BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001614
         (1483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]          597   e-168
ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum] ...   596   e-168
gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]              593   e-167
emb|CBI18223.3| unnamed protein product [Vitis vinifera]              593   e-167
ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vi...   593   e-167

>gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]
          Length = 389

 Score =  597 bits (1538), Expect = e-168
 Identities = 285/301 (94%), Positives = 296/301 (98%)
 Frame = -3

Query: 1427 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREVEKPG 1248
            KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREVEKPG
Sbjct: 5    KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREVEKPG 64

Query: 1247 SKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEDIKRRFYKNWCK 1068
            SKLHKKETCEAVTI+ETPPMVIVGVV YVKTPRGLR LNTVWAQHLSEDIKRRFYKNWCK
Sbjct: 65   SKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYKNWCK 124

Query: 1067 SKKKAFTKYSRKYESDEGKKDIQSQLEKMKKYAQVIRVLAHTQIRKMKGLKQKKAHLMEI 888
            SKKKAF KYS+KYE+DEGKKDIQ+QLEK+KKYA VIRVLAHTQIRKMKGLKQKKAHLMEI
Sbjct: 125  SKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAHLMEI 184

Query: 887  QVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 708
            QVNGG+IAQKVDFAYGFFEKQVP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 185  QVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244

Query: 707  THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTGQETHTAITEFDR 528
            THRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YKLGK GQE+HTA+TEFDR
Sbjct: 245  THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTAVTEFDR 304

Query: 527  T 525
            T
Sbjct: 305  T 305



 Score =  120 bits (300), Expect = 1e-24
 Identities = 59/62 (95%), Positives = 60/62 (96%)
 Frame = -1

Query: 397 IKGCCVGTKKRVVTLRQSLLTQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRL 218
           IKGCCVG KKRVVTLRQSLL QTSR+ALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRL
Sbjct: 328 IKGCCVGPKKRVVTLRQSLLNQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRL 387

Query: 217 KA 212
           KA
Sbjct: 388 KA 389


>ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum]
            gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum
            lycopersicum]
          Length = 389

 Score =  596 bits (1537), Expect = e-168
 Identities = 285/301 (94%), Positives = 296/301 (98%)
 Frame = -3

Query: 1427 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREVEKPG 1248
            KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREVEKPG
Sbjct: 5    KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREVEKPG 64

Query: 1247 SKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEDIKRRFYKNWCK 1068
            SKLHKKETCEAVTI+ETPPMVIVGVV YVKTPRGLR LNTVWAQHLSEDIKRRFYKNWCK
Sbjct: 65   SKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYKNWCK 124

Query: 1067 SKKKAFTKYSRKYESDEGKKDIQSQLEKMKKYAQVIRVLAHTQIRKMKGLKQKKAHLMEI 888
            SKKKAF KYS+KYE+DEGKKDIQ+QLEK+KKYA VIRVLAHTQIRKMKGLKQKKAHLMEI
Sbjct: 125  SKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAHLMEI 184

Query: 887  QVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 708
            QVNGG+IAQKVDFAYGFFEKQVP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 185  QVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244

Query: 707  THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTGQETHTAITEFDR 528
            THRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YKLGK GQE+HTA+TEFDR
Sbjct: 245  THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTALTEFDR 304

Query: 527  T 525
            T
Sbjct: 305  T 305



 Score =  122 bits (306), Expect = 2e-25
 Identities = 60/62 (96%), Positives = 61/62 (98%)
 Frame = -1

Query: 397 IKGCCVGTKKRVVTLRQSLLTQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRL 218
           IKGCCVGTKKRVVTLRQSLL QTSR+ALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRL
Sbjct: 328 IKGCCVGTKKRVVTLRQSLLNQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRL 387

Query: 217 KA 212
           KA
Sbjct: 388 KA 389


>gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]
          Length = 389

 Score =  593 bits (1530), Expect = e-167
 Identities = 283/301 (94%), Positives = 295/301 (98%)
 Frame = -3

Query: 1427 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREVEKPG 1248
            KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPCKLTAFLGYKAGMTHIVR+VEKPG
Sbjct: 5    KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDVEKPG 64

Query: 1247 SKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEDIKRRFYKNWCK 1068
            SKLHKKETCEAVTIIETPPMVIVGVV YVKTPRGLR LNTVWAQHLSE++KRRFYKNWCK
Sbjct: 65   SKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYKNWCK 124

