BLASTX nr result

ID: Bupleurum21_contig00001547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001547
         (1499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   646   0.0  
ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precu...   641   0.0  
ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   639   0.0  
emb|CAN88916.1| glutamyl tRNA Reductase [Nicotiana tabacum]           638   e-180
ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN...   636   e-180

>ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic [Vitis vinifera]
            gi|147816412|emb|CAN77439.1| hypothetical protein
            VITISV_007402 [Vitis vinifera]
          Length = 545

 Score =  646 bits (1667), Expect = 0.0
 Identities = 334/409 (81%), Positives = 353/409 (86%)
 Frame = -2

Query: 1228 VEMREKLAIPEAEWPRAISELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS 1049
            VEMREKLAIPEAEWPRAI ELC+LNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS
Sbjct: 109  VEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS 168

Query: 1048 KTSGVPASELCEHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAXXXXXXXXXXXXXGF 869
            KTSGVP SELC HRFLLYN DATQH+FEVSAGLDSLVLGEGQILA             GF
Sbjct: 169  KTSGVPVSELCHHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGF 228

Query: 868  GRNISGLFKHAITVGKRVRSELNIXXXXXXXXXXXVELALMKLPTTSNTTARMLVIGAGK 689
            GRNISGLFKHAITVGKRVR+E NI           VELALMKLP +S+ TARMLVIGAGK
Sbjct: 229  GRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGK 288

Query: 688  MGKLVIKHLVAKGCTKMVVVNRSEERVTVIREELKGIEIIYKPLTEMLAAAAEADVIFTS 509
            MGKLVIKHLVAKGCTKMV+VNR EERV  IREE+K +EIIY+PLTEMLA AAEADV+FTS
Sbjct: 289  MGKLVIKHLVAKGCTKMVIVNRGEERVAAIREEMKDVEIIYRPLTEMLACAAEADVVFTS 348

Query: 508  TASETPLFLKEHVADFPPVGSDVGSVRLFVDIAVPRNVGSCIKELETARVYNVDDLKEVV 329
            TASETPLFLKEHV D P VG DVG +RLFVDI+VPRNVG+C+ +LETARVYNVDDLKEVV
Sbjct: 349  TASETPLFLKEHVKDLPAVGQDVGGLRLFVDISVPRNVGACVSDLETARVYNVDDLKEVV 408

Query: 328  AANKEDRHRKAMEAQSIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELDKCMSKM 149
            AANKEDR RKAMEAQ+II EESKQFEAWRDSLETVPTIKKLRAYAERIR+AEL+KC+SKM
Sbjct: 409  AANKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAYAERIRVAELEKCLSKM 468

Query: 148  GXXXXXXXXXXXXDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH 2
            G            DLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH
Sbjct: 469  GDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH 517


>ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus
            communis] gi|223550696|gb|EEF52182.1| Glutamyl-tRNA
            reductase 1, chloroplast precursor, putative [Ricinus
            communis]
          Length = 565

 Score =  641 bits (1654), Expect = 0.0
 Identities = 332/409 (81%), Positives = 354/409 (86%)
 Frame = -2

Query: 1228 VEMREKLAIPEAEWPRAISELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS 1049
            VEMREKLAIPEAEWPRAI ELCSLNHI+EAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS
Sbjct: 131  VEMREKLAIPEAEWPRAIGELCSLNHIDEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS 190

Query: 1048 KTSGVPASELCEHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAXXXXXXXXXXXXXGF 869
            KTSG+P SE+CEH+FLLYNNDATQH+FEVSAGLDSLVLGEGQILA             GF
Sbjct: 191  KTSGIPVSEICEHQFLLYNNDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGF 250

Query: 868  GRNISGLFKHAITVGKRVRSELNIXXXXXXXXXXXVELALMKLPTTSNTTARMLVIGAGK 689
            GRNISGLFKHAI+VGKRVR+E NI           VELALMKLP +S+ TARMLVIGAGK
Sbjct: 251  GRNISGLFKHAISVGKRVRTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGK 310

