BLASTX nr result

ID: Bupleurum21_contig00001568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001568
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44580.1| unknown [Lotus japonicus]                               73   2e-11
gb|AFK36672.1| unknown [Lotus japonicus] gi|388497476|gb|AFK3680...    73   2e-11
emb|CAJ34813.1| plastocyanine [Plantago major]                         73   3e-11
prf||0512262B plastocyanin                                             71   1e-10
gb|ACV32157.1| chloroplast plastocyanin precursor [Nicotiana ben...    70   2e-10

>gb|AFK44580.1| unknown [Lotus japonicus]
          Length = 167

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/86 (54%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
 Frame = +3

Query: 21  TAKVSSAPM----LSIKASSLKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDGGLAF 188
           +AKVSS+P     LS+KAS LKD                            GSDDGGLAF
Sbjct: 27  SAKVSSSPSQMPRLSVKAS-LKD---FGVAVVATAASAVLASNAMAIEILLGSDDGGLAF 82

Query: 189 VPNAFSVAAGEKITFKNNAGFPHNVV 266
           VPN+FSVA GEKITFKNNAGFPHNVV
Sbjct: 83  VPNSFSVAPGEKITFKNNAGFPHNVV 108


>gb|AFK36672.1| unknown [Lotus japonicus] gi|388497476|gb|AFK36804.1| unknown
           [Lotus japonicus]
          Length = 167

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/86 (54%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
 Frame = +3

Query: 21  TAKVSSAPM----LSIKASSLKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDGGLAF 188
           +AKVSS+P     LS+KAS LKD                            GSDDGGLAF
Sbjct: 27  SAKVSSSPSQMPRLSVKAS-LKD---FGVAVVATAASAVLASNAMAIEILLGSDDGGLAF 82

Query: 189 VPNAFSVAAGEKITFKNNAGFPHNVV 266
           VPN+FSVA GEKITFKNNAGFPHNVV
Sbjct: 83  VPNSFSVAPGEKITFKNNAGFPHNVV 108


>emb|CAJ34813.1| plastocyanine [Plantago major]
          Length = 191

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/88 (50%), Positives = 47/88 (53%)
 Frame = +3

Query: 3   TTSRITTAKVSSAPMLSIKASSLKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDDGGL 182
           TTSR+TTA     P  +IKAS LKD                            G DDG L
Sbjct: 49  TTSRLTTATFKPTPKFAIKAS-LKD---FGVAVAATAASALIASNAMAIDVLLGGDDGSL 104

Query: 183 AFVPNAFSVAAGEKITFKNNAGFPHNVV 266
           AF+P  F VAAGEKITFKNNAGFPHNVV
Sbjct: 105 AFIPGNFEVAAGEKITFKNNAGFPHNVV 132


>prf||0512262B plastocyanin
          Length = 99

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +3

Query: 162 GSDDGGLAFVPNAFSVAAGEKITFKNNAGFPHNVV 266
           GSDDGGLAFVPN FS+AAGEKI FKNNAGFPHNVV
Sbjct: 6   GSDDGGLAFVPNNFSIAAGEKIVFKNNAGFPHNVV 40


>gb|ACV32157.1| chloroplast plastocyanin precursor [Nicotiana benthamiana]
          Length = 169

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 47/92 (51%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
 Frame = +3

Query: 3   TTSRI-TTAKVSS---APMLSIKASSLKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXGSD 170
           +TSR+ TTAKV++   A  L++KAS LKD                            GSD
Sbjct: 23  STSRVSTTAKVAASTPATKLAVKAS-LKD---VGAVVVATAASAMLASNAMAIEVLLGSD 78

Query: 171 DGGLAFVPNAFSVAAGEKITFKNNAGFPHNVV 266
           DGGLAFVP  FSV++GEKITFKNNAGFPHNVV
Sbjct: 79  DGGLAFVPGNFSVSSGEKITFKNNAGFPHNVV 110


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