BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001642
         (1788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containi...   663   0.0  
ref|XP_002313976.1| predicted protein [Populus trichocarpa] gi|2...   655   0.0  
ref|XP_002521193.1| conserved hypothetical protein [Ricinus comm...   642   0.0  
ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containi...   637   e-180
ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containi...   634   e-179

>ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
            chloroplastic [Vitis vinifera]
          Length = 511

 Score =  663 bits (1711), Expect = 0.0
 Identities = 339/475 (71%), Positives = 382/475 (80%)
 Frame = -2

Query: 1475 CSRVSGTVCKLKTPNSVVLNKDKVREFGFLKSVELDRFITSTDEDEMSEGFFEAIEELES 1296
            CSR + T+C  + P  VV  +DK+REF   KSVELD+F+TS DEDEMSEGFFEAIEELE 
Sbjct: 46   CSRAT-TICNHQNPRFVVPKRDKIREFRLFKSVELDQFLTSDDEDEMSEGFFEAIEELER 104

Query: 1295 MTREPSDVLEEMNDRLSVRELQLVLVYFSQEGRDSWCALEVFDWLRKENRVDKETMELMV 1116
            MTREPSDVLEEMNDRLS RELQLVLVYFSQEGRDSWCALEVF+WLRKENRVDKETMELMV
Sbjct: 105  MTREPSDVLEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMV 164

Query: 1115 SLMCSWAGKLIEEKNEXXXXXXXXXXXXXXXLKPSFSMIEKVISLYFEMGKKDGAVLFVK 936
            S+MCSW  KLIE +++               LKP FSMIEKVISLY+EM +K+ AVLFVK
Sbjct: 165  SIMCSWVKKLIEGEHDVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEEKEKAVLFVK 224

Query: 935  EILRRGITYSDDDGQGHKGGPTGYLAWKLMEEGNYKDAIKLVIEFKESGLKPEVYSYLIA 756
            E+LRR I YS+DDG GHKGGPTGYLAWK+M EGNY+ A+KLVI  +ESGLKPEVYSYLIA
Sbjct: 225  EVLRREIAYSEDDGDGHKGGPTGYLAWKMMAEGNYRGAVKLVIHLRESGLKPEVYSYLIA 284

Query: 755  MTAVVKELNELAKALRKLKSFAKAGLITGLDRENVRLVEEYQSDLIADGVRLSDWVIQEG 576
            MTAVVKELNE AKALRKLK F K+GLI  LD ENV L+E+YQSDL+ADGVRLS WVIQEG
Sbjct: 285  MTAVVKELNEFAKALRKLKGFTKSGLIAELDAENVELIEKYQSDLLADGVRLSSWVIQEG 344

Query: 575  GPSLQGVVHERLLAMYICAGQGLEAERQLWEMKLEGKEADANLYDMVLAICASQKESNAI 396
               L GVV+ERLLAMYICAG+GLEAERQLWEMKL GKEAD  LYD+VLAICAS+KE++AI
Sbjct: 345  RSPLHGVVYERLLAMYICAGRGLEAERQLWEMKLVGKEADRELYDIVLAICASKKEASAI 404

Query: 395  ARLLMRVEATSSLRKKKTLSWLLRGYIKGGHYSDAAXXXXXXXXXXXXXXXXXXXXXXXX 216
            +RLL  +E TSS+R+KKTLSWLLRGYIKG H+ DA+                        
Sbjct: 405  SRLLTGMEVTSSIRRKKTLSWLLRGYIKGSHFDDAS--------ETIIKMLDLGLCPEYL 456

Query: 215  XXXAVLQGLRKRIQQSGNVETYLKLCRHLSDASLIGPCLVYMYLKRYKLWITKMI 51
               AVLQGLR RIQQ+GNVETYLKLC+HLSDA+LIGPCLVY+Y+K+YKLWI K I
Sbjct: 457  DRAAVLQGLRNRIQQTGNVETYLKLCKHLSDANLIGPCLVYLYIKKYKLWILKTI 511


