BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001684
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...   594   e-167
emb|CBI37850.3| unnamed protein product [Vitis vinifera]              587   e-165
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...   528   e-148
ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glyc...   523   e-146
ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glyc...   516   e-144

>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score =  594 bits (1532), Expect = e-167
 Identities = 303/426 (71%), Positives = 345/426 (80%)
 Frame = -3

Query: 1280 DKEIKEPDPDNRIHKEKKXXXXXXXXXXXXXXXXXXXDQRTVFAYQICLKADERDVYEFF 1101
            ++EI+E D + R HK+KK                    QRTVFAYQICLKADERDVYEFF
Sbjct: 187  EREIRERDRETRRHKDKKEEVAEPEADPERD-------QRTVFAYQICLKADERDVYEFF 239

Query: 1100 SRAGKVRDVRLIMDRKSKRSRGVGYIEFYNAMAVPMAIALSGQTLLSHPVMVKPSEAEKN 921
            SRAGKVRDVRLIMDR S+RS+GVGYIEFY+AM+VPMAIALSGQ LL  PVMVKPSEAEKN
Sbjct: 240  SRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKN 299

Query: 920  LVQSTTSXXXXXXXXXXXXXXXARRLYVGNLHYDIKEDQLRQVFESFGSVELVQLPLDQE 741
            LVQSTT+               ARRLYVGNLH++I EDQLRQVFE FG+VELVQLP D E
Sbjct: 300  LVQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLE 359

Query: 740  TGHCKGYGFVQFARLEDARAAESLNGQLEIAGRAIKVSAVTDQAGMQDIGAIPGDFDNDE 561
            TGHCKG+GFVQFARLEDARAA+SLNGQL+IAGR IKVS VTDQAG+QDIGA  GDFD+DE
Sbjct: 360  TGHCKGFGFVQFARLEDARAAQSLNGQLDIAGRTIKVSVVTDQAGLQDIGANAGDFDDDE 419

Query: 560  GGGLSLNAQSRAILMQKLDRSGTTSSVTGIMGNPDVNSLGLSQPVPAIHGTAPAVSTLAN 381
            GGGLSLNA+SRAILMQKLDRSGTT  + G +G+P +N+ GL      I G AP VS L  
Sbjct: 420  GGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPVVSPLVA 479

Query: 380  PLVQAPVPPLSRFPAAGLPVPSIIVPSFAIVGVPSECLLLKNMFDPNSESEPDFDLDIKE 201
            PLVQAPVP L+  P AGL VP++ VPS   +GVPSECL+LKNMFDP  E+EPDFDLDIKE
Sbjct: 480  PLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKNMFDPKLETEPDFDLDIKE 539

Query: 200  DVQDECSRYGTLKHIFVDKNTSGFVYLRFDSTQAATSAQRALHGRWFAGKMITATFMVPQ 21
            DVQDECS++GT+KHI+VDKN++GFV+LRF++TQAA SAQRALHGRWFAGKMITATFM+PQ
Sbjct: 540  DVQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQ 599

Query: 20   NYESRF 3
            NYE++F
Sbjct: 600  NYEAKF 605


>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  587 bits (1512), Expect = e-165
 Identities = 294/388 (75%), Positives = 331/388 (85%)
 Frame = -3

Query: 1166 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRKSKRSRGVGYIEFYNAMAVPMAI 987
            QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR S+RS+GVGYIEFY+AM+VPMAI
Sbjct: 36   QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 95

Query: 986  ALSGQTLLSHPVMVKPSEAEKNLVQSTTSXXXXXXXXXXXXXXXARRLYVGNLHYDIKED 807
            ALSGQ LL  PVMVKPSEAEKNLVQSTT+               ARRLYVGNLH++I ED
Sbjct: 96   ALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNITED 155

Query: 806  QLRQVFESFGSVELVQLPLDQETGHCKGYGFVQFARLEDARAAESLNGQLEIAGRAIKVS 627
            QLRQVFE FG+VELVQLP D ETGHCKG+GFVQFARLEDARAA+SLNGQL+IAGR IKVS
Sbjct: 156  QLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLNGQLDIAGRTIKVS 215

Query: 626  AVTDQAGMQDIGAIPGDFDNDEGGGLSLNAQSRAILMQKLDRSGTTSSVTGIMGNPDVNS 447
             VTDQAG+QDIGA  GDFD+DEGGGLSLNA+SRAILMQKLDRSGTT  + G +G+P +N+
Sbjct: 216  VVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNN 275

Query: 446  LGLSQPVPAIHGTAPAVSTLANPLVQAPVPPLSRFPAAGLPVPSIIVPSFAIVGVPSECL 267
             GL      I G AP VS L  PLVQAPVP L+  P AGL VP++ VPS   +GVPSECL
Sbjct: 276  PGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECL 335

Query: 266  LLKNMFDPNSESEPDFDLDIKEDVQDECSRYGTLKHIFVDKNTSGFVYLRFDSTQAATSA 87
            +LKNMFDP  E+EPDFDLDIKEDVQDECS++GT+KHI+VDKN++GFV+LRF++TQAA SA
Sbjct: 336  MLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISA 395