Query: 1067 SKKKAFTKYSRKYESDEGKKDIQSQLEKMKKYAQVIRVLAHTQIRKMKGLKQKKAHLMEI 888
            SKKKAF KYS+KYESDEGKKDIQ+QLEK+KKYA VIRVLAHTQIRKMKGLKQKKAHLMEI
Sbjct: 125  SKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAHLMEI 184

Query: 887  QVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 708
            QVNGGTIAQKVDFAYGFFEKQVP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 185  QVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244

Query: 707  THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTGQETHTAITEFDR 528
            THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKK+YKLGK GQE+H A+T+FDR
Sbjct: 245  THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKLGKAGQESHAAVTDFDR 304

Query: 527  T 525
            T
Sbjct: 305  T 305



 Score =  118 bits (296), Expect = 3e-24
 Identities = 58/61 (95%), Positives = 59/61 (96%)
 Frame = -1

Query: 397 IKGCCVGTKKRVVTLRQSLLTQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRL 218
           IKGCCVG KKRVVTLRQSLL QTSR+ALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRL
Sbjct: 328 IKGCCVGPKKRVVTLRQSLLNQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRL 387

Query: 217 K 215
           K
Sbjct: 388 K 388


>emb|CBI18223.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  593 bits (1528), Expect = e-167
 Identities = 282/301 (93%), Positives = 297/301 (98%)
 Frame = -3

Query: 1427 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREVEKPG 1248
            KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPC+LTAFLGYKAGMTHIVREVEKPG
Sbjct: 65   KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREVEKPG 124

Query: 1247 SKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEDIKRRFYKNWCK 1068
            SKLHKKETCEAVTI+ETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSE++KRRFYKNWCK
Sbjct: 125  SKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYKNWCK 184

Query: 1067 SKKKAFTKYSRKYESDEGKKDIQSQLEKMKKYAQVIRVLAHTQIRKMKGLKQKKAHLMEI 888
            SKKKAFTKYS++YE++EGKK IQ+QLEKMKKYA VIRVLAHTQIRKMKGLKQKKAHLMEI
Sbjct: 185  SKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAHLMEI 244

Query: 887  QVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 708
            QVNGGTIAQKVD+AYGFFEKQVP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 245  QVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 304

Query: 707  THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTGQETHTAITEFDR 528
            THRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYKLGK  QE+HTA+TEFDR
Sbjct: 305  THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALTEFDR 364

Query: 527  T 525
            T
Sbjct: 365  T 365



 Score =  119 bits (297), Expect = 3e-24
 Identities = 58/62 (93%), Positives = 60/62 (96%)
 Frame = -1

Query: 397 IKGCCVGTKKRVVTLRQSLLTQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRL 218
           IKGCCVG KKRVVTLRQSLL QTSR+ALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGR+
Sbjct: 388 IKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRM 447

Query: 217 KA 212
           KA
Sbjct: 448 KA 449


>ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vitis vinifera]
          Length = 397

 Score =  593 bits (1528), Expect = e-167
 Identities = 282/301 (93%), Positives = 297/301 (98%)
 Frame = -3

Query: 1427 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREVEKPG 1248
            KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPC+LTAFLGYKAGMTHIVREVEKPG
Sbjct: 13   KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREVEKPG 72

Query: 1247 SKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEDIKRRFYKNWCK 1068
            SKLHKKETCEAVTI+ETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSE++KRRFYKNWCK
Sbjct: 73   SKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYKNWCK 132

Query: 1067 SKKKAFTKYSRKYESDEGKKDIQSQLEKMKKYAQVIRVLAHTQIRKMKGLKQKKAHLMEI 888
            SKKKAFTKYS++YE++EGKK IQ+QLEKMKKYA VIRVLAHTQIRKMKGLKQKKAHLMEI
Sbjct: 133  SKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAHLMEI 192

Query: 887  QVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 708
            QVNGGTIAQKVD+AYGFFEKQVP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 193  QVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 252

Query: 707  THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTGQETHTAITEFDR 528
            THRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYKLGK  QE+HTA+TEFDR
Sbjct: 253  THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALTEFDR 312

Query: 527  T 525
            T
Sbjct: 313  T 313



 Score =  119 bits (297), Expect = 3e-24
 Identities = 58/62 (93%), Positives = 60/62 (96%)
 Frame = -1

Query: 397 IKGCCVGTKKRVVTLRQSLLTQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRL 218
           IKGCCVG KKRVVTLRQSLL QTSR+ALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGR+
Sbjct: 336 IKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRM 395

Query: 217 KA 212
           KA
Sbjct: 396 KA 397