>ref|XP_002313976.1| predicted protein [Populus trichocarpa] gi|222850384|gb|EEE87931.1|
            predicted protein [Populus trichocarpa]
          Length = 500

 Score =  655 bits (1690), Expect = 0.0
 Identities = 329/478 (68%), Positives = 383/478 (80%), Gaps = 3/478 (0%)
 Frame = -2

Query: 1475 CSRVSGTVCKLKTP---NSVVLNKDKVREFGFLKSVELDRFITSTDEDEMSEGFFEAIEE 1305
            C  VS  +C  +TP   N VV    KVREF   KSVELD+++TS DE+EM EGFFEAIEE
Sbjct: 31   CCMVSTIICNYQTPKRPNFVVAKTTKVREFRLFKSVELDQYVTSDDEEEMGEGFFEAIEE 90

Query: 1304 LESMTREPSDVLEEMNDRLSVRELQLVLVYFSQEGRDSWCALEVFDWLRKENRVDKETME 1125
            LE MTREPSD+LEEMNDRLS RELQLVLVYFSQEGRDSWCALEVF+WLRKENRVDKETME
Sbjct: 91   LERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLRKENRVDKETME 150

Query: 1124 LMVSLMCSWAGKLIEEKNEXXXXXXXXXXXXXXXLKPSFSMIEKVISLYFEMGKKDGAVL 945
            LMVS+MCSW  KLIE + +               LKPSFSMIEKVISLY++MGKK+GAV 
Sbjct: 151  LMVSIMCSWVKKLIEGEQDVGDVVDLLVDMDCVGLKPSFSMIEKVISLYWDMGKKEGAVS 210

Query: 944  FVKEILRRGITYSDDDGQGHKGGPTGYLAWKLMEEGNYKDAIKLVIEFKESGLKPEVYSY 765
            FVKE+LRRGI YS DDG+G KGGPTGYL WK+M +GNY++A+KLVI  +ESGLKPE+Y+Y
Sbjct: 211  FVKEVLRRGIAYSGDDGEGQKGGPTGYLTWKMMVDGNYRNAVKLVIHLRESGLKPEIYAY 270

Query: 764  LIAMTAVVKELNELAKALRKLKSFAKAGLITGLDRENVRLVEEYQSDLIADGVRLSDWVI 585
            LIAMTAVVKELNE +KALRKLK ++++G++T LD ENV LVE+YQSDL+ADGV LS WVI
Sbjct: 271  LIAMTAVVKELNEFSKALRKLKGYSRSGMVTELDAENVELVEKYQSDLLADGVCLSSWVI 330

Query: 584  QEGGPSLQGVVHERLLAMYICAGQGLEAERQLWEMKLEGKEADANLYDMVLAICASQKES 405
            QEG P+L GVVHERLLAMYICAG+GL+AERQLWEMKL GKEAD +LYD+VLAICASQKE+
Sbjct: 331  QEGSPALYGVVHERLLAMYICAGRGLDAERQLWEMKLVGKEADGDLYDIVLAICASQKEA 390

Query: 404  NAIARLLMRVEATSSLRKKKTLSWLLRGYIKGGHYSDAAXXXXXXXXXXXXXXXXXXXXX 225
            +A+ARLL R+E  SS+RKKK+LSWLLRGYIKGGHY +AA                     
Sbjct: 391  SAVARLLTRIEVASSMRKKKSLSWLLRGYIKGGHYGEAA--------ETLIKMLDLGLSP 442

Query: 224  XXXXXXAVLQGLRKRIQQSGNVETYLKLCRHLSDASLIGPCLVYMYLKRYKLWITKMI 51
                  AV+QGLRKRIQQ GNVE+YLKLC+ LSD +LIGP LVY+Y+K+YKLWI K++
Sbjct: 443  DYLDRVAVMQGLRKRIQQWGNVESYLKLCKRLSDVNLIGPSLVYLYIKKYKLWIMKLL 500