Query: 86   QRALHGRWFAGKMITATFMVPQNYESRF 3
            QRALHGRWFAGKMITATFM+PQNYE++F
Sbjct: 396  QRALHGRWFAGKMITATFMLPQNYEAKF 423


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
            gi|223544486|gb|EEF46005.1| splicing factor, putative
            [Ricinus communis]
          Length = 609

 Score =  528 bits (1361), Expect = e-148
 Identities = 282/427 (66%), Positives = 324/427 (75%), Gaps = 1/427 (0%)
 Frame = -3

Query: 1280 DKEIKEPDPDNR-IHKEKKXXXXXXXXXXXXXXXXXXXDQRTVFAYQICLKADERDVYEF 1104
            ++E +E D ++R  +KEKK                    QRTVFAYQICLKADERDVYEF
Sbjct: 193  ERESRERDRESRRYNKEKKEEAAEPEADPERD-------QRTVFAYQICLKADERDVYEF 245

Query: 1103 FSRAGKVRDVRLIMDRKSKRSRGVGYIEFYNAMAVPMAIALSGQTLLSHPVMVKPSEAEK 924
            FSRAGKVRDVRLIMDR S+RS+GVGYIEFY+ M+VPMAIALSGQ LL  PVMVKPSEAEK
Sbjct: 246  FSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEK 305

Query: 923  NLVQSTTSXXXXXXXXXXXXXXXARRLYVGNLHYDIKEDQLRQVFESFGSVELVQLPLDQ 744
            NLVQSTT+                RRLYVGNLH++I EDQLRQVFE FG VELVQLPLD 
Sbjct: 306  NLVQSTTTVNAGSGPYSGGA----RRLYVGNLHFNITEDQLRQVFEPFGIVELVQLPLD- 360

Query: 743  ETGHCKGYGFVQFARLEDARAAESLNGQLEIAGRAIKVSAVTDQAGMQDIGAIPGDFDND 564
            ETGHCKG+GFVQFARLEDA+ A +LNGQ+EIAGR IKVS VTDQ GMQD     GDFD+D
Sbjct: 361  ETGHCKGFGFVQFARLEDAKNALNLNGQVEIAGRPIKVSTVTDQTGMQDSTTNAGDFDDD 420

Query: 563  EGGGLSLNAQSRAILMQKLDRSGTTSSVTGIMGNPDVNSLGLSQPVPAIHGTAPAVSTLA 384
            EGGGL+LNA+SRAILMQKLDRSGT SS+ G +G     S GL+ P   I G AP +  + 
Sbjct: 421  EGGGLALNARSRAILMQKLDRSGTASSIAGSLGT-SAASTGLAVPTAPILGAAPVIPPIV 479

Query: 383  NPLVQAPVPPLSRFPAAGLPVPSIIVPSFAIVGVPSECLLLKNMFDPNSESEPDFDLDIK 204
             PL+    P     P A + +P  I PS   +GVPSECLLLKNMFDP+ E+EPDFDLDIK
Sbjct: 480  APLISGSAPAFPGLPGASVQLPGAI-PSVDTIGVPSECLLLKNMFDPSIETEPDFDLDIK 538

Query: 203  EDVQDECSRYGTLKHIFVDKNTSGFVYLRFDSTQAATSAQRALHGRWFAGKMITATFMVP 24
            EDVQ ECS++G L+HI+VDKN++GFVYLRF++TQ+A SAQRALHGRWFAGKMITATFMVP
Sbjct: 539  EDVQLECSKFGNLQHIYVDKNSAGFVYLRFENTQSAISAQRALHGRWFAGKMITATFMVP 598

Query: 23   QNYESRF 3
            Q YE++F
Sbjct: 599  QVYETKF 605


>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 597

 Score =  523 bits (1348), Expect = e-146
 Identities = 278/425 (65%), Positives = 319/425 (75%)
 Frame = -3

Query: 1277 KEIKEPDPDNRIHKEKKXXXXXXXXXXXXXXXXXXXDQRTVFAYQICLKADERDVYEFFS 1098
            +E +E D  +R HKEKK                    QRTVFAYQI LKADERDVYEFFS
Sbjct: 192  RESRERDRQDRRHKEKKEEATEPEADPERD-------QRTVFAYQISLKADERDVYEFFS 244

Query: 1097 RAGKVRDVRLIMDRKSKRSRGVGYIEFYNAMAVPMAIALSGQTLLSHPVMVKPSEAEKNL 918
            RAGKVRDVRLIMDR S+RS+GVGYIEFY+ M+VPMAIALSGQ LL  PVMVKPSEAEKNL
Sbjct: 245  RAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNL 304

Query: 917  VQSTTSXXXXXXXXXXXXXXXARRLYVGNLHYDIKEDQLRQVFESFGSVELVQLPLDQET 738
            VQSTTS               AR+LYVGNLH  I E  +R+VFE+FG VELVQLPLD E+
Sbjct: 305  VQSTTSVANGLTGLIGPYSGGARKLYVGNLHVSITEADIRRVFEAFGQVELVQLPLD-ES 363

