BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001746
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containi...   160   2e-71
emb|CBI15366.3| unnamed protein product [Vitis vinifera]              160   2e-71
ref|XP_002512026.1| pentatricopeptide repeat-containing protein,...   155   2e-66
ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago t...   148   8e-64
ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-62

>ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  160 bits (405), Expect(2) = 2e-71
 Identities = 71/116 (61%), Positives = 92/116 (79%)
 Frame = +2

Query: 326 KKRDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGI 505
           +++DV SW  +I GYGIHGRG+EAL LF++M  LGLKPD FT+ GILMAC H GL+E+G+
Sbjct: 571 REKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGL 630

Query: 506 KCLNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
           +  N+M  LH ++P+LEH+ CV+DMLGRAGR  DA+ LIE MP  PD+ IW+SLLS
Sbjct: 631 EYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLS 686



 Score =  135 bits (339), Expect(2) = 2e-71
 Identities = 67/111 (60%), Positives = 86/111 (77%)
 Frame = +3

Query: 3   KVLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNRIQPDETVITSVLVACSQL 182
           +VLF+G+E R+LVSWNVMI+GYS++  P+EAINLF  ++ + IQP E  I  V  ACSQL
Sbjct: 463 QVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQL 522

Query: 183 SDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKRE 335
           S LRLGKE+HCFALKA L +D++V SS+IDMYA  G I  SQR+FD L+ +
Sbjct: 523 SALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK 573



 Score = 80.9 bits (198), Expect(2) = 2e-21
 Identities = 37/114 (32%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3   KVLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLF-HILMYNRIQPDETVITSVLVACSQ 179
           +++F+ +  +NL  WN ++S Y+++E   +A+++F  ++     +PD   +  V+ AC+ 
Sbjct: 54  RMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAG 113

Query: 180 LSDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKREML 341
           L DL LG+ IH  A K  L+ D++VG+++I MY   G +E++ +VF+H+    L
Sbjct: 114 LLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNL 167



 Score = 47.8 bits (112), Expect(2) = 2e-21
 Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
 Frame = +2

Query: 329 KRDVVSWTCLITGYGIHGRGEEALNLFQEMQLLG---LKPDAFTYIGILMACDHMGLIEE 499
           +R++VSW  +I G+  +G  +E+ N F+EM L+G     PD  T + +L  C     IE+
Sbjct: 164 ERNLVSWNSIICGFSENGFLQESFNAFREM-LVGEESFVPDVATLVTVLPVCAGEEDIEK 222

Query: 500 GIKCLNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLL 670
           G+  ++ + +  GL  +L     +IDM  +  RF    +L+     K +   WNS++
Sbjct: 223 GM-AVHGLAVKLGLNEELMVNNSLIDMYSKC-RFLSEAQLLFDKNDKKNIVSWNSMI 277



 Score = 74.3 bits (181), Expect(2) = 3e-20
 Identities = 35/111 (31%), Positives = 68/111 (61%)
 Frame = +3

Query: 9   LFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNRIQPDETVITSVLVACSQLSD 188
           +F+ ++ + + SWN ++ GY+++  P +A++L+  +  + + PD   I S+L+ACS++  
Sbjct: 364 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 423

Query: 189 LRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKREML 341
           L  G+EIH FAL+  L  D ++G S++ +Y   G    +Q +FD ++   L
Sbjct: 424 LHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSL 474



 Score = 50.1 bits (118), Expect(2) = 3e-20
 Identities = 31/114 (27%), Positives = 57/114 (50%)
 Frame = +2

Query: 332 RDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGIKC 511
           R +VSW  +I GY  +G  +EA+NLF++M   G++P     + +  AC  +  +  G K 
Sbjct: 472 RSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLG-KE 530

Query: 512 LNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
           L+   +   L   +   + +IDM  + G    +  + + +  K D A WN +++
Sbjct: 531 LHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK-DVASWNVIIA 583



 Score = 69.3 bits (168), Expect(2) = 5e-15
 Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
 Frame = +3