>ref|XP_002521193.1| conserved hypothetical protein [Ricinus communis]
            gi|223539607|gb|EEF41193.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 499

 Score =  642 bits (1657), Expect = 0.0
 Identities = 331/466 (71%), Positives = 377/466 (80%), Gaps = 2/466 (0%)
 Frame = -2

Query: 1442 KTPNSVVL--NKDKVREFGFLKSVELDRFITSTDEDEMSEGFFEAIEELESMTREPSDVL 1269
            K+ N VV   +K + REF  LKSVELD++I S DE+EMSEGFFEAIEELE MTREPSDVL
Sbjct: 42   KSSNFVVAQQSKSRNREFRVLKSVELDQYIASDDEEEMSEGFFEAIEELERMTREPSDVL 101

Query: 1268 EEMNDRLSVRELQLVLVYFSQEGRDSWCALEVFDWLRKENRVDKETMELMVSLMCSWAGK 1089
            EEMND+LS RELQLVLVYFSQEGRDSWCALEVF+WLRKENRVDKETMELMVS+MCSW  K
Sbjct: 102  EEMNDKLSARELQLVLVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWIKK 161

Query: 1088 LIEEKNEXXXXXXXXXXXXXXXLKPSFSMIEKVISLYFEMGKKDGAVLFVKEILRRGITY 909
            LIE ++E               LKPSFSMIEKVISLY+E+G+K+ +V FVKE+LRR + Y
Sbjct: 162  LIEGEHEIGDVVDLLVDMDCVGLKPSFSMIEKVISLYWEIGEKEKSVSFVKEVLRREVAY 221

Query: 908  SDDDGQGHKGGPTGYLAWKLMEEGNYKDAIKLVIEFKESGLKPEVYSYLIAMTAVVKELN 729
             +DDG+G KGGPTGYLAWK+M +GNY+DA+KLVI F+ESGLKPEVYSYLIAMTAVVKELN
Sbjct: 222  FEDDGEGQKGGPTGYLAWKMMVDGNYRDAVKLVIHFRESGLKPEVYSYLIAMTAVVKELN 281

Query: 728  ELAKALRKLKSFAKAGLITGLDRENVRLVEEYQSDLIADGVRLSDWVIQEGGPSLQGVVH 549
            E AKALRKLK FAK+GLI  LD EN RL+E+YQSDLIADGV LS WVIQEG PSL GVVH
Sbjct: 282  EFAKALRKLKGFAKSGLIAELDAENTRLIEKYQSDLIADGVCLSSWVIQEGSPSLYGVVH 341

Query: 548  ERLLAMYICAGQGLEAERQLWEMKLEGKEADANLYDMVLAICASQKESNAIARLLMRVEA 369
            ERLLAMYICAG+GL+AERQLWEMKL GK AD +LYD+VLAICASQKE++A++RLL RVE 
Sbjct: 342  ERLLAMYICAGRGLDAERQLWEMKLVGKHADGDLYDIVLAICASQKEASAVSRLLTRVEV 401

Query: 368  TSSLRKKKTLSWLLRGYIKGGHYSDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQGL 189
            TSSL+KKKTLSWLLRGY+KGG Y +AA                           AVLQGL
Sbjct: 402  TSSLQKKKTLSWLLRGYLKGGQYDEAA--------EALVKMLDMGLCPDYLDRVAVLQGL 453

Query: 188  RKRIQQSGNVETYLKLCRHLSDASLIGPCLVYMYLKRYKLWITKMI 51
            RKRIQQ GNVE+YL LC+ LSD +LIGP LVY+Y+K+YKLWI KM+
Sbjct: 454  RKRIQQWGNVESYLNLCKRLSDENLIGPSLVYLYIKKYKLWIMKML 499


>ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
            chloroplastic-like [Glycine max]
          Length = 508

 Score =  637 bits (1642), Expect = e-180
 Identities = 326/518 (62%), Positives = 393/518 (75%), Gaps = 8/518 (1%)
 Frame = -2