Query: 737  GHCKGYGFVQFARLEDARAAESLNGQLEIAGRAIKVSAVTDQAGMQDIGAIPGDFDNDEG 558
            GHCKG+GFVQFARLEDAR A+SLNGQLEI GR IKVSAVTDQ+GMQ++G   GDFD+DEG
Sbjct: 364  GHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVSAVTDQSGMQEVGGNTGDFDDDEG 423

Query: 557  GGLSLNAQSRAILMQKLDRSGTTSSVTGIMGNPDVNSLGLSQPVPAIHGTAPAVSTLANP 378
            GGLSLNA SRAILMQKLDRSGT SS+ G +GN  VN+ GL+ P               N 
Sbjct: 424  GGLSLNACSRAILMQKLDRSGTASSMVGSIGNSGVNNTGLNLPATG------------NI 471

Query: 377  LVQAPVPPLSRFPAAGLPVPSIIVPSFAIVGVPSECLLLKNMFDPNSESEPDFDLDIKED 198
            L  APV  L+     GL +P+  +PS   +GVPSECL+LKNMFDP  E+EPDFDLDIKED
Sbjct: 472  LAAAPVGGLA---GGGLQIPTATIPSIDPIGVPSECLMLKNMFDPKDETEPDFDLDIKED 528

Query: 197  VQDECSRYGTLKHIFVDKNTSGFVYLRFDSTQAATSAQRALHGRWFAGKMITATFMVPQN 18
            V+ ECS++G LKHI+VDK ++GFVYLRF+ TQ+A SAQ+ALHGRWFAGKMITA+FMVPQ+
Sbjct: 529  VEAECSKFGALKHIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQS 588

Query: 17   YESRF 3
            YE +F
Sbjct: 589  YEDKF 593


>ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 600

 Score =  516 bits (1330), Expect = e-144
 Identities = 275/425 (64%), Positives = 316/425 (74%)
 Frame = -3

Query: 1277 KEIKEPDPDNRIHKEKKXXXXXXXXXXXXXXXXXXXDQRTVFAYQICLKADERDVYEFFS 1098
            +E +E D +NR HKEKK                    QR VFAYQI LKADERDV+EFFS
Sbjct: 196  RESREHDRENRRHKEKKEETTEPADPERD--------QRAVFAYQISLKADERDVFEFFS 247

Query: 1097 RAGKVRDVRLIMDRKSKRSRGVGYIEFYNAMAVPMAIALSGQTLLSHPVMVKPSEAEKNL 918
            RAGKVRDVRLIMDR S+RS+GVGYIEFY+ M+VPMAIALSGQ LL  PVMVKPSEAEKNL
Sbjct: 248  RAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNL 307

Query: 917  VQSTTSXXXXXXXXXXXXXXXARRLYVGNLHYDIKEDQLRQVFESFGSVELVQLPLDQET 738
            VQSTTS               AR+LYVGNLH  I E  +R+VFE+FG VELVQLPLD E+
Sbjct: 308  VQSTTSVANGLTGLIGPYSGGARKLYVGNLHISITEADIRRVFEAFGQVELVQLPLD-ES 366

Query: 737  GHCKGYGFVQFARLEDARAAESLNGQLEIAGRAIKVSAVTDQAGMQDIGAIPGDFDNDEG 558
            GHCKG+GFVQFARLEDAR A+SLNGQLEI GR IKVSAVTDQ+GMQ+ G   GDFD+DEG
Sbjct: 367  GHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVSAVTDQSGMQEFGGNTGDFDDDEG 426

Query: 557  GGLSLNAQSRAILMQKLDRSGTTSSVTGIMGNPDVNSLGLSQPVPAIHGTAPAVSTLANP 378
            GG+SLNA SRA+LMQKLDRSGT SS+ G +GN  VN+ GL+ P               N 
Sbjct: 427  GGMSLNACSRAMLMQKLDRSGTASSMVGSLGNSVVNNTGLNLPATG------------NI 474

Query: 377  LVQAPVPPLSRFPAAGLPVPSIIVPSFAIVGVPSECLLLKNMFDPNSESEPDFDLDIKED 198
            L  APV  L+     GL +P+  +PS   +GV SECL+LKNMFDP  E EPDFDLDIKED
Sbjct: 475  LAAAPVGELA---GGGLQIPTATIPSIDTIGVASECLMLKNMFDPKDEIEPDFDLDIKED 531

Query: 197  VQDECSRYGTLKHIFVDKNTSGFVYLRFDSTQAATSAQRALHGRWFAGKMITATFMVPQN 18
            V+ ECS+ GTLKHI+VDK ++GFVYLRF+ TQ+A SAQ+ALHGRWFAGKMITA+FMVPQ+
Sbjct: 532  VEAECSKLGTLKHIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQS 591

Query: 17   YESRF 3
            YE +F
Sbjct: 592  YEDKF 596