BLASTX nr result

ID: Bupleurum21_contig00001665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001665
         (1251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29799.3| unnamed protein product [Vitis vinifera]              441   e-121
ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vi...   441   e-121
ref|XP_003554160.1| PREDICTED: DNA helicase INO80-like isoform 2...   405   e-110
ref|XP_003554159.1| PREDICTED: DNA helicase INO80-like isoform 1...   405   e-110
ref|XP_003520510.1| PREDICTED: DNA helicase INO80-like [Glycine ...   395   e-107

>emb|CBI29799.3| unnamed protein product [Vitis vinifera]
          Length = 1557

 Score =  441 bits (1135), Expect = e-121
 Identities = 222/349 (63%), Positives = 275/349 (78%), Gaps = 11/349 (3%)
 Frame = -3

Query: 1015 NSYTYSNLFNLEPLMSFQLPRQDDDFDYYGNSSDDESPSSRGGTMTEHTNGKMSKK---- 848
            N +++SNLFNLE LM+FQLP+QDDDFDYYGNSS DES  S+GGTM ++ NG MS++    
Sbjct: 9    NGFSFSNLFNLESLMNFQLPQQDDDFDYYGNSSQDESRGSQGGTMGDYHNGIMSERELSL 68

Query: 847  -------RNAYSSEEDENYSTYISEDRYRSMLGEHVQKYKRRLNNPSPNLGPTRTAMPVL 689
                   +N+   EED NYST+ISE+RYRSMLGEH+QKYKRR  +PSP+  P R  + V 
Sbjct: 69   VSKKRRSQNSEDEEEDGNYSTFISEERYRSMLGEHIQKYKRRFKDPSPSPAPARMGVSVP 128

Query: 688  KGSLGPKERKWGSESRGGSHKMENSSEYLSDMIPQKHGKHNGAEFSSEYKVNRSFYEPAY 509
            K +LG K RK G+E RGG H++E  SE+L+D+ PQK    + A+F+ EY  +R+ YE +Y
Sbjct: 129  KSTLGSKTRKLGNEHRGGLHEVETPSEWLADVGPQKMVGFHDADFAPEYGTSRTIYESSY 188

Query: 508  LDIGDGIAYRIPQTYEKLAASLNLPTTSEICVDEFYLKGTLDLGSLAAMMAANKRVGQRS 329
            LDIG+GIAYRIP  YEKLA +LNLPT S+I V+E+YLK TLDLGSLA MM A+KR G +S
Sbjct: 189  LDIGEGIAYRIPPAYEKLAVTLNLPTFSDIRVEEYYLKSTLDLGSLAEMMTADKRFGPKS 248

Query: 328  RAGIGETRPHYESLQAKLRSQAGNNSIAKFSLKVKDVPLDSTSIPEGAAGGIRRSIMSEG 149
            RAG+GE +  YESLQA+LR+ + +NS+ KFSLKV D+ L+S+SIPEGAAG I+RSI+SEG
Sbjct: 249  RAGMGEPQSQYESLQARLRALSSSNSVQKFSLKVSDIALNSSSIPEGAAGSIQRSILSEG 308

Query: 148  GVLQVYYVKVLEKGDTY*IIERSLPKKQKVKKDASVIEREEMEKIGKCW 2
            G LQVYYVKVLEKGDTY IIERSLPKKQKVKKD S+IE+EEME+IGK W
Sbjct: 309  GALQVYYVKVLEKGDTYEIIERSLPKKQKVKKDPSMIEKEEMERIGKVW 357


>ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vinifera]
          Length = 1563

 Score =  441 bits (1135), Expect = e-121
 Identities = 222/349 (63%), Positives = 275/349 (78%), Gaps = 11/349 (3%)
 Frame = -3