Query: 9   LFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNR--IQPDETVITSVLVACSQL 182
           +FE + +RNLVSWN +I G+S++    E+ N F  ++       PD   + +VL  C+  
Sbjct: 158 VFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGE 217

Query: 183 SDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFD 320
            D+  G  +H  A+K  L ++L V +S+IDMY+    + ++Q +FD
Sbjct: 218 EDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFD 263



 Score = 37.4 bits (85), Expect(2) = 5e-15
 Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
 Frame = +2

Query: 329 KRDVVSWTCLITGYGIHGRGEEALNLFQEMQL--LGLKPDAFTYIGILMACDHMGLIEEG 502
           K+++VSW  +I GY           L Q+MQ     +K D FT + +L  C     + + 
Sbjct: 267 KKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSEL-QS 325

Query: 503 IKCLNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLL 670
           +K L+     HGL+         I    R G    +  + + M  K   + WN+LL
Sbjct: 326 LKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTK-TVSSWNALL 380



 Score = 60.8 bits (146), Expect(2) = 5e-14
 Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
 Frame = +3

Query: 3   KVLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYN--RIQPDETVITSVLVACS 176
           ++LF+  + +N+VSWN MI GY++ E       L   +     +++ DE  I +VL  C 
Sbjct: 259 QLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCL 318

Query: 177 QLSDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFD 320
           + S+L+  KE+H ++ +  L  +  V ++ I  Y   G++  S+RVFD
Sbjct: 319 ERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFD 366



 Score = 42.4 bits (98), Expect(2) = 5e-14
 Identities = 21/57 (36%), Positives = 31/57 (54%)
 Frame = +2

Query: 332 RDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEG 502
           + V SW  L+ GY  +    +AL+L+ +M   GL PD FT   +L+AC  M  +  G
Sbjct: 371 KTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 427


>emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  160 bits (405), Expect(2) = 2e-71
 Identities = 71/116 (61%), Positives = 92/116 (79%)
 Frame = +2

Query: 326 KKRDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGI 505
           +++DV SW  +I GYGIHGRG+EAL LF++M  LGLKPD FT+ GILMAC H GL+E+G+
Sbjct: 473 REKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGL 532

Query: 506 KCLNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
           +  N+M  LH ++P+LEH+ CV+DMLGRAGR  DA+ LIE MP  PD+ IW+SLLS
Sbjct: 533 EYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLS 588



 Score =  135 bits (339), Expect(2) = 2e-71
 Identities = 67/111 (60%), Positives = 86/111 (77%)
 Frame = +3

Query: 3   KVLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNRIQPDETVITSVLVACSQL 182
           +VLF+G+E R+LVSWNVMI+GYS++  P+EAINLF  ++ + IQP E  I  V  ACSQL
Sbjct: 365 QVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQL 424

Query: 183 SDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKRE 335
           S LRLGKE+HCFALKA L +D++V SS+IDMYA  G I  SQR+FD L+ +
Sbjct: 425 SALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK 475



 Score = 75.1 bits (183), Expect(2) = 2e-20
 Identities = 36/113 (31%), Positives = 69/113 (61%)
 Frame = +3

Query: 3   KVLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNRIQPDETVITSVLVACSQL 182
           K +F+ ++ + + SWN ++ GY+++  P +A++L+  +  + + PD   I S+L+ACS++
Sbjct: 264 KRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 323

Query: 183 SDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKREML 341
             L  G+EIH FAL+  L  D ++G S++ +Y   G    +Q +FD ++   L
Sbjct: 324 KSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSL 376



 Score = 50.1 bits (118), Expect(2) = 2e-20
 Identities = 31/114 (27%), Positives = 57/114 (50%)
 Frame = +2

Query: 332 RDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGIKC 511
           R +VSW  +I GY  +G  +EA+NLF++M   G++P     + +  AC  +  +  G K 
Sbjct: 374 RSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLG-KE 432

