BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001682
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [...   420   e-115
ref|XP_002283195.1| PREDICTED: proteasome subunit beta type-6 [V...   416   e-114
ref|NP_194858.1| proteasome subunit beta type-6 [Arabidopsis tha...   408   e-111
ref|XP_004138776.1| PREDICTED: proteasome subunit beta type-6-li...   408   e-111
ref|XP_002869337.1| hypothetical protein ARALYDRAFT_328593 [Arab...   407   e-111

>ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
            gi|223532621|gb|EEF34407.1| proteasome subunit beta type
            6,9, putative [Ricinus communis]
          Length = 231

 Score =  420 bits (1080), Expect = e-115
 Identities = 205/231 (88%), Positives = 221/231 (95%)
 Frame = +3

Query: 513  MNLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSAA 692
            M+L APHSMGTTIIGVTY+GGVVLGADSRTSTGMYVANRASDKITQLTDNVY+CRSGSAA
Sbjct: 1    MDLKAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAA 60

Query: 693  DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNMLQTGIIVGGWDKYEGGK 872
            DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRL+SYNNKNML+TG+IVGGWDKY+GGK
Sbjct: 61   DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLISYNNKNMLETGLIVGGWDKYDGGK 120

Query: 873  IYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWREGMTKEEAEQLVVKAVSLAIARDGAS 1052
            IYG+PLGGTIIEQPFAI      YLYGFFDQAW+EGMTK+EAEQLVVKAVSLA+ARDGAS
Sbjct: 121  IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAMARDGAS 180

Query: 1053 GGVVRTVIINSDGVTRNFYPGDTLPLWYEELVPQMSLLDILDAPAPEPMNI 1205
            GGVVRTVIINS+GVTRNFYPGD+LPLW+EEL PQ SLLDIL+A +PEPMNI
Sbjct: 181  GGVVRTVIINSEGVTRNFYPGDSLPLWHEELEPQNSLLDILNASSPEPMNI 231


>ref|XP_002283195.1| PREDICTED: proteasome subunit beta type-6 [Vitis vinifera]
          Length = 231

 Score =  416 bits (1070), Expect = e-114
 Identities = 202/231 (87%), Positives = 220/231 (95%)
 Frame = +3

Query: 513  MNLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSAA 692
            M+LNAPH+MGTTIIGVTY+GGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSAA
Sbjct: 1    MDLNAPHTMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSAA 60

Query: 693  DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNMLQTGIIVGGWDKYEGGK 872
            DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRL+SYNNKNML+TG+IVGGWDKYEGGK
Sbjct: 61   DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLVSYNNKNMLETGLIVGGWDKYEGGK 120

Query: 873  IYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWREGMTKEEAEQLVVKAVSLAIARDGAS 1052
            IY +PLGGTIIEQPFAI      YLYGFFDQAW+EGMTK+EAEQLVVKAVSLAIARDGAS
Sbjct: 121  IYAIPLGGTIIEQPFAIGGSGSTYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDGAS 180

Query: 1053 GGVVRTVIINSDGVTRNFYPGDTLPLWYEELVPQMSLLDILDAPAPEPMNI 1205
            GGV+RTVIINS+GVTRNFYPGD+LPLW+EEL PQ SLL++L + +PEPMN+
Sbjct: 181  GGVIRTVIINSEGVTRNFYPGDSLPLWHEELPPQNSLLELLHSSSPEPMNV 231


>ref|NP_194858.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
            gi|334187059|ref|NP_001190879.1| proteasome subunit beta
            type-6 [Arabidopsis thaliana]
            gi|82581522|sp|Q8LD27.2|PSB6_ARATH RecName:
            Full=Proteasome subunit beta type-6; AltName: Full=20S
            proteasome beta subunit A-1; AltName: Full=Proteasome
            component D; AltName: Full=Proteasome subunit beta
            type-1; Flags: Precursor gi|2511594|emb|CAA74028.1|
            multicatalytic endopeptidase complex, proteasome
            precursor, beta subunit [Arabidopsis thaliana]
            gi|2827525|emb|CAA16533.1| multicatalytic endopeptidase
            complex, proteasome precursor, beta subunit [Arabidopsis
            thaliana] gi|3421099|gb|AAC32065.1| 20S proteasome
            subunit PBA1 [Arabidopsis thaliana]
            gi|7270032|emb|CAB79848.1| multicatalytic endopeptidase
            complex, proteasome precursor, beta subunit [Arabidopsis
            thaliana] gi|15450505|gb|AAK96545.1| AT4g31300/F8F16_120
            [Arabidopsis thaliana] gi|16323318|gb|AAL15414.1|
            AT4g31300/F8F16_120 [Arabidopsis thaliana]
            gi|332660487|gb|AEE85887.1| proteasome subunit beta
            type-6 [Arabidopsis thaliana] gi|332660489|gb|AEE85889.1|
            proteasome subunit beta type-6 [Arabidopsis thaliana]
          Length = 233