Query: 1015 NSYTYSNLFNLEPLMSFQLPRQDDDFDYYGNSSDDESPSSRGGTMTEHTNGKMSKK---- 848
            N +++SNLFNLE LM+FQLP+QDDDFDYYGNSS DES  S+GGTM ++ NG MS++    
Sbjct: 9    NGFSFSNLFNLESLMNFQLPQQDDDFDYYGNSSQDESRGSQGGTMGDYHNGIMSERELSL 68

Query: 847  -------RNAYSSEEDENYSTYISEDRYRSMLGEHVQKYKRRLNNPSPNLGPTRTAMPVL 689
                   +N+   EED NYST+ISE+RYRSMLGEH+QKYKRR  +PSP+  P R  + V 
Sbjct: 69   VSKKRRSQNSEDEEEDGNYSTFISEERYRSMLGEHIQKYKRRFKDPSPSPAPARMGVSVP 128

Query: 688  KGSLGPKERKWGSESRGGSHKMENSSEYLSDMIPQKHGKHNGAEFSSEYKVNRSFYEPAY 509
            K +LG K RK G+E RGG H++E  SE+L+D+ PQK    + A+F+ EY  +R+ YE +Y
Sbjct: 129  KSTLGSKTRKLGNEHRGGLHEVETPSEWLADVGPQKMVGFHDADFAPEYGTSRTIYESSY 188

Query: 508  LDIGDGIAYRIPQTYEKLAASLNLPTTSEICVDEFYLKGTLDLGSLAAMMAANKRVGQRS 329
            LDIG+GIAYRIP  YEKLA +LNLPT S+I V+E+YLK TLDLGSLA MM A+KR G +S
Sbjct: 189  LDIGEGIAYRIPPAYEKLAVTLNLPTFSDIRVEEYYLKSTLDLGSLAEMMTADKRFGPKS 248

Query: 328  RAGIGETRPHYESLQAKLRSQAGNNSIAKFSLKVKDVPLDSTSIPEGAAGGIRRSIMSEG 149
            RAG+GE +  YESLQA+LR+ + +NS+ KFSLKV D+ L+S+SIPEGAAG I+RSI+SEG
Sbjct: 249  RAGMGEPQSQYESLQARLRALSSSNSVQKFSLKVSDIALNSSSIPEGAAGSIQRSILSEG 308

Query: 148  GVLQVYYVKVLEKGDTY*IIERSLPKKQKVKKDASVIEREEMEKIGKCW 2
            G LQVYYVKVLEKGDTY IIERSLPKKQKVKKD S+IE+EEME+IGK W
Sbjct: 309  GALQVYYVKVLEKGDTYEIIERSLPKKQKVKKDPSMIEKEEMERIGKVW 357


>ref|XP_003554160.1| PREDICTED: DNA helicase INO80-like isoform 2 [Glycine max]
          Length = 1542

 Score =  405 bits (1041), Expect = e-110
 Identities = 209/353 (59%), Positives = 263/353 (74%), Gaps = 12/353 (3%)
 Frame = -3

Query: 1024 QSRNSYTYSNLFNLEPLMSFQLPRQDDDFDYYGNSSDDESPSSRGGTMTEHTNGKMSKKR 845
            +S++S +YS LFNLEPLM+FQLP+QDDDFDYYGNSS DES  S GG +T H NG + +K 
Sbjct: 6    KSKDSLSYSTLFNLEPLMNFQLPKQDDDFDYYGNSSQDESRDSEGGGITNHGNGNVHEKE 65

Query: 844  -----------NAYSSEEDENYSTYISEDRYRSMLGEHVQKYKRRLNNPSPNLGPTRTAM 698
                       N+ + E+   Y  +++E+RYRSMLGEH+QKYKRR      +    + A 
Sbjct: 66   VNLFKKRRWSLNSDNEEKTSFYGAHMTEERYRSMLGEHIQKYKRRFKGTLSSPAQNQAAA 125