Query: 1580 MAFTYGIDYNSKLGFIDSLYFPQHR--------ILGARVSVNSCSRVSGTVCKLKTPNSV 1425
            MA  +G+    KLGF+ S   P  R              S+     +S   CK K P+ V
Sbjct: 1    MASAHGLAPIFKLGFVFSSVSPSQRKRHPLMFPASHCGFSLKFYGGLSARSCKFKNPSFV 60

Query: 1424 VLNKDKVREFGFLKSVELDRFITSTDEDEMSEGFFEAIEELESMTREPSDVLEEMNDRLS 1245
                  +R F  LKSVE+D+++TS DE  MS+GFFEAIEELE MTREPSDVLEEMNDRLS
Sbjct: 61   SAKHGSLRGFRALKSVEMDQYVTSNDE--MSDGFFEAIEELERMTREPSDVLEEMNDRLS 118

Query: 1244 VRELQLVLVYFSQEGRDSWCALEVFDWLRKENRVDKETMELMVSLMCSWAGKLIEEKNEX 1065
             RELQLVLVYFSQ+GRDSWCALEVFDWLRKENRVDKETMELMV++MC W  KLI++++  
Sbjct: 119  ARELQLVLVYFSQDGRDSWCALEVFDWLRKENRVDKETMELMVAIMCGWVKKLIQQQHGV 178

Query: 1064 XXXXXXXXXXXXXXLKPSFSMIEKVISLYFEMGKKDGAVLFVKEILRRGITYSDDDGQGH 885
                          L+P FSMIEKVISLY+EMG+K+GAVLFV+E+LRRGI Y ++D +GH
Sbjct: 179  GDVVDLLVDMDCVGLRPGFSMIEKVISLYWEMGEKEGAVLFVEEVLRRGIPYVEEDEEGH 238

Query: 884  KGGPTGYLAWKLMEEGNYKDAIKLVIEFKESGLKPEVYSYLIAMTAVVKELNELAKALRK 705
            KGGPTGYLAWK+M EG+Y++A++LVI F+ESGLKPE+YSYL+AMTAVVKELNE AKALRK
Sbjct: 239  KGGPTGYLAWKMMAEGDYRNAVRLVIRFRESGLKPEIYSYLVAMTAVVKELNEFAKALRK 298

Query: 704  LKSFAKAGLITGLDRENVRLVEEYQSDLIADGVRLSDWVIQEGGPSLQGVVHERLLAMYI 525
            LK F +AGL+  LD E+V L E+YQSD +ADGVRLS+WVIQ+G PSL G+VHERLLAMYI
Sbjct: 299  LKGFTRAGLVAELDLEDVELTEKYQSDTLADGVRLSNWVIQDGSPSLHGIVHERLLAMYI 358

Query: 524  CAGQGLEAERQLWEMKLEGKEADANLYDMVLAICASQKESNAIARLLMRVEATSSLRKKK 345
            CAG G+EAERQLWEMKL GKEAD +LYD+VLAICASQKESNA ARLL R+E  SS +KKK
Sbjct: 359  CAGHGIEAERQLWEMKLVGKEADGDLYDIVLAICASQKESNATARLLTRLEVVSSPQKKK 418

Query: 344  TLSWLLRGYIKGGHYSDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQGLRKRIQQSG 165
            +LSWLLRGYIKGGH+++AA                           AVLQGLRKRIQQ G
Sbjct: 419  SLSWLLRGYIKGGHFNEAA--------ETIMKMLELGFYPEYLDRAAVLQGLRKRIQQYG 470

Query: 164  NVETYLKLCRHLSDASLIGPCLVYMYLKRYKLWITKMI 51
            N++TY++LC+ LSDA+LIGPCLV++Y+++YKLW+ KM+
Sbjct: 471  NLDTYVRLCKSLSDANLIGPCLVHLYIRKYKLWVVKML 508


>ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
            chloroplastic-like [Glycine max]
          Length = 510

