNRINKDGEIVISSTKTRTQKGNIEDALA 178

Query: 730  KLQAIIDAASYVPPPPSEEQMKKIAKIAAIGEHKRLQSKKVLSQKKAF 587
            KLQAIIDAASYVPPPPSEEQ KKIAK+AAIGE KRL+SKKVLS KKAF
Sbjct: 179  KLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQKRLKSKKVLSDKKAF 226


>ref|XP_002304436.1| predicted protein [Populus trichocarpa] gi|222841868|gb|EEE79415.1|
            predicted protein [Populus trichocarpa]
          Length = 229

 Score =  280 bits (716), Expect = 6e-73
 Identities = 152/227 (66%), Positives = 184/227 (81%), Gaps = 5/227 (2%)
 Frame = -2

Query: 1252 MAAIRATSSMIMRDIFSS-----PSLSFPMFRTMMFPSFGVALCRVPRVMTITYSPVVRS 1088
            MA IR +++MI++ +F       P  SF + RT+   +   A  +VP    I++S + + 
Sbjct: 1    MAVIRTSTNMILKQVFLDNLLIPPVPSFSVSRTL--GNLRWANLKVPN-REISFSRI-KC 56

Query: 1087 AAGDDGRKKPSARLSQVQQIVHEAQERSQSAGNEPIPQITIDHVSVSFARSGGPGGQNVN 908
            A  DD  KK S+RLSQVQQ++ EA+ER+ +AGNEP P+IT+DHV+VSFARSGGPGGQNVN
Sbjct: 57   AGSDD--KKVSSRLSQVQQLLQEAEERASAAGNEPPPKITLDHVTVSFARSGGPGGQNVN 114

Query: 907  KVNTKVDMRFNVKDAHWLSDRVKERIMQVEKNRINKDGEIVISSTKTRTQKGNIEDALGK 728
            KVNTKVDMRFNVK+A+WLS+R++ERIMQ+EKNRINKDGEIVISSTKTRTQKGNI+DAL K
Sbjct: 115  KVNTKVDMRFNVKNAYWLSERIRERIMQMEKNRINKDGEIVISSTKTRTQKGNIDDALAK 174

Query: 727  LQAIIDAASYVPPPPSEEQMKKIAKIAAIGEHKRLQSKKVLSQKKAF 587
            LQAIID ASYVPPPPSEEQ KKIAK+AAIGE KRL+SKK LS KKAF
Sbjct: 175  LQAIIDVASYVPPPPSEEQKKKIAKLAAIGEQKRLKSKKALSDKKAF 221


>ref|XP_002329853.1| predicted protein [Populus trichocarpa] gi|222871090|gb|EEF08221.1|
            predicted protein [Populus trichocarpa]
          Length = 226

 Score =  278 bits (711), Expect = 2e-72
 Identities = 148/222 (66%), Positives = 175/222 (78%)
 Frame = -2

Query: 1252 MAAIRATSSMIMRDIFSSPSLSFPMFRTMMFPSFGVALCRVPRVMTITYSPVVRSAAGDD 1073
            MA IR T++MI++ +F +  L  P+  T    +   A   VP     +    ++ AA DD
Sbjct: 1    MAVIRTTTNMILKQVFLNHRLIPPLSVTRTLSNLHWASLEVPNRQISSCR--IKCAASDD 58

Query: 1072 GRKKPSARLSQVQQIVHEAQERSQSAGNEPIPQITIDHVSVSFARSGGPGGQNVNKVNTK 893
              KK SARLSQV Q++ EA+ER+ + GNEP P+IT  HV+VSFARSGGPGGQNVNKVNTK
Sbjct: 59   --KKVSARLSQVHQLLQEAEERASAVGNEPTPKITRGHVTVSFARSGGPGGQNVNKVNTK 116

Query: 892  VDMRFNVKDAHWLSDRVKERIMQVEKNRINKDGEIVISSTKTRTQKGNIEDALGKLQAII 713
            VDMRFNVK A+WLSDR++ERIMQ+EKNRINKDGEIVISSTKTRTQ GNI+DAL KLQA+I
Sbjct: 117  VDMRFNVKKAYWLSDRIRERIMQMEKNRINKDGEIVISSTKTRTQTGNIDDALEKLQAVI 176

Query: 712  DAASYVPPPPSEEQMKKIAKIAAIGEHKRLQSKKVLSQKKAF 587
            DAASYVPPPPSEEQ KKIAK+A+IGE KRL+SKKVLS KKAF
Sbjct: 177  DAASYVPPPPSEEQKKKIAKLASIGEQKRLRSKKVLSDKKAF 218


>ref|XP_002489061.1| hypothetical protein SORBIDRAFT_0186s002020 [Sorghum bicolor]
            gi|241947214|gb|EES20359.1| hypothetical protein
            SORBIDRAFT_0186s002020 [Sorghum bicolor]
          Length = 227

 Score =  265 bits (676), Expect = 3e-68
 Identities = 128/168 (76%), Positives = 151/168 (89%)
 Frame = -2

Query: 1090 SAAGDDGRKKPSARLSQVQQIVHEAQERSQSAGNEPIPQITIDHVSVSFARSGGPGGQNV 911
            + AGDDG KK SARL+  QQ++ +A+ER+ SAG++P P+IT+DHV+V+FARSGGPGGQNV
Sbjct: 52   AGAGDDGGKKVSARLALTQQVLRDAEERAASAGSDPAPKITLDHVTVNFARSGGPGGQNV 111

Query: 910  NKVNTKVDMRFNVKDAHWLSDRVKERIMQVEKNRINKDGEIVISSTKTRTQKGNIEDALG 731
            NKVNTKVDMRFNVK+AHWL +R+KERI+Q EKNRINKDGE+VISSTKTRTQKGNIEDAL 
Sbjct: 112  NKVNTKVDMRFNVKEAHWLGERIKERILQAEKNRINKDGELVISSTKTRTQKGNIEDALQ 171

Query: 730  KLQAIIDAASYVPPPPSEEQMKKIAKIAAIGEHKRLQSKKVLSQKKAF 587
            K+QAIIDAASYVPPPP+E+Q KKI KIAA  E KRLQ+KKV+SQKK F
Sbjct: 172  KIQAIIDAASYVPPPPTEDQKKKIEKIAAAAERKRLQNKKVVSQKKEF 219


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