BLASTX nr result

ID: Bupleurum21_contig00001597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001597
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526275.1| eukaryotic translation initiation factor 2c,...   340   3e-91
ref|XP_002318338.1| argonaute protein group [Populus trichocarpa...   339   5e-91
dbj|BAG12806.1| argonaute1 [Daucus carota]                            335   9e-90
gb|ABC61502.1| AGO1-1, partial [Nicotiana benthamiana]                335   1e-89
gb|AFV15377.1| AGO1A [Solanum lycopersicum] gi|409893066|gb|AFV4...   335   1e-89

>ref|XP_002526275.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223534406|gb|EEF36112.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 1063

 Score =  340 bits (872), Expect = 3e-91
 Identities = 175/248 (70%), Positives = 193/248 (77%)
 Frame = -2

Query: 745 VPNLHQAPLPQHQAGEMSQPIPSVTIGGLXXXXXXXXXXXXXXXXXXSQVTQQFQQLAVS 566
           VP LHQA L  +QAG   Q +PS                          V QQ Q+L++ 
Sbjct: 121 VPELHQATLAPYQAGVSPQLMPS-----------EGSSSSGPPEPSPVVVAQQMQELSIQ 169

Query: 565 QGGSSDDTVQPNPASSKSIKFPLRPGKGSIGSRCVVKANHFFAELPDKDLHQYDVSITPE 386
           Q  SS   +Q  P SSKS++FPLRPGKGS G RC+VKANHFFAELPDKDLHQYDV+ITPE
Sbjct: 170 QEVSSSQPIQAPPPSSKSMRFPLRPGKGSTGIRCIVKANHFFAELPDKDLHQYDVTITPE 229

Query: 385 VTSRGVNRAVMKQLVDLYRDSHLGKRLPAYDGRKSLYTAGPLPFVTKEFKIILTDEDDGS 206
           VTSRGVNRAVM+QLV LYR+SHLGKRLPAYDGRKSLYTAGPLPF++KEFKI L DEDDGS
Sbjct: 230 VTSRGVNRAVMEQLVKLYRESHLGKRLPAYDGRKSLYTAGPLPFISKEFKITLIDEDDGS 289

Query: 205 GNARREREFKVVIKLASRADLHHLDMFLKGRQADAPQEALQVLDIVLRELPTARYSPVGR 26
           G  RREREF+VVIKLA+RADLHHL +FL+GRQADAPQEALQVLDIVLRELPT RY PVGR
Sbjct: 290 GGQRREREFRVVIKLAARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTTRYCPVGR 349

Query: 25  SFYSPDLG 2
           SFYSPDLG
Sbjct: 350 SFYSPDLG 357


>ref|XP_002318338.1| argonaute protein group [Populus trichocarpa]
           gi|222859011|gb|EEE96558.1| argonaute protein group
           [Populus trichocarpa]
          Length = 1062

 Score =  339 bits (870), Expect = 5e-91
 Identities = 174/247 (70%), Positives = 192/247 (77%)
 Frame = -2

Query: 742 PNLHQAPLPQHQAGEMSQPIPSVTIGGLXXXXXXXXXXXXXXXXXXSQVTQQFQQLAVSQ 563
           P LHQA    + A   +QP PS     +                    V+QQ QQL+V Q
Sbjct: 122 PELHQATPAPYPAVVTTQPTPSEASSSMRPPEPSLAT-----------VSQQLQQLSVEQ 170

Query: 562 GGSSDDTVQPNPASSKSIKFPLRPGKGSIGSRCVVKANHFFAELPDKDLHQYDVSITPEV 383
            GSS   +QP PASSKS++FPLRPGKGS G RC+VKANHFFAELPDKDLHQYDV+ITPEV
Sbjct: 171 EGSSSQAIQPLPASSKSVRFPLRPGKGSTGIRCIVKANHFFAELPDKDLHQYDVTITPEV 230

