BLASTX nr result

ID: Bupleurum21_contig00001650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001650
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15210.3| unnamed protein product [Vitis vinifera]              274   6e-72
ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4...   274   6e-72
ref|XP_002514741.1| chlorophyll A/B binding protein, putative [R...   273   1e-71
gb|AAG40364.1|AF325012_1 AT3g47470 [Arabidopsis thaliana]             273   1e-71
ref|NP_190331.3| chlorophyll a-b binding protein 4 [Arabidopsis ...   273   1e-71

>emb|CBI15210.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  274 bits (700), Expect = 6e-72
 Identities = 125/140 (89%), Positives = 136/140 (97%)
 Frame = -1

Query: 430 PEVFTKMGLINAPEWFDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 251
           PEVFTK+G+INAP+W+DAGK+EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI
Sbjct: 109 PEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 168

Query: 250 FKSYSLPPGEVGYPGGIFNPLNFAPTEGAKEKELANGRLAMLAFLGFVVQHNVTGKGPFE 71
           FK+YSLPP EVGYPGGIFNPLNFAPTE AKEKELANGRLAMLAFLGF+VQHNVTGKGPF+
Sbjct: 169 FKNYSLPPNEVGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFD 228

Query: 70  NLVQHLSDPWHNTIVQTFSG 11
           NL+QH+SDPWHNTI+QT  G
Sbjct: 229 NLLQHISDPWHNTIIQTLRG 248


>ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
           vinifera] gi|147843386|emb|CAN79984.1| hypothetical
           protein VITISV_038035 [Vitis vinifera]
          Length = 252

 Score =  274 bits (700), Expect = 6e-72
 Identities = 125/140 (89%), Positives = 136/140 (97%)
 Frame = -1

Query: 430 PEVFTKMGLINAPEWFDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 251
           PEVFTK+G+INAP+W+DAGK+EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI
Sbjct: 112 PEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 171

Query: 250 FKSYSLPPGEVGYPGGIFNPLNFAPTEGAKEKELANGRLAMLAFLGFVVQHNVTGKGPFE 71
           FK+YSLPP EVGYPGGIFNPLNFAPTE AKEKELANGRLAMLAFLGF+VQHNVTGKGPF+
Sbjct: 172 FKNYSLPPNEVGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFD 231

Query: 70  NLVQHLSDPWHNTIVQTFSG 11
           NL+QH+SDPWHNTI+QT  G
Sbjct: 232 NLLQHISDPWHNTIIQTLRG 251


>ref|XP_002514741.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223546345|gb|EEF47847.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 251

 Score =  273 bits (698), Expect = 1e-71
 Identities = 126/140 (90%), Positives = 134/140 (95%)
 Frame = -1

Query: 430 PEVFTKMGLINAPEWFDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 251
           PEVFTK+G+IN P+W+DAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI
Sbjct: 111 PEVFTKIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 170

Query: 250 FKSYSLPPGEVGYPGGIFNPLNFAPTEGAKEKELANGRLAMLAFLGFVVQHNVTGKGPFE 71
           FK YSLPP EVGYPGGIFNPLNFAPT  AKEKELANGRLAMLAFLGFV+QHNVTGKGPF+
Sbjct: 171 FKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFD 230

Query: 70  NLVQHLSDPWHNTIVQTFSG 11
           NL+QHLSDPWHNTI+QTFSG
Sbjct: 231 NLLQHLSDPWHNTIIQTFSG 250


>gb|AAG40364.1|AF325012_1 AT3g47470 [Arabidopsis thaliana]
          Length = 148

 Score =  273 bits (698), Expect = 1e-71
 Identities = 127/139 (91%), Positives = 134/139 (96%)
 Frame = -1

Query: 430 PEVFTKMGLINAPEWFDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 251
           PEVFTK+G+IN PEW+DAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI
Sbjct: 10  PEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 69

Query: 250 FKSYSLPPGEVGYPGGIFNPLNFAPTEGAKEKELANGRLAMLAFLGFVVQHNVTGKGPFE 71
           FK YSLP GEVGYPGGIFNPLNFAPT+ AKEKELANGRLAMLAFLGFVVQHNVTGKGPFE
Sbjct: 70  FKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFE 129

Query: 70  NLVQHLSDPWHNTIVQTFS 14
           NL+QHLSDPWHNTIVQTF+
Sbjct: 130 NLLQHLSDPWHNTIVQTFN 148


>ref|NP_190331.3| chlorophyll a-b binding protein 4 [Arabidopsis thaliana]
           gi|115385|sp|P27521.1|CA4_ARATH RecName:
           Full=Chlorophyll a-b binding protein 4, chloroplastic;
           AltName: Full=LHCI type III CAB-4; Flags: Precursor
           gi|166646|gb|AAA32760.1| light-harvesting chlorophyll
           a/b binding protein [Arabidopsis thaliana]
           gi|6522530|emb|CAB61973.1| CHLOROPHYLL A-B BINDING
           PROTEIN 4 PRECURSOR homolog [Arabidopsis thaliana]
           gi|20260362|gb|AAM13079.1| chlorophyll A-B binding
           protein 4 precursor homolog [Arabidopsis thaliana]
           gi|21554365|gb|AAM63472.1| chlorophyll a-b binding
           protein 4 precursor homolog [Arabidopsis thaliana]
           gi|23197770|gb|AAN15412.1| chlorophyll A-B binding
           protein 4 precursor homolog [Arabidopsis thaliana]
           gi|332644764|gb|AEE78285.1| chlorophyll a-b binding
           protein 4 [Arabidopsis thaliana]
          Length = 251

 Score =  273 bits (698), Expect = 1e-71
 Identities = 127/139 (91%), Positives = 134/139 (96%)
 Frame = -1

Query: 430 PEVFTKMGLINAPEWFDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 251
           PEVFTK+G+IN PEW+DAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI
Sbjct: 113 PEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 172

Query: 250 FKSYSLPPGEVGYPGGIFNPLNFAPTEGAKEKELANGRLAMLAFLGFVVQHNVTGKGPFE 71
           FK YSLP GEVGYPGGIFNPLNFAPT+ AKEKELANGRLAMLAFLGFVVQHNVTGKGPFE
Sbjct: 173 FKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFE 232

Query: 70  NLVQHLSDPWHNTIVQTFS 14
           NL+QHLSDPWHNTIVQTF+
Sbjct: 233 NLLQHLSDPWHNTIVQTFN 251


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