BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001571
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513761.1| Photosystem II 22 kDa protein, chloroplast p...   283   6e-74
gb|ACD56611.1| putative photosystem II protein [Gossypioides kir...   283   6e-74
gb|AFK43146.1| unknown [Lotus japonicus]                              280   4e-73
ref|XP_002285857.1| PREDICTED: photosystem II 22 kDa protein, ch...   280   4e-73
gb|ABO41835.1| putative photosystem II protein [Gossypium raimon...   276   6e-72

>ref|XP_002513761.1| Photosystem II 22 kDa protein, chloroplast precursor, putative
            [Ricinus communis] gi|223546847|gb|EEF48344.1|
            Photosystem II 22 kDa protein, chloroplast precursor,
            putative [Ricinus communis]
          Length = 275

 Score =  283 bits (724), Expect = 6e-74
 Identities = 165/268 (61%), Positives = 179/268 (66%), Gaps = 2/268 (0%)
 Frame = -2

Query: 1087 MAQTMLLMSSSTCVSSHAVDNLKSPALPL-LQRLKPKSFSQTLLPSLFNVXXXXXXXSTF 911
            MAQTML MS  +  + H VD  + P L   + RL+PK FS  L   L           TF
Sbjct: 1    MAQTMLFMSGVS--TRHVVDLKRDPLLQFQVDRLRPKPFSSLLFSPLPTNSSSFAPSKTF 58

Query: 910  TTYALFKSXXXXXXXXXXXXXXXV-EDXXXXXXXXXXXTKANELFVGRVAMIGFAASLLG 734
            TT+ALFKS                 ED           TK NELFVGRVAM+GFAASLLG
Sbjct: 59   TTFALFKSKAKAAPKKTVVKPKQKVEDGVFGTSGGIGFTKQNELFVGRVAMLGFAASLLG 118

Query: 733  EAITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGKFIDDPPTGLEKAV 554
            E +TGKGILAQLNLETGIPIYEAEP          LGAIGALGDRGKF+DDPPTG+E AV
Sbjct: 119  EGLTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGIEGAV 178

Query: 553  ISPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIET 374
            I PGKGFR+ALGL EGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIET
Sbjct: 179  IPPGKGFRAALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIET 238

Query: 373  GIPISDIEPXXXXXXXXXXXXXXNPGTG 290
            GIP+++IEP              NPGTG
Sbjct: 239  GIPVNEIEPLVLFNVIFFFFAALNPGTG 266


>gb|ACD56611.1| putative photosystem II protein [Gossypioides kirkii]
          Length = 277

 Score =  283 bits (724), Expect = 6e-74
 Identities = 173/271 (63%), Positives = 183/271 (67%), Gaps = 5/271 (1%)
 Frame = -2

Query: 1087 MAQTMLLMSSSTCVSSHAVDNLKSPALPLL----QRLKPKSFSQTLLPSLFNVXXXXXXX 920
            MAQTML+MSS++  +SH V NLK    PLL    Q LKPK FS  L   L N        
Sbjct: 1    MAQTMLVMSSTSVSASHVV-NLKRDH-PLLHFQAQGLKPKPFSHFLFNPLSNAVAASSSK 58

Query: 919  STFTTYALFKSXXXXXXXXXXXXXXXV-EDXXXXXXXXXXXTKANELFVGRVAMIGFAAS 743
              FTT+ALFKS                 ED           TK NELFVGRVAMIGFAAS
Sbjct: 59   -AFTTFALFKSKTKAAPKKAEPKPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAAS 117

Query: 742  LLGEAITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGKFIDDPPTGLE 563
            LLGEAITGKGILAQLNLETGIPIYEAEP          LGAIGALGDRG+F+D+PPTG+E
Sbjct: 118  LLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEPPTGVE 177

Query: 562  KAVISPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLN 383
             AVI PGKG R ALGL EGGPLFGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLN
Sbjct: 178  GAVIPPGKGVRGALGLKEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 237

Query: 382  IETGIPISDIEPXXXXXXXXXXXXXXNPGTG 290
            IETGIPISDIEP              NPGTG
Sbjct: 238  IETGIPISDIEPLVLFNVAFFFAAAINPGTG 268


>gb|AFK43146.1| unknown [Lotus japonicus]
          Length = 273

 Score =  280 bits (717), Expect = 4e-73
 Identities = 176/271 (64%), Positives = 187/271 (69%), Gaps = 5/271 (1%)
 Frame = -2

Query: 1087 MAQTMLLMSSSTCVSSHAVDNLKSPALPLL-QRLKPKSFSQTL---LPSLFNVXXXXXXX 920
            MAQTMLLMSS +  SS++VD  K P L L  QRL+PK FSQ     LPS  ++       
Sbjct: 1    MAQTMLLMSSVS--SSYSVDLKKDPLLHLQSQRLRPK-FSQLSFNPLPSNSSLFSSR--- 54