 Score =  408 bits (1049), Expect = e-111
 Identities = 197/230 (85%), Positives = 216/230 (93%)
 Frame = +3

Query: 510  NMNLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSA 689
            ++NL+APHSMGTTIIGVTY+GGVVLGADSRTSTGMYVANRASDKITQLTDNVY+CRSGSA
Sbjct: 2    DLNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSA 61

Query: 690  ADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNMLQTGIIVGGWDKYEGG 869
            ADSQ+VSDYVRYFLHQHTIQ GQPATVKV+ANL+R+L+YNNKNMLQTG+IVGGWDKYEGG
Sbjct: 62   ADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGG 121

Query: 870  KIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWREGMTKEEAEQLVVKAVSLAIARDGA 1049
            KIYG+PLGGT++EQPFAI      YLYGFFDQAW++ MTKEEAEQLVVKAVSLAIARDGA
Sbjct: 122  KIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGA 181

Query: 1050 SGGVVRTVIINSDGVTRNFYPGDTLPLWYEELVPQMSLLDILDAPAPEPM 1199
            SGGVVRTVIINS+GVTRNFYPGD L LW+EEL PQ SLLDIL+A  PEPM
Sbjct: 182  SGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 231


>ref|XP_004138776.1| PREDICTED: proteasome subunit beta type-6-like [Cucumis sativus]
            gi|449499516|ref|XP_004160837.1| PREDICTED: proteasome
            subunit beta type-6-like [Cucumis sativus]
          Length = 235

 Score =  408 bits (1048), Expect = e-111
 Identities = 198/232 (85%), Positives = 218/232 (93%)
 Frame = +3

Query: 510  NMNLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSA 689
            NM+LNAPHSMGTTIIGVTY GGVVLGADSRTSTG+YVANRASDKIT+LTDNVY+CRSGSA
Sbjct: 4    NMDLNAPHSMGTTIIGVTYKGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSA 63

Query: 690  ADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNMLQTGIIVGGWDKYEGG 869
            ADSQ+VSDYVRYFLHQHTIQLGQPATVKVAANLVRLL+Y+NKNMLQTG+IVGGWDKY+GG
Sbjct: 64   ADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLAYSNKNMLQTGLIVGGWDKYDGG 123

Query: 870  KIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWREGMTKEEAEQLVVKAVSLAIARDGA 1049
            +IYG+PLGGTIIEQPFAI      YLYGFFDQAW+E M++EEAEQLVVKAVSLAIARDGA
Sbjct: 124  RIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEEMSREEAEQLVVKAVSLAIARDGA 183

Query: 1050 SGGVVRTVIINSDGVTRNFYPGDTLPLWYEELVPQMSLLDILDAPAPEPMNI 1205
            SGGVVRTV INS+GVTR FYPGD LPLW+EEL P+ SLLD+L+A +PEPMNI
Sbjct: 184  SGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNI 235


>ref|XP_002869337.1| hypothetical protein ARALYDRAFT_328593 [Arabidopsis lyrata subsp.
            lyrata] gi|297315173|gb|EFH45596.1| hypothetical protein
            ARALYDRAFT_328593 [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score =  407 bits (1047), Expect = e-111
 Identities = 199/231 (86%), Positives = 217/231 (93%), Gaps = 1/231 (0%)
 Frame = +3

Query: 510  NMNLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSA 689
            ++NL+APHSMGTTIIGVTY+GGVVLGADSRTSTGMYVANRASDKITQLTDNVY+CRSGSA
Sbjct: 2    DLNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSA 61

Query: 690  ADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNK-NMLQTGIIVGGWDKYEG 866
            ADSQ+VSDYVRYFLHQHTIQLGQPATVKV+ANL+R+L+YNNK NMLQTG+IVGGWDKYEG
Sbjct: 62   ADSQVVSDYVRYFLHQHTIQLGQPATVKVSANLIRMLAYNNKQNMLQTGLIVGGWDKYEG 121

Query: 867  GKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWREGMTKEEAEQLVVKAVSLAIARDG 1046
            GKIYG+PLGGT++EQPFAI      YLYGFFDQAW+E MTKEEAEQLVVKAVSLAIARDG
Sbjct: 122  GKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKENMTKEEAEQLVVKAVSLAIARDG 181

Query: 1047 ASGGVVRTVIINSDGVTRNFYPGDTLPLWYEELVPQMSLLDILDAPAPEPM 1199
            ASGGVVRTVIINS+GVTRNFYPGD L LW+EEL PQ SLLDIL+A  PEPM
Sbjct: 182  ASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 232