BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001594
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    58   7e-07

>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/94 (37%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
 Frame = +3

Query: 6   TRSRLVSYGLMDDVVCGLCCQFDETEQHLFFNCSYSAHI----IACCSFDIPKDLHSICA 173
           TR RL  +GL    VC LC   DET  HLFF C +S  I    +       P     I  
Sbjct: 181 TRDRLTQWGLNIPTVCVLCNVVDETHDHLFFQCQFSNEIWSFFMIRAGMTPPHLFGPILL 240

Query: 174 FADSLPRLSFKLLYVKVFTVAAVYYIWQKRNCRI 275
           +  S        L +K+   A+VY IW++RNCRI
Sbjct: 241 WLKSASSSKNLSLIIKLLFQASVYLIWRERNCRI 274