Query: 919  STFTTYALFKSXXXXXXXXXXXXXXXVEDXXXXXXXXXXXTKANELFVGRVAMIGFAASL 740
             TFTT ALFKS               VED           TK NELFVGRVAMIGFAASL
Sbjct: 55   -TFTTLALFKSKAKAPPPKVVKQKPKVEDGVFGTSGGIGFTKQNELFVGRVAMIGFAASL 113

Query: 739  LGEAITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGKFIDDP-PTGLE 563
            LGEA+TGKGILAQLNLETGIPIYEAEP          LGAIGALGDRGKF+DD  PTGL+
Sbjct: 114  LGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDESPTGLD 173

Query: 562  KAVISPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLN 383
            KAVI PGKG R ALGLSEGGPLFGFTKSNELFVGRLAQLG AFSLIGEIITGKGALAQLN
Sbjct: 174  KAVIPPGKGLRGALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLN 233

Query: 382  IETGIPISDIEPXXXXXXXXXXXXXXNPGTG 290
            IETGIPI++IEP              NPGTG
Sbjct: 234  IETGIPINEIEPLVLFNVAFFFIAALNPGTG 264


>ref|XP_002285857.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic [Vitis
            vinifera] gi|302141814|emb|CBI19017.3| unnamed protein
            product [Vitis vinifera]
          Length = 270

 Score =  280 bits (717), Expect = 4e-73
 Identities = 170/268 (63%), Positives = 181/268 (67%), Gaps = 2/268 (0%)
 Frame = -2

Query: 1087 MAQTMLLMSSSTCVSSHAVDNLKSPALPLLQRLKPKSFSQTLLPSLFNVXXXXXXXSTFT 908
            MAQTML+  S   VS H+V +LK    PLLQRL+PK FS  LLP L            FT
Sbjct: 1    MAQTMLITPS---VSGHSVLDLKRQ--PLLQRLRPKPFSHLLLPPL--PTSSSTSSPAFT 53

Query: 907  TYALFKSXXXXXXXXXXXXXXXV-EDXXXXXXXXXXXTKANELFVGRVAMIGFAASLLGE 731
            T ALFKS                 ED           TK NELFVGRVAM+GFAASLLGE
Sbjct: 54   TLALFKSKTKAAPSKKVTKPKPQVEDGIFGTSGGIGFTKKNELFVGRVAMLGFAASLLGE 113

Query: 730  AITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGKFIDD-PPTGLEKAV 554
            AITGKGILAQLNLETGIPIYEAEP          LGAIGALGDRG+F+DD PPTG+E AV
Sbjct: 114  AITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDDPPTGIEGAV 173

Query: 553  ISPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIET 374
            I PGKG RSALGL EGGPLFGFTKSNELFVGRLAQLGI FS+IGEIITGKGALAQLNIET
Sbjct: 174  IPPGKGLRSALGLREGGPLFGFTKSNELFVGRLAQLGIVFSIIGEIITGKGALAQLNIET 233

Query: 373  GIPISDIEPXXXXXXXXXXXXXXNPGTG 290
            G+PISDIEP              NPG+G
Sbjct: 234  GVPISDIEPLVLFNVIFFFFAALNPGSG 261


>gb|ABO41835.1| putative photosystem II protein [Gossypium raimondii]
          Length = 278

 Score =  276 bits (707), Expect = 6e-72
 Identities = 170/270 (62%), Positives = 179/270 (66%), Gaps = 4/270 (1%)
 Frame = -2

Query: 1087 MAQTMLLMSSSTCVSSHAVDNLKSPALPL---LQRLKPKSFSQTLLPSLFNVXXXXXXXS 917
            MAQTML+MSS++  +SH V NLK     L    Q LKPK  S  L     N         
Sbjct: 1    MAQTMLVMSSTSVSTSHVV-NLKRDHTLLHFQAQGLKPKPSSHFLFNPHSNTVAASSSK- 58

Query: 916  TFTTYALFK-SXXXXXXXXXXXXXXXVEDXXXXXXXXXXXTKANELFVGRVAMIGFAASL 740
             FTT+ALFK                 VED           TK NELFVGRVAMIGFAASL
Sbjct: 59   AFTTFALFKPKTKAAPKKAAPKPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 118

Query: 739  LGEAITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXLGAIGALGDRGKFIDDPPTGLEK 560
            LGEAITGKGILAQLNLETGIPIYEAEP          LGAIGALGDRGKF+D+PPTG+E 
Sbjct: 119  LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPPTGIEG 178

Query: 559  AVISPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNI 380
            AVI PGKG R ALGL EGGPLFGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLNI
Sbjct: 179  AVIPPGKGIRGALGLKEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNI 238

Query: 379  ETGIPISDIEPXXXXXXXXXXXXXXNPGTG 290
            ETGIPISDIEP              NPGTG
Sbjct: 239  ETGIPISDIEPLVLFNVAFFFFAAINPGTG 268