BLASTX nr result

ID: Bupleurum21_contig00001693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001693
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285422.1| PREDICTED: 40S ribosomal protein S11 [Vitis ...   263   2e-68
ref|XP_003609505.1| 40S ribosomal protein S11 [Medicago truncatu...   262   4e-68
ref|XP_002267523.1| PREDICTED: 40S ribosomal protein S11 [Vitis ...   262   5e-68
ref|XP_003629390.1| 40S ribosomal protein S11 [Medicago truncatu...   261   7e-68
ref|XP_004144894.1| PREDICTED: 40S ribosomal protein S11-3-like ...   259   5e-67

>ref|XP_002285422.1| PREDICTED: 40S ribosomal protein S11 [Vitis vinifera]
           gi|296082102|emb|CBI21107.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  263 bits (673), Expect = 2e-68
 Identities = 129/145 (88%), Positives = 132/145 (91%)
 Frame = -2

Query: 607 MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXGNRFYKSVGLGFKTPREAIEGTYIDKKCP 428
           MAEQTEKAFLKQPKVFLCS            GNRF+KS+GLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKGGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 427 FTGDVSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 248
           FTG VSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGGVSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 247 GDHVIIGQCRPLSKTVRFNVLKVIP 173
           GDHVIIGQCRPLSKTVRFNVLKVIP
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIP 145


>ref|XP_003609505.1| 40S ribosomal protein S11 [Medicago truncatula]
           gi|217075074|gb|ACJ85897.1| unknown [Medicago
           truncatula] gi|355510560|gb|AES91702.1| 40S ribosomal
           protein S11 [Medicago truncatula]
           gi|388497962|gb|AFK37047.1| unknown [Medicago
           truncatula]
          Length = 160

 Score =  262 bits (670), Expect = 4e-68
 Identities = 129/160 (80%), Positives = 137/160 (85%)
 Frame = -2

Query: 607 MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXGNRFYKSVGLGFKTPREAIEGTYIDKKCP 428
           MAEQTEKAFLKQPKVFLCS            GNRF+KSVGLGFKTPREAI+GTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFFKSVGLGFKTPREAIDGTYIDKKCP 60

Query: 427 FTGDVSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 248
           FTG+VSIRGRILAGTCHSAKM RTI+VRRNYLH++KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 247 GDHVIIGQCRPLSKTVRFNVLKVIPXXXXXXXXXXAFTGV 128
           GDHVIIGQCRPLSKTVRFNVLKVIP          AFTG+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFTGM 160


>ref|XP_002267523.1| PREDICTED: 40S ribosomal protein S11 [Vitis vinifera]
           gi|296084564|emb|CBI25585.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  262 bits (669), Expect = 5e-68
 Identities = 131/160 (81%), Positives = 135/160 (84%)
 Frame = -2

Query: 607 MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXGNRFYKSVGLGFKTPREAIEGTYIDKKCP 428
           MAEQTEKAFLKQPKVFLCS            GNRF+KS+GLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 427 FTGDVSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 248
           FTG VSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAH SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHTSPCFRVKE 120

Query: 247 GDHVIIGQCRPLSKTVRFNVLKVIPXXXXXXXXXXAFTGV 128
           GDHVIIGQCRPLSKTVRFNVLKVIP          AFT +
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGGKKAFTAM 160


>ref|XP_003629390.1| 40S ribosomal protein S11 [Medicago truncatula]
           gi|217071062|gb|ACJ83891.1| unknown [Medicago
           truncatula] gi|355523412|gb|AET03866.1| 40S ribosomal
           protein S11 [Medicago truncatula]
           gi|388491240|gb|AFK33686.1| unknown [Medicago
           truncatula]
          Length = 160

 Score =  261 bits (668), Expect = 7e-68
 Identities = 130/160 (81%), Positives = 136/160 (85%)
 Frame = -2

Query: 607 MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXGNRFYKSVGLGFKTPREAIEGTYIDKKCP 428
           MAEQTEKAFLKQPKVFLCS            GNRF+KSVGLGFKTPREA EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSVGLGFKTPREATEGTYIDKKCP 60

Query: 427 FTGDVSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 248
           FTG+VSIRGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 247 GDHVIIGQCRPLSKTVRFNVLKVIPXXXXXXXXXXAFTGV 128
           GDHVIIGQCRPLSKTVRFNVLKVIP          AFTG+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAGKKAFTGM 160


>ref|XP_004144894.1| PREDICTED: 40S ribosomal protein S11-3-like [Cucumis sativus]
           gi|449471994|ref|XP_004153463.1| PREDICTED: 40S
           ribosomal protein S11-3-like [Cucumis sativus]
           gi|449522568|ref|XP_004168298.1| PREDICTED: 40S
           ribosomal protein S11-3-like [Cucumis sativus]
          Length = 159

 Score =  259 bits (661), Expect = 5e-67
 Identities = 126/145 (86%), Positives = 131/145 (90%)
 Frame = -2

Query: 607 MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXGNRFYKSVGLGFKTPREAIEGTYIDKKCP 428
           MAEQTEKAFLKQPKVFLCS            GNRF+K++GLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGNKPGKGGNRFWKNIGLGFKTPRDAIEGTYIDKKCP 60

Query: 427 FTGDVSIRGRILAGTCHSAKMMRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 248
           F G VSIRGRILAGTCHSAKM+RTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 247 GDHVIIGQCRPLSKTVRFNVLKVIP 173
           GDHVIIGQCRPLSKTVRFNVLKVIP
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIP 145


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