Query: 512 LNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
           L+   +   L   +   + +IDM  + G    +  + + +  K D A WN +++
Sbjct: 433 LHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK-DVASWNVIIA 485



 Score = 75.9 bits (185), Expect(2) = 2e-18
 Identities = 37/108 (34%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
 Frame = +3

Query: 3   KVLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLF-HILMYNRIQPDETVITSVLVACSQ 179
           +++F+ +  +NL  WN ++S Y+++E   +A+++F  ++     +PD   +  V+ AC+ 
Sbjct: 161 RMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAG 220

Query: 180 LSDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQS-QRVFD 320
           L DL LG+ IH  A K  L+ D++VG+++I MY   G +E++ +RVFD
Sbjct: 221 LLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFD 268



 Score = 42.4 bits (98), Expect(2) = 2e-18
 Identities = 21/57 (36%), Positives = 31/57 (54%)
 Frame = +2

Query: 332 RDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEG 502
           + V SW  L+ GY  +    +AL+L+ +M   GL PD FT   +L+AC  M  +  G
Sbjct: 273 KTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 329


>ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549206|gb|EEF50695.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 810

 Score =  155 bits (391), Expect(2) = 2e-66
 Identities = 65/116 (56%), Positives = 88/116 (75%)
 Frame = +2

Query: 326 KKRDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGI 505
           K +D+ SW  +I  YG+HG GEE++ LF+ M+ +G  PD FT+IGIL  C H GL+EEG+
Sbjct: 500 KNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGL 559

Query: 506 KCLNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
           K  NEMQ  HG++P+LEH+ACV+DMLGRAGR  DA+ L+  MP +PD+ +W+SLLS
Sbjct: 560 KYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLS 615



 Score =  123 bits (309), Expect(2) = 2e-66
 Identities = 60/113 (53%), Positives = 84/113 (74%)
 Frame = +3

Query: 3   KVLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNRIQPDETVITSVLVACSQL 182
           ++LF+G+E+++ VSWN MISGYS++  P +A+ LF  L+ +  QP +  + SVL ACSQ 
Sbjct: 392 RLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQ 451

Query: 183 SDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKREML 341
           S LRLGKE HC+ALKA L++D++V  S IDMYA SG I++S+ VFD LK + L
Sbjct: 452 SALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDL 504



 Score = 77.8 bits (190), Expect(2) = 2e-21
 Identities = 36/109 (33%), Positives = 66/109 (60%)
 Frame = +3

Query: 9   LFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNRIQPDETVITSVLVACSQLSD 188
           +F  +E + + SWN +I G +++  P +A+NL+  + Y+ + PD   I S+L+A + L  
Sbjct: 293 VFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKS 352

Query: 189 LRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKRE 335
           LR GKE+H F L+  L  D ++G S++ +Y H G    ++ +FD ++ +
Sbjct: 353 LRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEK 401



 Score = 50.4 bits (119), Expect(2) = 2e-21
 Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
 Frame = +2

Query: 326 KKRDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGI 505
           +++  VSW  +I+GY  +G  E+AL LF+++   G +P     + +L AC     +  G 
Sbjct: 399 EEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGK 458

Query: 506 KCLNEMQILHGLKPQLEHFAC-VIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
           +       L  L  +    AC  IDM  ++G   ++  + + +  K D A WN++++
Sbjct: 459 E--THCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNK-DLASWNAIIA 512



 Score = 60.1 bits (144), Expect(2) = 6e-16
 Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   KVLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHIL-MYNRIQPDETVITSVLVACSQ 179
           ++LF+    +N VSWN MI G        EA NLF  + M   I+ +E  + ++L AC +
Sbjct: 189 QMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLE 248

Query: 180 LSDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVF 317
           +S LR  KE+H ++++     D  V +  +  YA  G +  ++RVF
Sbjct: 249 ISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVF 294



 Score = 49.7 bits (117), Expect(2) = 6e-16
 Identities = 35/114 (30%), Positives = 56/114 (49%)
 Frame = +2

