BLASTX nr result
ID: Bupleurum21_contig00001568
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00001568 (267 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK44580.1| unknown [Lotus japonicus] 73 2e-11 gb|AFK36672.1| unknown [Lotus japonicus] gi|388497476|gb|AFK3680... 73 2e-11 emb|CAJ34813.1| plastocyanine [Plantago major] 73 3e-11 prf||0512262B plastocyanin 71 1e-10 gb|ACV32157.1| chloroplast plastocyanin precursor [Nicotiana ben... 70 2e-10 >gb|AFK44580.1| unknown [Lotus japonicus] Length = 167 Score = 73.2 bits (178), Expect = 2e-11 Identities = 47/86 (54%), Positives = 51/86 (59%), Gaps = 4/86 (4%) Frame = +3 Query: 21 TAKVSSAPM----LSIKASSLKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDGGLAF 188 +AKVSS+P LS+KAS LKD GSDDGGLAF Sbjct: 27 SAKVSSSPSQMPRLSVKAS-LKD---FGVAVVATAASAVLASNAMAIEILLGSDDGGLAF 82 Query: 189 VPNAFSVAAGEKITFKNNAGFPHNVV 266 VPN+FSVA GEKITFKNNAGFPHNVV Sbjct: 83 VPNSFSVAPGEKITFKNNAGFPHNVV 108 >gb|AFK36672.1| unknown [Lotus japonicus] gi|388497476|gb|AFK36804.1| unknown [Lotus japonicus] Length = 167 Score = 73.2 bits (178), Expect = 2e-11 Identities = 47/86 (54%), Positives = 51/86 (59%), Gaps = 4/86 (4%) Frame = +3 Query: 21 TAKVSSAPM----LSIKASSLKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDGGLAF 188 +AKVSS+P LS+KAS LKD GSDDGGLAF Sbjct: 27 SAKVSSSPSQMPRLSVKAS-LKD---FGVAVVATAASAVLASNAMAIEILLGSDDGGLAF 82 Query: 189 VPNAFSVAAGEKITFKNNAGFPHNVV 266 VPN+FSVA GEKITFKNNAGFPHNVV Sbjct: 83 VPNSFSVAPGEKITFKNNAGFPHNVV 108 >emb|CAJ34813.1| plastocyanine [Plantago major] Length = 191 Score = 72.8 bits (177), Expect = 3e-11 Identities = 44/88 (50%), Positives = 47/88 (53%) Frame = +3 Query: 3 TTSRITTAKVSSAPMLSIKASSLKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDGGL 182 TTSR+TTA P +IKAS LKD G DDG L Sbjct: 49 TTSRLTTATFKPTPKFAIKAS-LKD---FGVAVAATAASALIASNAMAIDVLLGGDDGSL 104 Query: 183 AFVPNAFSVAAGEKITFKNNAGFPHNVV 266 AF+P F VAAGEKITFKNNAGFPHNVV Sbjct: 105 AFIPGNFEVAAGEKITFKNNAGFPHNVV 132 >prf||0512262B plastocyanin Length = 99 Score = 70.9 bits (172), Expect = 1e-10 Identities = 32/35 (91%), Positives = 33/35 (94%) Frame = +3 Query: 162 GSDDGGLAFVPNAFSVAAGEKITFKNNAGFPHNVV 266 GSDDGGLAFVPN FS+AAGEKI FKNNAGFPHNVV Sbjct: 6 GSDDGGLAFVPNNFSIAAGEKIVFKNNAGFPHNVV 40 >gb|ACV32157.1| chloroplast plastocyanin precursor [Nicotiana benthamiana] Length = 169 Score = 70.1 bits (170), Expect = 2e-10 Identities = 47/92 (51%), Positives = 55/92 (59%), Gaps = 4/92 (4%) Frame = +3 Query: 3 TTSRI-TTAKVSS---APMLSIKASSLKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXGSD 170 +TSR+ TTAKV++ A L++KAS LKD GSD Sbjct: 23 STSRVSTTAKVAASTPATKLAVKAS-LKD---VGAVVVATAASAMLASNAMAIEVLLGSD 78 Query: 171 DGGLAFVPNAFSVAAGEKITFKNNAGFPHNVV 266 DGGLAFVP FSV++GEKITFKNNAGFPHNVV Sbjct: 79 DGGLAFVPGNFSVSSGEKITFKNNAGFPHNVV 110