BLASTX nr result

ID: Bupleurum21_contig00001557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001557
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237491.1| serine hydroxymethyltransferase 3 [Glycine m...   354   5e-96
sp|P50433.1|GLYM_SOLTU RecName: Full=Serine hydroxymethyltransfe...   353   7e-96
ref|NP_001237509.1| serine hydroxymethyltransferase 5 [Glycine m...   353   1e-95
ref|XP_002527226.1| serine hydroxymethyltransferase, putative [R...   351   3e-95
sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransfera...   349   1e-94

>ref|NP_001237491.1| serine hydroxymethyltransferase 3 [Glycine max]
           gi|222142533|gb|ACM45953.1| serine
           hydroxymethyltransferase 3 [Glycine max]
          Length = 516

 Score =  354 bits (908), Expect = 5e-96
 Identities = 171/178 (96%), Positives = 177/178 (99%)
 Frame = -1

Query: 534 WGVNVQPLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 355
           WGVNVQPLSGSP+NF VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM
Sbjct: 139 WGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 198

Query: 354 PYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCDKQKAILLADMA 175
           PYRLNESTGYIDYDQ+EKSATLFRPKLIVAGASAYARLYDY+R+RKVCDKQKAILLADMA
Sbjct: 199 PYRLNESTGYIDYDQMEKSATLFRPKLIVAGASAYARLYDYERVRKVCDKQKAILLADMA 258

Query: 174 HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKEVLYDFE 1
           HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKE+NKQGKEVLYD+E
Sbjct: 259 HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEINKQGKEVLYDYE 316


>sp|P50433.1|GLYM_SOLTU RecName: Full=Serine hydroxymethyltransferase, mitochondrial;
           Short=SHMT; AltName: Full=Glycine
           hydroxymethyltransferase; AltName: Full=Serine
           methylase; Flags: Precursor gi|438247|emb|CAA81082.1|
           glycine hydroxymethyltransferase [Solanum tuberosum]
          Length = 518

 Score =  353 bits (907), Expect = 7e-96
 Identities = 173/178 (97%), Positives = 177/178 (99%)
 Frame = -1

Query: 534 WGVNVQPLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 355
           WGVNVQPLSGSP+NFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM
Sbjct: 141 WGVNVQPLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 200

Query: 354 PYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCDKQKAILLADMA 175
           PYRL+ESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVC+KQKAILLADMA
Sbjct: 201 PYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCNKQKAILLADMA 260

Query: 174 HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKEVLYDFE 1
           HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKEV YD+E
Sbjct: 261 HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKEVFYDYE 318


>ref|NP_001237509.1| serine hydroxymethyltransferase 5 [Glycine max]
           gi|222142537|gb|ACM45955.1| serine
           hydroxymethyltransferase 5 [Glycine max]
          Length = 518

 Score =  353 bits (905), Expect = 1e-95
 Identities = 170/178 (95%), Positives = 177/178 (99%)
 Frame = -1

Query: 534 WGVNVQPLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 355
           WGVNVQPLSGSP+NF VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM
Sbjct: 141 WGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 200

Query: 354 PYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCDKQKAILLADMA 175
           PYRLNESTGYIDYDQ+EKSATLFRPKLIVAGASAYARLYDY+R+RKVCDKQKAILLADMA
Sbjct: 201 PYRLNESTGYIDYDQMEKSATLFRPKLIVAGASAYARLYDYERVRKVCDKQKAILLADMA 260

Query: 174 HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKEVLYDFE 1
           HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKE+NKQGKE+LYD+E
Sbjct: 261 HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEINKQGKELLYDYE 318


>ref|XP_002527226.1| serine hydroxymethyltransferase, putative [Ricinus communis]
           gi|223533402|gb|EEF35152.1| serine
           hydroxymethyltransferase, putative [Ricinus communis]
          Length = 515

 Score =  351 bits (901), Expect = 3e-95
 Identities = 172/178 (96%), Positives = 176/178 (98%)
 Frame = -1

Query: 534 WGVNVQPLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 355
           WGVNVQ LSGSP+NFQVYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM
Sbjct: 141 WGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 200

Query: 354 PYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCDKQKAILLADMA 175
           PYRLNESTGYIDYDQLEKSA LFRPKLIVAGASAYARLYDY+RIRKVCDKQKAILLADMA
Sbjct: 201 PYRLNESTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYERIRKVCDKQKAILLADMA 260

Query: 174 HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKEVLYDFE 1
           HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKEVLYD+E
Sbjct: 261 HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKEVLYDYE 318


>sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransferase, mitochondrial;
           Short=SHMT; AltName: Full=Glycine
           hydroxymethyltransferase; AltName: Full=Serine
           methylase; Flags: Precursor gi|169158|gb|AAA33687.1|
           serine hydroxymethyltransferase [Pisum sativum]
          Length = 518

 Score =  349 bits (896), Expect = 1e-94
 Identities = 170/178 (95%), Positives = 176/178 (98%)
 Frame = -1

Query: 534 WGVNVQPLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 355
           WGVNVQPLSGSPSNFQVYTALLKPH+RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM
Sbjct: 141 WGVNVQPLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 200

Query: 354 PYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCDKQKAILLADMA 175
           PYRL+ESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY RIRKVCDKQKA+LLADMA
Sbjct: 201 PYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAVLLADMA 260

Query: 174 HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKEVLYDFE 1
           HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIF+RKG+KEVNKQGKEV YD+E
Sbjct: 261 HISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQGKEVFYDYE 318


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