Query: 332 RDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGIKC 511
           + V SW  LI G   +G   +ALNL+ +M   GL PD FT   +L+A  H+  +  G K 
Sbjct: 300 KTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYG-KE 358

Query: 512 LNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
           ++   + HGL+        ++ +    G  S A  L + M  K   + WN+++S
Sbjct: 359 VHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVS-WNAMIS 411



 Score = 68.9 bits (167), Expect(2) = 8e-15
 Identities = 36/111 (32%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
 Frame = +3

Query: 9   LFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNR--IQPDETVITSVLVACSQL 182
           +F  +  RNLVSWN +ISG+S++    +  ++   +M     + PD   + +VL  C++ 
Sbjct: 88  VFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCARE 147

Query: 183 SDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKRE 335
            D+++G  IH  A+K  L +D+ V +S++DMY+  G + ++Q +FD   R+
Sbjct: 148 VDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRK 198



 Score = 37.0 bits (84), Expect(2) = 8e-15
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = +2

Query: 329 KRDVVSWTCLITGYGIHGRGEEALNLFQEMQLL-GLKPDAFTYIGILMACDHMGLIEEGI 505
           +++ VSW  +I G    G   EA NLF+EMQ+   ++ +  T + IL AC  +  +   +
Sbjct: 197 RKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQL-RSL 255

Query: 506 KCLNEMQILHGLK 544
           K L+   I HG +
Sbjct: 256 KELHGYSIRHGFQ 268



 Score = 46.6 bits (109), Expect(2) = 2e-10
 Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
 Frame = +2

Query: 332 RDVVSWTCLITGYGIHGRGEEALNLFQEMQL--LGLKPDAFTYIGILMACDHMGLIEEGI 505
           R++VSW  +I+G+  +G  ++  ++  EM     GL PD  T + +L  C     ++ GI
Sbjct: 95  RNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGI 154

Query: 506 KCLNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLL 670
           + ++ + +  GL   +     ++DM  + G  ++A  L +    K +A  WN+++
Sbjct: 155 R-IHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRK-NAVSWNTMI 207



 Score = 44.7 bits (104), Expect(2) = 2e-10
 Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +3

Query: 72  KSEQPNEAINLF-HILMYNRIQPDETVITSVLVACSQLSDLRLGKEIHCFALKACLIDDL 248
           ++E  ++AI++F  ++       D      V+ AC+   D  LG+ IH   +K  L+ D+
Sbjct: 7   RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66

Query: 249 YVGSSVIDMYAHSGSIEQSQRVFDHL 326
           +VG+++I MY   G ++ + +VF ++
Sbjct: 67  FVGNALIAMYGKFGFVDAAVKVFHYM 92


>ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
            gi|355484722|gb|AES65925.1| Pentatricopeptide repeat
            protein [Medicago truncatula]
          Length = 975

 Score =  148 bits (373), Expect(2) = 8e-64
 Identities = 64/111 (57%), Positives = 88/111 (79%)
 Frame = +2

Query: 341  VSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGIKCLNE 520
            V+W  LITGYGIHG G +A+ LF+ MQ  G +PD+ T+I +L AC+H GL+ EG++ L +
Sbjct: 670  VTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQ 729

Query: 521  MQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
            MQ L G+KP+LEH+ACV+DMLGRAGR ++A+EL+  +P KPD+ IW+SLLS
Sbjct: 730  MQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLS 780



 Score =  122 bits (305), Expect(2) = 8e-64
 Identities = 58/117 (49%), Positives = 87/117 (74%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   KVLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNRIQPDETVITSVLVACSQL 182
           K+ F+ +E++NLV WN MI+G+S++E P +A+++FH ++ ++I PDE  I   L ACSQ+
Sbjct: 557 KLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQV 616

Query: 183 SDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFD--HLKREMLYH 347
           S LRLGKE+HCFA+K+ L +  +V  S+IDMYA  G +EQSQ +FD  HLK E+ ++
Sbjct: 617 SALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWN 673