Query: 382 TSRGVNRAVMKQLVDLYRDSHLGKRLPAYDGRKSLYTAGPLPFVTKEFKIILTDEDDGSG 203
           TSRGVNRAVM+QLV LYR+SHLGKRLPAYDGRKSLYTAG LPF  K+FKI L D+DDGSG
Sbjct: 231 TSRGVNRAVMEQLVKLYRESHLGKRLPAYDGRKSLYTAGALPFQAKDFKITLIDDDDGSG 290

Query: 202 NARREREFKVVIKLASRADLHHLDMFLKGRQADAPQEALQVLDIVLRELPTARYSPVGRS 23
             RREREFKV IKLA+RADLHHL +FL+G+QADAPQEALQVLDIVLRELPTARY PVGRS
Sbjct: 291 GPRREREFKVTIKLAARADLHHLGLFLRGQQADAPQEALQVLDIVLRELPTARYCPVGRS 350

Query: 22  FYSPDLG 2
           FYSPDLG
Sbjct: 351 FYSPDLG 357


>dbj|BAG12806.1| argonaute1 [Daucus carota]
          Length = 1107

 Score =  335 bits (859), Expect = 9e-90
 Identities = 180/309 (58%), Positives = 211/309 (68%), Gaps = 6/309 (1%)
 Frame = -2

Query: 910  YGGPSEYNQMQSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGV------ 749
            YGGPSEYNQMQ RG                                              
Sbjct: 104  YGGPSEYNQMQGRGAQQQPQYQQQQQQHHQHYPQGRGTPPQRRGGGQGGFVPSTGGPSRP 163

Query: 748  LVPNLHQAPLPQHQAGEMSQPIPSVTIGGLXXXXXXXXXXXXXXXXXXSQVTQQFQQLAV 569
              P+LHQA    HQAG ++QP+P  T                       QVTQQFQ+L+V
Sbjct: 164  SGPDLHQAVQAPHQAGMLTQPMPYATS---TVTESEASSSSSVPEPTPLQVTQQFQELSV 220

Query: 568  SQGGSSDDTVQPNPASSKSIKFPLRPGKGSIGSRCVVKANHFFAELPDKDLHQYDVSITP 389
             Q GSS + V P PASSK++ FPLRPG+G+ G+RC+VKANHFFAELP+KDLH YDVSITP
Sbjct: 221  QQEGSSSEIVGP-PASSKALTFPLRPGRGTTGNRCIVKANHFFAELPNKDLHHYDVSITP 279

Query: 388  EVTSRGVNRAVMKQLVDLYRDSHLGKRLPAYDGRKSLYTAGPLPFVTKEFKIILTDEDDG 209
            EVTSRGVNRAV+K+LV LY+ S L  RLPAYDGRKSLYTAGPLPFV+KEFKI LTD+DDG
Sbjct: 280  EVTSRGVNRAVIKELVRLYQASLLDNRLPAYDGRKSLYTAGPLPFVSKEFKITLTDDDDG 339

Query: 208  SGNARREREFKVVIKLASRADLHHLDMFLKGRQADAPQEALQVLDIVLRELPTARYSPVG 29
            +G+ARR+R+FK+VIKLASRA+LHHLDMFLKG+Q D+PQEALQVLDIVLRE+PT+R+ PVG
Sbjct: 340  TGSARRQRDFKIVIKLASRANLHHLDMFLKGKQTDSPQEALQVLDIVLREMPTSRFCPVG 399

Query: 28   RSFYSPDLG 2
            RSFY P +G
Sbjct: 400  RSFYDPAIG 408


>gb|ABC61502.1| AGO1-1, partial [Nicotiana benthamiana]
          Length = 1052

 Score =  335 bits (858), Expect = 1e-89
 Identities = 175/248 (70%), Positives = 191/248 (77%)
 Frame = -2

Query: 745 VPNLHQAPLPQHQAGEMSQPIPSVTIGGLXXXXXXXXXXXXXXXXXXSQVTQQFQQLAVS 566
           VP LHQA    HQ     +P  + +  G                    QVTQQFQQL V 
Sbjct: 111 VPELHQATQTPHQPVPYGRPSETYSEAG---------SSSQPPEPTTQQVTQQFQQLVVQ 161