 Score =  634 bits (1635), Expect = e-179
 Identities = 328/520 (63%), Positives = 392/520 (75%), Gaps = 10/520 (1%)
 Frame = -2

Query: 1580 MAFTYGIDYNSKLGFIDSLYFPQHRILGARVSVNSCSR--------VSGTVCKLKTPNSV 1425
            MA+ +G     KLGF+ S   P  +        + C          +S   CK K P+ V
Sbjct: 1    MAYAHGFAPIFKLGFVFSSVSPSQKRHPLVFPASHCGYSLKFYDGVLSARSCKFKNPSFV 60

Query: 1424 VLNKDKVREFGFLKSVELDRFITSTDE-DEMSEGFFEAIEELESMTREPSDVLEEMNDRL 1248
               +  +R F  LKSVELD+++TS DE DEMS+GFFEAIEELE MTREPSDVLEEMNDRL
Sbjct: 61   --KQGSIRGFRALKSVELDQYVTSDDEEDEMSDGFFEAIEELERMTREPSDVLEEMNDRL 118

Query: 1247 SVRELQLVLVYFSQEGRDSWCALEVFDWLRKENRVDKETMELMVSLMCSWAGKLIEEKNE 1068
            S RELQLVLVYFSQ+GRDSWCALEVFDWLRKENRVDKETMELMV++MC W  KLI+E + 
Sbjct: 119  SARELQLVLVYFSQDGRDSWCALEVFDWLRKENRVDKETMELMVAIMCGWVKKLIQEHHG 178

Query: 1067 XXXXXXXXXXXXXXXL-KPSFSMIEKVISLYFEMGKKDGAVLFVKEILRRGITYSDDDGQ 891
                             +P FSMIEKVISLY+EMG+K+GAVLFV+E+LRRGI Y ++D +
Sbjct: 179  VVGDVVDLLVDMDCVGLRPGFSMIEKVISLYWEMGEKEGAVLFVEEVLRRGIPYLEEDEE 238

Query: 890  GHKGGPTGYLAWKLMEEGNYKDAIKLVIEFKESGLKPEVYSYLIAMTAVVKELNELAKAL 711
            GHKGGPTGYLAWK+M EG+Y  A++LVI F ESGLKPEVYSYL+AMTAVVKELNELAKAL
Sbjct: 239  GHKGGPTGYLAWKMMAEGDYTSAVRLVIHFTESGLKPEVYSYLVAMTAVVKELNELAKAL 298

Query: 710  RKLKSFAKAGLITGLDRENVRLVEEYQSDLIADGVRLSDWVIQEGGPSLQGVVHERLLAM 531
            RKLKSFA+ GL+  LD E+V L E+YQSDL+ DGVRLS+W IQ+G PSL G++HERLLAM
Sbjct: 299  RKLKSFARTGLVAELDLEDVELTEKYQSDLLGDGVRLSNWAIQDGSPSLHGIIHERLLAM 358

Query: 530  YICAGQGLEAERQLWEMKLEGKEADANLYDMVLAICASQKESNAIARLLMRVEATSSLRK 351
            YICAG G+EAE+QLWEMKL GKEAD +LYD+VLAICASQKESNA ARLL R+E  SS +K
Sbjct: 359  YICAGHGIEAEKQLWEMKLVGKEADGDLYDIVLAICASQKESNATARLLTRLEVASSPQK 418

Query: 350  KKTLSWLLRGYIKGGHYSDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLQGLRKRIQQ 171
            KK+LSWLLRGYIKGGH+++AA                           AVLQGLRKRIQQ
Sbjct: 419  KKSLSWLLRGYIKGGHFNEAA--------ETIMKMLDLGFYPEYLDRAAVLQGLRKRIQQ 470

Query: 170  SGNVETYLKLCRHLSDASLIGPCLVYMYLKRYKLWITKMI 51
             GN++TY++LC+ LSDA+LIGPCLV++Y+++YKLW+ KM+
Sbjct: 471  YGNLDTYVRLCKSLSDANLIGPCLVHLYIRKYKLWVVKML 510