 Score = 68.2 bits (165), Expect(2) = 1e-15
 Identities = 34/111 (30%), Positives = 66/111 (59%)
 Frame = +3

Query: 9   LFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNRIQPDETVITSVLVACSQLSD 188
           +F G+E + + SWN +I G+ ++  P +A++L+ ++  + ++PD   I S+L AC++L  
Sbjct: 458 VFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKS 517

Query: 189 LRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKREML 341
           L  GKEIH   L+     D ++  S++ +Y   G I  ++  FD+++ + L
Sbjct: 518 LSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNL 568



 Score = 40.8 bits (94), Expect(2) = 1e-15
 Identities = 27/116 (23%), Positives = 55/116 (47%)
 Frame = +2

Query: 326 KKRDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGI 505
           +++++V W  +I G+  +    +AL++F +M    + PD  + IG L AC  +  +  G 
Sbjct: 564 EEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLG- 622

Query: 506 KCLNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
           K L+   +   L         +IDM  + G    +  + + + +K +   WN L++
Sbjct: 623 KELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVT-WNVLIT 677



 Score = 57.4 bits (137), Expect(2) = 1e-13
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
 Frame = +3

Query: 3   KVLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFH-ILMYNRIQPDETVITSVLVACSQ 179
           +VLF+   ++N++SWN MI GYSK      A  L   + M ++++ +E  + +VL  C +
Sbjct: 354 RVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEE 412

Query: 180 LSDLRLGKEIHCFALKACLI-DDLYVGSSVIDMYAHSGSIEQSQRVFDHLKREML 341
                  KEIH +AL+   I  D  V ++ +  YA  GS+  ++ VF  ++ +M+
Sbjct: 413 EIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMV 467



 Score = 44.3 bits (103), Expect(2) = 1e-13
 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
 Frame = +2

Query: 338 VVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGIKCLN 517
           V SW  LI G+  +G   +AL+L+  M+  GL+PD FT   +L AC  +  +  G K ++
Sbjct: 467 VSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCG-KEIH 525

Query: 518 EMQILHGLKPQLEHFACV--IDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
              + +G   +L+ F C+  + +  + G+   A    + M  K +   WN++++
Sbjct: 526 GSMLRNGF--ELDEFICISLVSLYVQCGKILLAKLFFDNMEEK-NLVCWNTMIN 576



 Score = 75.5 bits (184), Expect = 9e-12
 Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
 Frame = +3

Query: 6   VLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLF-HILMYNRIQPDETVITSVLVACSQL 182
           ++F     +NL  WN ++SGY ++    +A+ +F  ++      PD   +  V+ AC  +
Sbjct: 150 LVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGV 209

Query: 183 SDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKREML 341
            D+RLG+ +H FALK  ++ D++VG+++I MY   G +E + +VFD + +  L
Sbjct: 210 YDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNL 262



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
 Frame = +3

Query: 9   LFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNR--IQPDETVITSVLVACSQL 182
           +F+ +  RNLVSWN ++    ++    E+  LF  L+     + PD   + +V+  C++ 
Sbjct: 253 VFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQ 312

Query: 183 SDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKREML 341
            ++RLG   H  ALK  L  +L V SS++DMY+  G + +++ +FD  ++ ++
Sbjct: 313 GEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEKNVI 365


>ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
            [Cucumis sativus]
          Length = 990

 Score =  142 bits (358), Expect(2) = 4e-62
 Identities = 61/114 (53%), Positives = 88/114 (77%)
 Frame = +2

Query: 332  RDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGIKC 511
            ++V SW  +ITG+G+HG+G +A+ LF++M+    +PD FT++G+L AC H GL+ EG+  
Sbjct: 682  KEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNY 741

Query: 512  LNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
            L +MQ L+ L+P+LEH+ACVIDMLGRAGR ++A+  I  MP +PDA IW+SLLS
Sbjct: 742  LAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLS 795