Query: 565 QGGSSDDTVQPNPASSKSIKFPLRPGKGSIGSRCVVKANHFFAELPDKDLHQYDVSITPE 386
              ++   +QP  ASSKS++FPLRPGKGS G RC+VKANHFFAELPDKDLHQYDVSITPE
Sbjct: 162 PEAAATQAIQP--ASSKSMRFPLRPGKGSTGIRCIVKANHFFAELPDKDLHQYDVSITPE 219

Query: 385 VTSRGVNRAVMKQLVDLYRDSHLGKRLPAYDGRKSLYTAGPLPFVTKEFKIILTDEDDGS 206
           V SRGVNRAVM+QLV LYR+SHLGKRLPAYDGRKSLYTAGPLPFV K+FKI L D+DDG 
Sbjct: 220 VASRGVNRAVMEQLVKLYRESHLGKRLPAYDGRKSLYTAGPLPFVQKDFKITLIDDDDGP 279

Query: 205 GNARREREFKVVIKLASRADLHHLDMFLKGRQADAPQEALQVLDIVLRELPTARYSPVGR 26
           G ARREREFKVVIKLA+RADLHHL MFL+GRQADAPQEALQVLDIVLRELPT+RY PVGR
Sbjct: 280 GGARREREFKVVIKLAARADLHHLGMFLQGRQADAPQEALQVLDIVLRELPTSRYCPVGR 339

Query: 25  SFYSPDLG 2
           SFYSP LG
Sbjct: 340 SFYSPHLG 347


>gb|AFV15377.1| AGO1A [Solanum lycopersicum] gi|409893066|gb|AFV46190.1|
           argonaute1-1, partial [Solanum lycopersicum]
          Length = 1054

 Score =  335 bits (858), Expect = 1e-89
 Identities = 174/248 (70%), Positives = 191/248 (77%)
 Frame = -2

Query: 745 VPNLHQAPLPQHQAGEMSQPIPSVTIGGLXXXXXXXXXXXXXXXXXXSQVTQQFQQLAVS 566
           VP LHQA    HQ     +P  + +  G                    QVTQQFQQ+AV 
Sbjct: 113 VPELHQATETPHQPVPYGRPAETYSEAG---------SSSQPPEPMTHQVTQQFQQIAVQ 163

Query: 565 QGGSSDDTVQPNPASSKSIKFPLRPGKGSIGSRCVVKANHFFAELPDKDLHQYDVSITPE 386
               +   + P   SSKS++FPLRPGKGS G+RC+VKANHFFAELPDKDLHQYDVSITPE
Sbjct: 164 PEAGASQAIPP--VSSKSMRFPLRPGKGSNGTRCIVKANHFFAELPDKDLHQYDVSITPE 221

Query: 385 VTSRGVNRAVMKQLVDLYRDSHLGKRLPAYDGRKSLYTAGPLPFVTKEFKIILTDEDDGS 206
           V SRGVNRAVM+QLV LYR+SHLGKRLPAYDGRKSLYTAGPLPFV K+FKI L D+DDG 
Sbjct: 222 VASRGVNRAVMEQLVKLYRESHLGKRLPAYDGRKSLYTAGPLPFVQKDFKITLLDDDDGP 281

Query: 205 GNARREREFKVVIKLASRADLHHLDMFLKGRQADAPQEALQVLDIVLRELPTARYSPVGR 26
           G ARREREFKVVIKLA+RADLHHL MFL+GRQADAPQEALQVLDIVLRELPT+RY PVGR
Sbjct: 282 GGARREREFKVVIKLAARADLHHLGMFLQGRQADAPQEALQVLDIVLRELPTSRYCPVGR 341

Query: 25  SFYSPDLG 2
           SFYSPDLG
Sbjct: 342 SFYSPDLG 349


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