BLASTX nr result

ID: Bupleurum21_contig00001767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001767
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568902.2| ubiquitin carrier protein 7 [Arabidopsis thalia...    92   6e-17
gb|AAL86003.1| putative E2, ubiquitin-conjugating enzyme UBC7 [A...    92   6e-17
sp|Q42540.1|UBC7_ARATH RecName: Full=Ubiquitin-conjugating enzym...    92   6e-17
ref|NP_566884.1| ubiquitin-conjugating enzyme E2 13 [Arabidopsis...    91   2e-16
ref|XP_002284116.1| PREDICTED: ubiquitin-conjugating enzyme E2 7...    90   3e-16

>ref|NP_568902.2| ubiquitin carrier protein 7 [Arabidopsis thaliana]
           gi|28973769|gb|AAO64200.1| putative E2,
           ubiquitin-conjugating enzyme UBC7 [Arabidopsis thaliana]
           gi|332009785|gb|AED97168.1| ubiquitin carrier protein 7
           [Arabidopsis thaliana]
          Length = 203

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 42/59 (71%), Positives = 46/59 (77%)
 Frame = -1

Query: 562 ERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRDKKDVFKKKVSRCVRRSQEMF 386
           ERWTPVHTVE            PNDESPAN++AAKEWRDK+D FKKKVSRCVR+SQEMF
Sbjct: 145 ERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEMF 203


>gb|AAL86003.1| putative E2, ubiquitin-conjugating enzyme UBC7 [Arabidopsis
           thaliana]
          Length = 187

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 42/59 (71%), Positives = 46/59 (77%)
 Frame = -1

Query: 562 ERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRDKKDVFKKKVSRCVRRSQEMF 386
           ERWTPVHTVE            PNDESPAN++AAKEWRDK+D FKKKVSRCVR+SQEMF
Sbjct: 129 ERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEMF 187


>sp|Q42540.1|UBC7_ARATH RecName: Full=Ubiquitin-conjugating enzyme E2 7; AltName:
           Full=Ubiquitin carrier protein 7; AltName:
           Full=Ubiquitin-protein ligase 7 gi|992704|gb|AAC49321.1|
           UBC7 [Arabidopsis thaliana] gi|9759251|dbj|BAB09775.1|
           ubiquitin-conjugating enzyme UBC7 [Arabidopsis thaliana]
          Length = 166

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 42/59 (71%), Positives = 46/59 (77%)
 Frame = -1

Query: 562 ERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRDKKDVFKKKVSRCVRRSQEMF 386
           ERWTPVHTVE            PNDESPAN++AAKEWRDK+D FKKKVSRCVR+SQEMF
Sbjct: 108 ERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEMF 166


>ref|NP_566884.1| ubiquitin-conjugating enzyme E2 13 [Arabidopsis thaliana]
           gi|297819204|ref|XP_002877485.1| ubiquitin-conjugating
           enzyme 13 [Arabidopsis lyrata subsp. lyrata]
           gi|31077015|sp|Q42541.1|UBC13_ARATH RecName:
           Full=Ubiquitin-conjugating enzyme E2 13; AltName:
           Full=Ubiquitin carrier protein 13; AltName:
           Full=Ubiquitin-protein ligase 13
           gi|992706|gb|AAC49322.1| UBC13 [Arabidopsis thaliana]
           gi|6522625|emb|CAB62037.1| ubiquitin conjugating enzyme
           E2 (UBC13) [Arabidopsis thaliana]
           gi|15215680|gb|AAK91385.1| AT3g46460/F18L15_180
           [Arabidopsis thaliana] gi|20334880|gb|AAM16196.1|
           AT3g46460/F18L15_180 [Arabidopsis thaliana]
           gi|66354436|gb|AAY44853.1| ubiquitinating enzyme
           [Arabidopsis thaliana] gi|297323323|gb|EFH53744.1|
           ubiquitin-conjugating enzyme 13 [Arabidopsis lyrata
           subsp. lyrata] gi|332644641|gb|AEE78162.1|
           ubiquitin-conjugating enzyme E2 13 [Arabidopsis
           thaliana]
          Length = 166

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 41/59 (69%), Positives = 46/59 (77%)
 Frame = -1

Query: 562 ERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRDKKDVFKKKVSRCVRRSQEMF 386
           ERWTPVHTVE            PNDESPAN++AAKEWR+K+D FKKKVSRCVR+SQEMF
Sbjct: 108 ERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRKSQEMF 166


>ref|XP_002284116.1| PREDICTED: ubiquitin-conjugating enzyme E2 7 isoform 1 [Vitis
           vinifera]
          Length = 170

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 42/59 (71%), Positives = 46/59 (77%)
 Frame = -1

Query: 562 ERWTPVHTVEXXXXXXXXXXXSPNDESPANIDAAKEWRDKKDVFKKKVSRCVRRSQEMF 386
           ERW P+HTVE           SPNDESPANI+AAKEWRD++D FKKKVSRCVRRSQEMF
Sbjct: 112 ERWMPIHTVESIVLSIISMLSSPNDESPANIEAAKEWRDRRDEFKKKVSRCVRRSQEMF 170


Top