Query: 697  PVLKGSLGPKERKWGSESRGGS-HKMENSSEYLSDMIPQKHGKHNGAEFSSEYKVNRSFY 521
            P++K + G K RK G+E RGG  H  E++SE+++D   QK G +  A+FS +Y  +R  Y
Sbjct: 126  PLVKSNTGLKARKSGNEHRGGGLHVAESTSEWMNDSSSQKPGNYRDADFSPQYGTDRIMY 185

Query: 520  EPAYLDIGDGIAYRIPQTYEKLAASLNLPTTSEICVDEFYLKGTLDLGSLAAMMAANKRV 341
            EPA LDIGDGI Y+IP  Y+KLA +LNLP+ S+I V++FYLKGTLDLGSLA MMAA+KR 
Sbjct: 186  EPASLDIGDGIIYKIPPVYDKLAGALNLPSFSDIHVEDFYLKGTLDLGSLAEMMAADKRF 245

Query: 340  GQRSRAGIGETRPHYESLQAKLRSQAGNNSIAKFSLKVKDVPLDSTSIPEGAAGGIRRSI 161
            G R+RAG+GE  P +ESLQA+L+  + +NS  KFSLK+ DV L+S SIPEGAAG IRRSI
Sbjct: 246  GNRNRAGMGEAIPQFESLQARLKVMSASNSAHKFSLKMSDVDLNS-SIPEGAAGSIRRSI 304

Query: 160  MSEGGVLQVYYVKVLEKGDTY*IIERSLPKKQKVKKDASVIEREEMEKIGKCW 2
            +SEGGVLQVYYVKVLEKGDTY IIERSLPKKQKVKKD ++IE+EEME+ GK W
Sbjct: 305  LSEGGVLQVYYVKVLEKGDTYEIIERSLPKKQKVKKDPALIEKEEMERCGKIW 357


>ref|XP_003554159.1| PREDICTED: DNA helicase INO80-like isoform 1 [Glycine max]
          Length = 1531

 Score =  405 bits (1041), Expect = e-110
 Identities = 209/353 (59%), Positives = 263/353 (74%), Gaps = 12/353 (3%)
 Frame = -3

Query: 1024 QSRNSYTYSNLFNLEPLMSFQLPRQDDDFDYYGNSSDDESPSSRGGTMTEHTNGKMSKKR 845
            +S++S +YS LFNLEPLM+FQLP+QDDDFDYYGNSS DES  S GG +T H NG + +K 
Sbjct: 6    KSKDSLSYSTLFNLEPLMNFQLPKQDDDFDYYGNSSQDESRDSEGGGITNHGNGNVHEKE 65

Query: 844  -----------NAYSSEEDENYSTYISEDRYRSMLGEHVQKYKRRLNNPSPNLGPTRTAM 698
                       N+ + E+   Y  +++E+RYRSMLGEH+QKYKRR      +    + A 
Sbjct: 66   VNLFKKRRWSLNSDNEEKTSFYGAHMTEERYRSMLGEHIQKYKRRFKGTLSSPAQNQAAA 125

Query: 697  PVLKGSLGPKERKWGSESRGGS-HKMENSSEYLSDMIPQKHGKHNGAEFSSEYKVNRSFY 521
            P++K + G K RK G+E RGG  H  E++SE+++D   QK G +  A+FS +Y  +R  Y
Sbjct: 126  PLVKSNTGLKARKSGNEHRGGGLHVAESTSEWMNDSSSQKPGNYRDADFSPQYGTDRIMY 185

Query: 520  EPAYLDIGDGIAYRIPQTYEKLAASLNLPTTSEICVDEFYLKGTLDLGSLAAMMAANKRV 341
            EPA LDIGDGI Y+IP  Y+KLA +LNLP+ S+I V++FYLKGTLDLGSLA MMAA+KR 
Sbjct: 186  EPASLDIGDGIIYKIPPVYDKLAGALNLPSFSDIHVEDFYLKGTLDLGSLAEMMAADKRF 245

