BLASTX nr result

ID: Bupleurum21_contig00001745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001745
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66197.1| hypothetical protein VITISV_008706 [Vitis vinifera]    89   5e-16
ref|XP_002283374.1| PREDICTED: uncharacterized protein LOC100266...    88   8e-16
ref|XP_003591631.1| hypothetical protein MTR_1g090010 [Medicago ...    60   1e-07
ref|XP_002518121.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>emb|CAN66197.1| hypothetical protein VITISV_008706 [Vitis vinifera]
          Length = 170

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 57/135 (42%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
 Frame = +3

Query: 3   RPITSDFLSRSSNSCVDGEENGQIKAPGKSSRVSLSSFLDRKLQKGSDLNKIVKGKQKPF 182
           R ++S FL RSS+S  D ++   +K+P K S VSLS FLDR+L   S L K V+GKQKPF
Sbjct: 14  RSLSSTFLQRSSSSSKDSDQGMPVKSPTKDSHVSLSDFLDRRLHTTSVLPKTVQGKQKPF 73

Query: 183 SSPXXXXXXXXXXXXXXXXXXXXEPKLNGGIDVS-FEQLKHTINGKEGFI-SLSPDVVES 356
           SSP                    E K N  ID+  F+QLKH+   KE FI S   D + S
Sbjct: 74  SSPLGCSNECGSIHGHIGVKKRGEDKANYAIDIQVFKQLKHSRKEKEDFIGSCGVDDIGS 133

Query: 357 STIQDTQGSRKRRNP 401
                   SRKR++P
Sbjct: 134 FHTNTVPESRKRKDP 148


>ref|XP_002283374.1| PREDICTED: uncharacterized protein LOC100266687 [Vitis vinifera]
           gi|297741935|emb|CBI33370.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 56/135 (41%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
 Frame = +3

Query: 3   RPITSDFLSRSSNSCVDGEENGQIKAPGKSSRVSLSSFLDRKLQKGSDLNKIVKGKQKPF 182
           R ++S FL RSS+S  D ++   +K+P K S VSLS FLDR+L   S L K V+GKQKPF
Sbjct: 14  RSLSSTFLQRSSSSSKDSDQGMPVKSPTKDSHVSLSDFLDRRLHTTSVLPKTVQGKQKPF 73

Query: 183 SSPXXXXXXXXXXXXXXXXXXXXEPKLNGGIDVS-FEQLKHTINGKEGFI-SLSPDVVES 356
           SSP                    E K N  ID+  F+QLKH+   KE F+ S   D + S
Sbjct: 74  SSPLGCSNECGSIHGHIGVKKRGEDKANYAIDIQVFKQLKHSRKEKEDFMGSFGVDDIGS 133

Query: 357 STIQDTQGSRKRRNP 401
                   SRKR++P
Sbjct: 134 FHTNTVPESRKRKDP 148


>ref|XP_003591631.1| hypothetical protein MTR_1g090010 [Medicago truncatula]
           gi|92882344|gb|ABE86675.1| hypothetical protein
           MtrDRAFT_AC161864g11v2 [Medicago truncatula]
           gi|355480679|gb|AES61882.1| hypothetical protein
           MTR_1g090010 [Medicago truncatula]
          Length = 230

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 47/137 (34%), Positives = 59/137 (43%), Gaps = 2/137 (1%)
 Frame = +3

Query: 3   RPITSDFLSRSSNSCVDGEENGQIKAPGKSSRVSLSSFLDRKLQKGSDLNKIVKGKQKPF 182
           R ITS F +   NS        Q     +S R+ LS FLDRKL K S +   V GK  PF
Sbjct: 19  RSITSTFRTLPPNS-------NQPSTKTESPRLLLSHFLDRKLHKSSPITHKVPGKSTPF 71

Query: 183 SSPXXXXXXXXXXXXXXXXXXXXEPKLNGGIDVSFEQLKHT-INGKEGF-ISLSPDVVES 356
           +SP                             V  E  KHT  +GK  F I +  D +E+
Sbjct: 72  ASPLGLRVPTRDEVGNVKQIEEERKGATTDDKVILEMFKHTEEDGKNDFVIPVDVDELEN 131

Query: 357 STIQDTQGSRKRRNPYE 407
           S   D Q S+KR+NP+E
Sbjct: 132 SVADDVQESKKRKNPFE 148


>ref|XP_002518121.1| conserved hypothetical protein [Ricinus communis]
           gi|223542717|gb|EEF44254.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 47/156 (30%), Positives = 64/156 (41%), Gaps = 25/156 (16%)
 Frame = +3

Query: 15  SDFLSRSSNSCVDGEENGQIKAPGKSSRVSLSSFLDRKLQKGSDLNKIVKGKQKPFSSPX 194
           S F   SSN   D +++   +   K+S +S S FLD+KL     +NK VKGK +PF SP 
Sbjct: 19  SFFSGSSSNLGKDSKDDVLKEGTWKNSSISFSDFLDQKLHTDHVVNKTVKGKSRPFKSPL 78

Query: 195 XXXXXXXXXXXXXXXXXXXEPKLNGGID-VSFEQLK-----------------------H 302
                              E + N  ID + FEQ K                       H
Sbjct: 79  GSRDDCGSINHLIGTRKVEEVEKNSAIDQLVFEQFKPTSAEKGDNNIGSGDGGDGGDVEH 138

Query: 303 TINGKEGFISLS-PDVVESSTIQDTQGSRKRRNPYE 407
             +G    + LS  D + SS   +   +RKRRNP+E
Sbjct: 139 ATSGTAVGVDLSLVDKIGSSNSNNEHVTRKRRNPFE 174


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