BLASTX nr result
ID: Bupleurum21_contig00001717
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00001717
(859 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloro... 150 7e-49
gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides] 147 1e-48
emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera] 148 1e-47
ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloro... 148 2e-47
sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, ... 149 5e-45
>ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1
[Cucumis sativus] gi|449441698|ref|XP_004138619.1|
PREDICTED: 50S ribosomal protein L27, chloroplastic-like
isoform 2 [Cucumis sativus]
gi|449518795|ref|XP_004166421.1| PREDICTED: 50S
ribosomal protein L27, chloroplastic-like isoform 1
[Cucumis sativus] gi|449518797|ref|XP_004166422.1|
PREDICTED: 50S ribosomal protein L27, chloroplastic-like
isoform 2 [Cucumis sativus]
Length = 183
Score = 150 bits (379), Expect(2) = 7e-49
Identities = 76/107 (71%), Positives = 87/107 (81%)
Frame = -1
Query: 760 MSLSLIGAFKXXXXXXXXXSTCFKGDFGSIHVGQKLTVTFPMNPPLTIESAHKKGAGSTK 581
M+L+L+ +FK + FKGDFGSIH KL+V+FP PLTIE+AHKKGAGSTK
Sbjct: 1 MTLNLLSSFKGLSLASSS--SFFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTK 58
Query: 580 NGRDSAGKRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHT 440
NGRDS G+RLGVKI+GDQVAKPG+IIVRQRGTKFH GKNVGLGKDHT
Sbjct: 59 NGRDSKGQRLGVKIFGDQVAKPGSIIVRQRGTKFHAGKNVGLGKDHT 105
Score = 70.5 bits (171), Expect(2) = 7e-49
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = -3
Query: 344 PRIVVPENPDSYRARKRESFRVQRERRKARKEASLSVPQLILASATDTTAEEPNC 180
PR V PENP+SYRARKRE FR+QRER+KARKE ++ PQL+LAS TD P C
Sbjct: 130 PREVQPENPNSYRARKREYFRLQRERKKARKEGIIAQPQLLLAS-TDDVETNPVC 183
>gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 197
Score = 147 bits (370), Expect(2) = 1e-48
Identities = 77/118 (65%), Positives = 85/118 (72%), Gaps = 6/118 (5%)
Frame = -1
Query: 775 MAATAMSLSLIGAFKXXXXXXXXXSTCFKGDFGSIHVGQKLTVTFPMNPP------LTIE 614
MA A+S +LIG+FK S+ FKGD GS+ G K + P P LTI+
Sbjct: 1 MALMAVSFNLIGSFKGLSLSSSSSSSFFKGDAGSLKFGLKSSALLPFKAPVKAPLPLTIQ 60
Query: 613 SAHKKGAGSTKNGRDSAGKRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHT 440
AHKKGAGSTKNGRDS GKRLGVKIYGDQ AKPGAIIVRQRGTKFHPGKNVG+GKDHT
Sbjct: 61 MAHKKGAGSTKNGRDSKGKRLGVKIYGDQAAKPGAIIVRQRGTKFHPGKNVGIGKDHT 118
Score = 73.6 bits (179), Expect(2) = 1e-48
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = -3
Query: 344 PRIVVPENPDSYRARKRESFRVQRERRKARKEASLSVPQLILASATDTTAEEPNC 180
PR + PENP+SYRARKRE+FR+QRER+KARKE ++ PQL+LAS D P C
Sbjct: 143 PREIQPENPNSYRARKRENFRLQRERKKARKEGIVAQPQLVLASNVDAADSNPVC 197
>emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]
Length = 186
Score = 148 bits (374), Expect(2) = 1e-47
Identities = 78/107 (72%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = -1
Query: 757 SLSLIGAFKXXXXXXXXXSTCFKGDFGSIHVGQKLTVTFPMNP-PLTIESAHKKGAGSTK 581
SL+L+GAFK + +GD GSI KL V+FP+ PLTIESAHKKGAGSTK
Sbjct: 3 SLNLVGAFKGLSLSSTS--SFLRGDLGSITGSSKLCVSFPLKSLPLTIESAHKKGAGSTK 60
Query: 580 NGRDSAGKRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHT 440
NGRDS G+RLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHT
Sbjct: 61 NGRDSRGQRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHT 107
Score = 68.2 bits (165), Expect(2) = 1e-47
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -3
Query: 344 PRIVVPENPDSYRARKRESFRVQRERRKARKEASLSVPQLILASATDTTAEEPNC 180
P ++ PENP+S RA+KRE FR+QRER+KARKE + PQL+LASA + T P C
Sbjct: 132 PXVLQPENPNSCRAKKREYFRMQRERKKARKEGIVPQPQLVLASANEATDGNPIC 186
>ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloroplastic [Vitis
vinifera] gi|296082339|emb|CBI21344.3| unnamed protein
product [Vitis vinifera]
Length = 186
Score = 148 bits (374), Expect(2) = 2e-47
Identities = 78/107 (72%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = -1
Query: 757 SLSLIGAFKXXXXXXXXXSTCFKGDFGSIHVGQKLTVTFPMNP-PLTIESAHKKGAGSTK 581
SL+L+GAFK + +GD GSI KL V+FP+ PLTIESAHKKGAGSTK
Sbjct: 3 SLNLVGAFKGLSLSSTS--SFLRGDLGSITGSSKLCVSFPLKSLPLTIESAHKKGAGSTK 60
Query: 580 NGRDSAGKRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHT 440
NGRDS G+RLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHT
Sbjct: 61 NGRDSRGQRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHT 107
Score = 67.4 bits (163), Expect(2) = 2e-47
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -3
Query: 344 PRIVVPENPDSYRARKRESFRVQRERRKARKEASLSVPQLILASATDTTAEEPNC 180
P ++ PENP+S RA+KRE FR+QRER+KARKE + PQL+LASA + T P C
Sbjct: 132 PCVLQPENPNSCRAKKREYFRMQRERKKARKEGIVPQPQLVLASANEATDGNPIC 186
>sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, chloroplastic; AltName:
Full=CL27; Flags: Precursor gi|170306|gb|AAA34104.1|
ribosomal protein L27 [Nicotiana tabacum]
gi|170326|gb|AAA34115.1| ribosomal protein L27
[Nicotiana tabacum]
Length = 179
Score = 149 bits (377), Expect(2) = 5e-45
Identities = 77/109 (70%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Frame = -1
Query: 763 AMSLSLIGAFKXXXXXXXXXSTCFKGDFGSIH-VGQKLTVTFPMNPPLTIESAHKKGAGS 587
A+S SL+GAFK + KGDFG+ V K +V+FP+ PLTIESAHKKGAGS
Sbjct: 2 AVSFSLVGAFKGLSLASSS--SFLKGDFGAAFPVAPKFSVSFPLKSPLTIESAHKKGAGS 59
Query: 586 TKNGRDSAGKRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHT 440
TKNGRDS G+RLGVKI+GDQVAKPG+IIVRQRGTKFHPGKNVGLGKDHT
Sbjct: 60 TKNGRDSPGQRLGVKIFGDQVAKPGSIIVRQRGTKFHPGKNVGLGKDHT 108
Score = 58.5 bits (140), Expect(2) = 5e-45
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = -3
Query: 344 PRIVVPENPDSYRARKRESFRVQRERRKARKEASLSVPQLILASATDT 201
PR V PENP+SYR RKRESFR+QRERRKAR+E +IL S+ DT
Sbjct: 133 PREVQPENPNSYRNRKRESFRLQRERRKARREG------VILQSSVDT 174