Query: 340  GQRSRAGIGETRPHYESLQAKLRSQAGNNSIAKFSLKVKDVPLDSTSIPEGAAGGIRRSI 161
            G R+RAG+GE  P +ESLQA+L+  + +NS  KFSLK+ DV L+S SIPEGAAG IRRSI
Sbjct: 246  GNRNRAGMGEAIPQFESLQARLKVMSASNSAHKFSLKMSDVDLNS-SIPEGAAGSIRRSI 304

Query: 160  MSEGGVLQVYYVKVLEKGDTY*IIERSLPKKQKVKKDASVIEREEMEKIGKCW 2
            +SEGGVLQVYYVKVLEKGDTY IIERSLPKKQKVKKD ++IE+EEME+ GK W
Sbjct: 305  LSEGGVLQVYYVKVLEKGDTYEIIERSLPKKQKVKKDPALIEKEEMERCGKIW 357


>ref|XP_003520510.1| PREDICTED: DNA helicase INO80-like [Glycine max]
          Length = 1543

 Score =  395 bits (1014), Expect = e-107
 Identities = 208/357 (58%), Positives = 265/357 (74%), Gaps = 16/357 (4%)
 Frame = -3

Query: 1024 QSRNSYTYSNLFNLEPLMSFQLPRQDDDFDYYGNSSDDESPSSRGGTMTEHTNGKMSKKR 845
            +S+ S +YS LFNLE LM+FQLP QD+DFDYYGNSS DES  S+G  +  H+NG + +K 
Sbjct: 6    KSKESLSYSTLFNLESLMNFQLPEQDNDFDYYGNSSQDESRDSQGVGIANHSNGNVHEKE 65

Query: 844  -----------NAYSSEEDENYSTYISEDRYRSMLGEHVQKYKRR----LNNPSPNLGPT 710
                       N+ + E+   Y T+++E+RYRSMLGEH+QKYKRR    LN+P+ N    
Sbjct: 66   VNLFKKRRWSLNSDNEEKSSFYGTHMTEERYRSMLGEHIQKYKRRFKGTLNSPAQN---- 121

Query: 709  RTAMPVLKGSLGPKERKWGSESRGGS-HKMENSSEYLSDMIPQKHGKHNGAEFSSEYKVN 533
            + A+P++K + G K  K G+E RGG  H  E++SE+++D   QK G +  A+FS +Y  +
Sbjct: 122  QAAVPLVKSNTGLKAHKSGNERRGGGLHVAESTSEWMNDSGSQKPGNYRNADFSPQYGTD 181

Query: 532  RSFYEPAYLDIGDGIAYRIPQTYEKLAASLNLPTTSEICVDEFYLKGTLDLGSLAAMMAA 353
            R  YEPA LDIGDGI Y+IP  Y+KLA +LNLP+ S+I V++ YLKGTLDLGSLA MMAA
Sbjct: 182  RIMYEPASLDIGDGIIYKIPPVYDKLAGALNLPSCSDIHVEDLYLKGTLDLGSLAEMMAA 241

Query: 352  NKRVGQRSRAGIGETRPHYESLQAKLRSQAGNNSIAKFSLKVKDVPLDSTSIPEGAAGGI 173
            +KR G R+RAG+GE  P +ESLQA+L+  + +NS  KFSLK+ DV L+S SIPEGAAG I
Sbjct: 242  DKRFGNRNRAGMGEAIPQFESLQARLKVMSASNSARKFSLKMSDVDLNS-SIPEGAAGSI 300

Query: 172  RRSIMSEGGVLQVYYVKVLEKGDTY*IIERSLPKKQKVKKDASVIEREEMEKIGKCW 2
            RRSI+SEGGVLQVYYVKVLEKGDTY IIERSLPKKQKVKKD ++IE+EEME+ GK W
Sbjct: 301  RRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKQKVKKDPALIEKEEMERCGKVW 357


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