BLASTX nr result

ID: Bupleurum21_contig00001661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001661
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298064.1| predicted protein [Populus trichocarpa] gi|2...   201   1e-49
ref|XP_002304468.1| predicted protein [Populus trichocarpa] gi|2...   201   1e-49
ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplast...   199   7e-49
gb|AAF15312.1|AF145053_1 chloroplast translational elongation fa...   197   2e-48
gb|AAK08141.1|AF234537_1 chloroplast translational elongation fa...   197   2e-48

>ref|XP_002298064.1| predicted protein [Populus trichocarpa] gi|222845322|gb|EEE82869.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  201 bits (511), Expect = 1e-49
 Identities = 97/112 (86%), Positives = 98/112 (87%)
 Frame = +2

Query: 416 GKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXXXGGSAPKKYDEIDAAPEERARGITI 595
           GKFERKKPH+NIGTIGHVDHGK              GGSAPKKYDEIDAAPEERARGITI
Sbjct: 78  GKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGGSAPKKYDEIDAAPEERARGITI 137

Query: 596 NTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 751
           NTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ
Sbjct: 138 NTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 189


>ref|XP_002304468.1| predicted protein [Populus trichocarpa] gi|222841900|gb|EEE79447.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  201 bits (511), Expect = 1e-49
 Identities = 97/112 (86%), Positives = 98/112 (87%)
 Frame = +2

Query: 416 GKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXXXGGSAPKKYDEIDAAPEERARGITI 595
           GKFERKKPH+NIGTIGHVDHGK              GGSAPKKYDEIDAAPEERARGITI
Sbjct: 20  GKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGGSAPKKYDEIDAAPEERARGITI 79

Query: 596 NTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 751
           NTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ
Sbjct: 80  NTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 131


>ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform 1
           [Vitis vinifera] gi|359488736|ref|XP_003633809.1|
           PREDICTED: elongation factor Tu, chloroplastic-like
           isoform 2 [Vitis vinifera]
           gi|359488738|ref|XP_003633810.1| PREDICTED: elongation
           factor Tu, chloroplastic-like isoform 3 [Vitis vinifera]
          Length = 487

 Score =  199 bits (505), Expect = 7e-49
 Identities = 96/112 (85%), Positives = 97/112 (86%)
 Frame = +2

Query: 416 GKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXXXGGSAPKKYDEIDAAPEERARGITI 595
           GKFERKKPH+NIGTIGHVDHGK              G SAPKKYDEIDAAPEERARGITI
Sbjct: 82  GKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDEIDAAPEERARGITI 141

Query: 596 NTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 751
           NTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ
Sbjct: 142 NTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 193


>gb|AAF15312.1|AF145053_1 chloroplast translational elongation factor Tu [Oryza sativa
           Japonica Group]
          Length = 467

 Score =  197 bits (502), Expect = 2e-48
 Identities = 95/112 (84%), Positives = 97/112 (86%)
 Frame = +2

Query: 416 GKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXXXGGSAPKKYDEIDAAPEERARGITI 595
           GKFER KPH+NIGTIGHVDHGK              GGSAPKKYDEIDAAPEERARGITI
Sbjct: 62  GKFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARGITI 121

Query: 596 NTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 751
           NTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ
Sbjct: 122 NTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 173


>gb|AAK08141.1|AF234537_1 chloroplast translational elongation factor Tu [Pelargonium
           graveolens]
          Length = 474

 Score =  197 bits (502), Expect = 2e-48
 Identities = 95/112 (84%), Positives = 97/112 (86%)
 Frame = +2

Query: 416 GKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXXXGGSAPKKYDEIDAAPEERARGITI 595
           GKFERKKPH+NIGTIGHVDHGK              G SAPKKYDEIDAAPEERARGITI
Sbjct: 69  GKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASLGNSAPKKYDEIDAAPEERARGITI 128

Query: 596 NTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 751
           NTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ
Sbjct: 129 NTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180


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