BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001608
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35252.1| unknown [Medicago truncatula]                          189   7e-46
ref|XP_002526538.1| Photosystem II reaction center W protein, pu...   188   1e-45
ref|XP_004157580.1| PREDICTED: photosystem II reaction center PS...   187   3e-45
ref|XP_004140578.1| PREDICTED: photosystem II reaction center PS...   187   3e-45
ref|XP_002303109.1| predicted protein [Populus trichocarpa] gi|2...   185   1e-44

>gb|AFK35252.1| unknown [Medicago truncatula]
          Length = 182

 Score =  189 bits (480), Expect = 7e-46
 Identities = 88/100 (88%), Positives = 97/100 (97%)
 Frame = +1

Query: 397 EQTVPDVKLTKSRDGTNGMAIFRFDEPSVFDSSGEVGEITGFYMIDEEGTLQSVDVNARF 576
           E T+PDVKLTKS+DGTNGMAIFRFD+PSVFDSSGEVG+ITGFYMIDEEG LQSVDVNA+F
Sbjct: 82  ELTIPDVKLTKSKDGTNGMAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKF 141

Query: 577 VNGKPAGIEAKYIMRTPRDWDRFMRFMERYANANSLQFVK 696
           VNGKP+GIEAKYIMRTPRDWDRFMRFMERY++AN LQF+K
Sbjct: 142 VNGKPSGIEAKYIMRTPRDWDRFMRFMERYSDANGLQFIK 181


>ref|XP_002526538.1| Photosystem II reaction center W protein, putative [Ricinus
           communis] gi|223534099|gb|EEF35816.1| Photosystem II
           reaction center W protein, putative [Ricinus communis]
          Length = 178

 Score =  188 bits (477), Expect = 1e-45
 Identities = 104/178 (58%), Positives = 113/178 (63%), Gaps = 10/178 (5%)
 Frame = +1

Query: 196 MATLHSLAFPSHVSQCSHQTPSVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 375
           MATL SLAF S VS  SHQT S  G                                   
Sbjct: 1   MATLQSLAFASPVSHYSHQTRSFPGSFCWAVHRIARSPFSGKSLRLSHPQLTSTRQKSSR 60

Query: 376 XXXXXXX----------EQTVPDVKLTKSRDGTNGMAIFRFDEPSVFDSSGEVGEITGFY 525
                            EQT+PDV+LTKSRDGTNGMAIF FDEPSVFDSS E+G+ITGFY
Sbjct: 61  FITMMAKPSIQFIQGTDEQTIPDVRLTKSRDGTNGMAIFTFDEPSVFDSSAELGDITGFY 120

Query: 526 MIDEEGTLQSVDVNARFVNGKPAGIEAKYIMRTPRDWDRFMRFMERYANANSLQFVKS 699
           MIDEEG LQSVDV+A+FVNGKPA IEAKY+MR+PR+WDRFMRFMERYANAN LQFVKS
Sbjct: 121 MIDEEGVLQSVDVSAKFVNGKPARIEAKYVMRSPREWDRFMRFMERYANANGLQFVKS 178


>ref|XP_004157580.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Cucumis sativus]
          Length = 226

 Score =  187 bits (475), Expect = 3e-45
 Identities = 85/100 (85%), Positives = 97/100 (97%)
 Frame = +1

Query: 397 EQTVPDVKLTKSRDGTNGMAIFRFDEPSVFDSSGEVGEITGFYMIDEEGTLQSVDVNARF 576
           EQT+PDV+LTKSRDGTNGMAIFRF++PSVFDSS EVG+ITGFYMIDEEG +QSVDVNA+F
Sbjct: 126 EQTIPDVRLTKSRDGTNGMAIFRFEQPSVFDSSAEVGDITGFYMIDEEGMIQSVDVNAKF 185

Query: 577 VNGKPAGIEAKYIMRTPRDWDRFMRFMERYANANSLQFVK 696
           +NGKPAGIEAKY+MRTPR+WDRFMRFMERY+NAN +QFVK
Sbjct: 186 INGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGMQFVK 225


>ref|XP_004140578.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Cucumis sativus]
          Length = 221

 Score =  187 bits (475), Expect = 3e-45
 Identities = 85/100 (85%), Positives = 97/100 (97%)
 Frame = +1

Query: 397 EQTVPDVKLTKSRDGTNGMAIFRFDEPSVFDSSGEVGEITGFYMIDEEGTLQSVDVNARF 576
           EQT+PDV+LTKSRDGTNGMAIFRF++PSVFDSS EVG+ITGFYMIDEEG +QSVDVNA+F
Sbjct: 121 EQTIPDVRLTKSRDGTNGMAIFRFEQPSVFDSSAEVGDITGFYMIDEEGMIQSVDVNAKF 180

Query: 577 VNGKPAGIEAKYIMRTPRDWDRFMRFMERYANANSLQFVK 696
           +NGKPAGIEAKY+MRTPR+WDRFMRFMERY+NAN +QFVK
Sbjct: 181 INGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGMQFVK 220


>ref|XP_002303109.1| predicted protein [Populus trichocarpa] gi|222844835|gb|EEE82382.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  185 bits (470), Expect = 1e-44
 Identities = 89/100 (89%), Positives = 94/100 (94%)
 Frame = +1

Query: 397 EQTVPDVKLTKSRDGTNGMAIFRFDEPSVFDSSGEVGEITGFYMIDEEGTLQSVDVNARF 576
           EQTVPDV+LTKSRDGTNGMAIF FD+PSVFDSS EVG+ITGFYMIDEEG LQSVDVNA+F
Sbjct: 15  EQTVPDVRLTKSRDGTNGMAIFTFDQPSVFDSSAEVGDITGFYMIDEEGILQSVDVNAKF 74

Query: 577 VNGKPAGIEAKYIMRTPRDWDRFMRFMERYANANSLQFVK 696
           VNGKP  IEAKYIMRTPR+WDRFMRFMERYANAN LQFVK
Sbjct: 75  VNGKPERIEAKYIMRTPREWDRFMRFMERYANANGLQFVK 114