 Score =  122 bits (305), Expect(2) = 4e-62
 Identities = 57/108 (52%), Positives = 80/108 (74%)
 Frame = +3

Query: 3   KVLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNRIQPDETVITSVLVACSQL 182
           +  FE + D+N V WN M+SGYS++E PNEA++LF  ++ + ++PDE  I S+L ACSQL
Sbjct: 572 RTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631

Query: 183 SDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHL 326
           S L LGKE+HCFALK  L++D +V  S++DMYA SG +  SQR+F+ L
Sbjct: 632 SALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRL 679



 Score = 63.9 bits (154), Expect(2) = 5e-15
 Identities = 32/106 (30%), Positives = 61/106 (57%)
 Frame = +3

Query: 9   LFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNRIQPDETVITSVLVACSQLSD 188
           +F G+  +++ SWN +I G++++  P +A++ +  +    I PD+  I S+L+AC +L  
Sbjct: 473 VFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGL 532

Query: 189 LRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHL 326
           L+ GKEIH F L+  L  + +V  S++ +Y H       +  F+ +
Sbjct: 533 LQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERM 578



 Score = 42.7 bits (99), Expect(2) = 5e-15
 Identities = 28/114 (24%), Positives = 55/114 (48%)
 Frame = +2

Query: 332 RDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGIKC 511
           ++ V W  +++GY  +    EAL+LF++M   GL+PD      IL AC  +  +  G K 
Sbjct: 581 KNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLG-KE 639

Query: 512 LNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
           ++   + + L         ++DM  ++G    +  +   +  K + A WN +++
Sbjct: 640 VHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGK-EVASWNVMIT 692



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 37/114 (32%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3   KVLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLF-HILMYNRIQPDETVITSVLVACSQ 179
           +++F+ + ++NL  WN ++SGY ++E  +EAI+ F  ++     QPD      ++ AC+ 
Sbjct: 163 RLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTG 222

Query: 180 LSDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKREML 341
             D+ LGK +H  A+K  LI DL+VG+++I +Y   G ++++  +FD +  + L
Sbjct: 223 KCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNL 276



 Score = 50.1 bits (118), Expect(2) = 7e-13
 Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
 Frame = +3

Query: 6   VLFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNR--IQPDETVITSVLVACSQ 179
           +LF  IE++++VSWN MI  YS+     E  +L   +      ++ +E  I ++L AC +
Sbjct: 369 ILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLE 428

Query: 180 LSDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVF 317
            S+L   + +H ++L+        + ++ I  YA  GS+  ++ VF
Sbjct: 429 ESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVF 474



 Score = 49.3 bits (116), Expect(2) = 7e-13
 Identities = 31/114 (27%), Positives = 59/114 (51%)
 Frame = +2

Query: 332 RDVVSWTCLITGYGIHGRGEEALNLFQEMQLLGLKPDAFTYIGILMACDHMGLIEEGIKC 511
           + V SW  +I G+  +G   +AL+ + EM  LG+ PD F+ + +L+AC  +GL++ G K 
Sbjct: 480 KSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYG-KE 538

Query: 512 LNEMQILHGLKPQLEHFACVIDMLGRAGRFSDAIELIEAMPMKPDAAIWNSLLS 673
           ++   + +GL+        ++ +     +        E M  K ++  WN++LS
Sbjct: 539 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDK-NSVCWNAMLS 591



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/111 (29%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
 Frame = +3

Query: 9   LFEGIEDRNLVSWNVMISGYSKSEQPNEAINLFHILMYNR--IQPDETVITSVLVACSQL 182
           LF+ + ++NL+SWN +I G+S++    EA   F  L+ +   + PD   + ++L  CS  
Sbjct: 267 LFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGE 326

Query: 183 SDLRLGKEIHCFALKACLIDDLYVGSSVIDMYAHSGSIEQSQRVFDHLKRE 335
            ++ +G  IH  A+K  L+ +L V +++IDMY+  G + ++  +F  ++ +
Sbjct: 327 GNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENK 377