BLASTX nr result

ID: Bupleurum21_contig00001752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001752
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBJ55937.1| pathogenesis related gene 5 [Bupleurum kaoi]          148   4e-34
gb|AAL47574.1| thaumatin-like protein [Daucus carota]                 119   2e-25
ref|XP_002265852.1| PREDICTED: thaumatin-like protein 1 [Vitis v...    85   5e-15
gb|ACX32461.1| thaumatin-like protein [Pyrus x bretschneideri]         80   2e-13
ref|XP_004137850.1| PREDICTED: thaumatin-like protein 1-like [Cu...    78   7e-13

>emb|CBJ55937.1| pathogenesis related gene 5 [Bupleurum kaoi]
          Length = 234

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/83 (86%), Positives = 72/83 (86%)
 Frame = -1

Query: 302 MGMQSXXXXXXXXXXLVGGESARFTITNNCDKTIWPAALSGGGSQPSTTGFELASKATNF 123
           MGMQS          LVGGESARFTITNNCDKTIWPAALSGGGSQPSTTGFELASKATN 
Sbjct: 1   MGMQSLVALAFAALLLVGGESARFTITNNCDKTIWPAALSGGGSQPSTTGFELASKATNS 60

Query: 122 IDIPAPWTGRIWARTFCGATCLT 54
           IDIPAPWTGRIWARTFCGATCLT
Sbjct: 61  IDIPAPWTGRIWARTFCGATCLT 83


>gb|AAL47574.1| thaumatin-like protein [Daucus carota]
          Length = 214

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/66 (81%), Positives = 59/66 (89%)
 Frame = -1

Query: 251 GGESARFTITNNCDKTIWPAALSGGGSQPSTTGFELASKATNFIDIPAPWTGRIWARTFC 72
           GGE+A+FTI +NC  TIWPAAL+G GSQPSTTGFELASKAT  IDIPAPW+GRIWARTFC
Sbjct: 13  GGEAAKFTIVDNCPNTIWPAALTGTGSQPSTTGFELASKATKPIDIPAPWSGRIWARTFC 72

Query: 71  GATCLT 54
            ATCLT
Sbjct: 73  AATCLT 78


>ref|XP_002265852.1| PREDICTED: thaumatin-like protein 1 [Vitis vinifera]
           gi|297739994|emb|CBI30176.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 36/57 (63%), Positives = 44/57 (77%)
 Frame = -1

Query: 242 SARFTITNNCDKTIWPAALSGGGSQPSTTGFELASKATNFIDIPAPWTGRIWARTFC 72
           SA FT  N C  T+WPA L+G GSQ S+TGFELAS A++ +D+PAPW+GR WART C
Sbjct: 21  SATFTFKNQCPYTVWPATLTGAGSQLSSTGFELASGASSSLDVPAPWSGRFWARTLC 77


>gb|ACX32461.1| thaumatin-like protein [Pyrus x bretschneideri]
          Length = 248

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = -1

Query: 251 GGESARFTITNNCDKTIWPAALSGGGS-QPSTTGFELASKATNFIDIPAPWTGRIWARTF 75
           G  +A+ T TNNC  T+WPA L+GG   Q  +TGFELASKA+  +D P+PW+GR WART 
Sbjct: 20  GAHAAKITFTNNCPDTVWPATLTGGQKPQLPSTGFELASKASQSVDAPSPWSGRFWARTR 79

Query: 74  C 72
           C
Sbjct: 80  C 80


>ref|XP_004137850.1| PREDICTED: thaumatin-like protein 1-like [Cucumis sativus]
           gi|449501022|ref|XP_004161257.1| PREDICTED:
           thaumatin-like protein 1-like [Cucumis sativus]
          Length = 241

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 6/72 (8%)
 Frame = -1

Query: 251 GGESARFTITNNCDKTIWPAALSGGGSQP--STTGFELASKATNFIDIPAPWTGRIWART 78
           G E+A+ T+ NNC  +IWPA L+ G  QP  STTGF+LA   +   ++PAPWTGR+WART
Sbjct: 19  GVEAAKMTVKNNCGISIWPATLTSGPGQPQLSTTGFKLAPGESKSFNVPAPWTGRVWART 78

Query: 77  FCG----ATCLT 54
            C      TC+T
Sbjct: 79  RCSNNGRFTCMT 90


Top