BLASTX nr result

ID: Bupleurum21_contig00001643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001643
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   136   2e-30
ref|XP_002305229.1| predicted protein [Populus trichocarpa] gi|2...   134   9e-30
ref|XP_003632011.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...   133   2e-29
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   133   2e-29
ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   132   4e-29

>ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3
           [Vitis vinifera]
          Length = 673

 Score =  136 bits (343), Expect = 2e-30
 Identities = 70/122 (57%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
 Frame = +1

Query: 184 DYVRENELKAFDATKLGVKGLVDDGVQKLPRIFIRPPDELSEELNYPKTRLQVPVIDFQG 363
           DY R +ELKAFD +K GVKGL D GV K+PR+FI+PPD L        T+   PV+D QG
Sbjct: 13  DYDRASELKAFDESKTGVKGLADAGVSKVPRMFIQPPDNLRTYT----TQFNFPVVDLQG 68

Query: 364 IEN-PDRHKDIVDQVNKASEEWGFFRVVNHGIPLSVLQGMIDGVRVFHEQDFESKKKLFS 540
           ++N P R   IVD V  ASE WGFF VVNHGIP+SVL+ M++GVR FHEQD E KK+ ++
Sbjct: 69  MDNDPIRRNKIVDMVRDASETWGFFNVVNHGIPVSVLEEMMEGVRRFHEQDTEVKKQFYT 128

Query: 541 YD 546
            D
Sbjct: 129 RD 130



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = +1

Query: 328 TRLQVPVIDFQGIE-NPDRHKDIVDQVNKASEEWGFFRVVNHGIPLSVLQGMIDGVRVFH 504
           T+   PVID Q +  +P R K+IVD V  ASE WGFF VVNHGI ++VL+ M DGVR F+
Sbjct: 366 TKFSFPVIDLQDMNTDPARRKEIVDMVRDASETWGFFNVVNHGISVTVLEEMKDGVRRFY 425

Query: 505 EQDFESKKKLFSYDI 549
           EQD E KK+ +S D+
Sbjct: 426 EQDTEVKKQYYSRDL 440


>ref|XP_002305229.1| predicted protein [Populus trichocarpa] gi|222848193|gb|EEE85740.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  134 bits (337), Expect = 9e-30
 Identities = 67/118 (56%), Positives = 89/118 (75%), Gaps = 3/118 (2%)
 Frame = +1

Query: 202 ELKAFDATKLGVKGLVDDGVQKLPRIFIRPPDE---LSEELNYPKTRLQVPVIDFQGIEN 372
           E+KAFDATK GVKGLVD GV K+PR F+ PP++   LS E N   T LQ+P+ID +G E+
Sbjct: 15  EVKAFDATKAGVKGLVDSGVTKIPRFFVHPPEDVQKLSSETN--STTLQLPIIDLEGFES 72

Query: 373 PDRHKDIVDQVNKASEEWGFFRVVNHGIPLSVLQGMIDGVRVFHEQDFESKKKLFSYD 546
             R  ++V++V KASEEWGFF++VNHGIP++V+ GM+ G + FHEQ  E KK+L+S D
Sbjct: 73  -FRRLEVVNEVRKASEEWGFFQIVNHGIPVTVMDGMLAGAKRFHEQPQEVKKELYSRD 129


>ref|XP_003632011.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Vitis vinifera]
          Length = 362

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/126 (55%), Positives = 90/126 (71%), Gaps = 4/126 (3%)
 Frame = +1

Query: 184 DYVRENELKAFDATKLGVKGLVDDGVQKLPRIFIRPPDEL---SEELNYPKTRLQVPVID 354
           +Y R +ELKAFD +K GVKG+VD GV K+PR+FI+PPD L   S + N+P       VID
Sbjct: 12  EYDRASELKAFDESKAGVKGIVDAGVSKVPRMFIQPPDNLRTCSPQFNFP-------VID 64

Query: 355 FQGIEN-PDRHKDIVDQVNKASEEWGFFRVVNHGIPLSVLQGMIDGVRVFHEQDFESKKK 531
             G+++ P R K+IV+ V +ASE WGFF VVNHGIP SVL+ M+DG R F+EQD E KKK
Sbjct: 65  LHGMDSDPIRRKEIVEMVREASETWGFFTVVNHGIPESVLEEMMDGTRRFYEQDIEVKKK 124

Query: 532 LFSYDI 549
            +S D+
Sbjct: 125 CYSRDL 130


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  133 bits (334), Expect = 2e-29
 Identities = 69/122 (56%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
 Frame = +1

Query: 184 DYVRENELKAFDATKLGVKGLVDDGVQKLPRIFIRPPDELSEELNYPKTRLQVPVIDFQG 363
           DY R +ELKAFD +K GVKGLVD GV K+PR+FI+PPD L        T+   PV+D QG
Sbjct: 13  DYDRASELKAFDESKTGVKGLVDAGVSKVPRMFIQPPDNLRTYT----TQFNFPVVDLQG 68

Query: 364 IEN-PDRHKDIVDQVNKASEEWGFFRVVNHGIPLSVLQGMIDGVRVFHEQDFESKKKLFS 540
           ++N P R   IVD V  ASE WGFF VVNHGIP+SVL+ M++GV  F+EQD E KK+ ++
Sbjct: 69  MDNDPIRRNKIVDMVKDASETWGFFNVVNHGIPVSVLEEMMEGVLRFYEQDTEVKKQFYT 128

Query: 541 YD 546
            D
Sbjct: 129 RD 130


>ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 363

 Score =  132 bits (332), Expect = 4e-29
 Identities = 70/123 (56%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
 Frame = +1

Query: 184 DYVRENELKAFDATKLGVKGLVDDGVQKLPRIFIRPPDELSEELNYPKTRLQVPVIDFQG 363
           DY R +ELKAFD +K GVKGLVD GV K+PR+FIRPPD  S + N   T+ + PVID  G
Sbjct: 12  DYDRASELKAFDESKEGVKGLVDAGVSKVPRMFIRPPDN-SRDCN---TQFKFPVIDLHG 67

Query: 364 IEN-PDRHKDIVDQVNKASEEWGFFRVVNHGIPLSVLQGMIDGVRVFHEQDFESKKKLFS 540
           +++ P R K IV+ V +ASE WG F VVNHGIP+SVL+ M+DGV  F+EQD E KK+ ++
Sbjct: 68  MDSDPIRRKKIVEMVREASETWGLFTVVNHGIPVSVLEEMMDGVHRFYEQDNEVKKEFYT 127

Query: 541 YDI 549
            D+
Sbjct: 128 RDL 130


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