Query: 688  MGKLVIKHLVAKGCTKMVVVNRSEERVTVIREELKGIEIIYKPLTEMLAAAAEADVIFTS 509
            MGKLVIKHLVAKGCTKMVVVNRSEERV  IREE+K +EIIYKPL EML  AAEADV+FTS
Sbjct: 311  MGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEIKDVEIIYKPLDEMLTCAAEADVVFTS 370

Query: 508  TASETPLFLKEHVADFPPVGSDVGSVRLFVDIAVPRNVGSCIKELETARVYNVDDLKEVV 329
            TASETPLFLKE+V D P V S+VGS+RLFVDI+VPRNVGSC+ ++E ARVYNVDDLKEVV
Sbjct: 371  TASETPLFLKENVKDLPSVSSEVGSLRLFVDISVPRNVGSCVNDVEKARVYNVDDLKEVV 430

Query: 328  AANKEDRHRKAMEAQSIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELDKCMSKM 149
            AANKEDR RKAMEAQ+II EESKQFEAWRDSLETVPTIKKLRAYAERIR+AELDKC+SKM
Sbjct: 431  AANKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKM 490

Query: 148  GXXXXXXXXXXXXDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH 2
            G            DLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH
Sbjct: 491  GEEIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH 539


>ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Cucumis
            sativus] gi|2495155|sp|P93111.1|HEM11_CUCSA RecName:
            Full=Glutamyl-tRNA reductase 1, chloroplastic;
            Short=GluTR; Flags: Precursor gi|1694926|dbj|BAA08910.1|
            glutamyl-tRNA reductase [Cucumis sativus]
          Length = 552

 Score =  639 bits (1647), Expect = 0.0
 Identities = 333/409 (81%), Positives = 348/409 (85%)
 Frame = -2

Query: 1228 VEMREKLAIPEAEWPRAISELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS 1049
            VEMREKLAIPEAEWPRAI ELC LNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS
Sbjct: 116  VEMREKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS 175

Query: 1048 KTSGVPASELCEHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAXXXXXXXXXXXXXGF 869
            KTSG+P SE+C+HRFLLYNNDATQHIFEVSAGLDSLVLGEGQILA             GF
Sbjct: 176  KTSGIPVSEICQHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVAGF 235

Query: 868  GRNISGLFKHAITVGKRVRSELNIXXXXXXXXXXXVELALMKLPTTSNTTARMLVIGAGK 689
            GRNISGLFKHAITVGKRVR+E NI           VELALMKLP  S+ TARMLVIGAGK
Sbjct: 236  GRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEPSHATARMLVIGAGK 295

Query: 688  MGKLVIKHLVAKGCTKMVVVNRSEERVTVIREELKGIEIIYKPLTEMLAAAAEADVIFTS 509
            MGKLVIKHLVAKGCTKMVVVNRSEERVT IREE+K +EIIYKPLTEML+  AEADVIFTS
Sbjct: 296  MGKLVIKHLVAKGCTKMVVVNRSEERVTAIREEMKDVEIIYKPLTEMLSCTAEADVIFTS 355

Query: 508  TASETPLFLKEHVADFPPVGSDVGSVRLFVDIAVPRNVGSCIKELETARVYNVDDLKEVV 329
            TASE+ LF KE V D PPVG DVG +RLF+DI+VPRNVG+CI  LE  RVYNVDDLKEVV
Sbjct: 356  TASESLLFTKEQVKDLPPVGHDVGGLRLFIDISVPRNVGACINNLEDVRVYNVDDLKEVV 415

Query: 328  AANKEDRHRKAMEAQSIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELDKCMSKM 149
            AANKEDR RKAMEAQSII EESKQFEAWRDSLETVPTIKKLRAYAERIR AEL+KC+SKM
Sbjct: 416  AANKEDRLRKAMEAQSIITEESKQFEAWRDSLETVPTIKKLRAYAERIRTAELEKCLSKM 475

Query: 148  GXXXXXXXXXXXXDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH 2
            G            DLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH
Sbjct: 476  GDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH 524


>emb|CAN88916.1| glutamyl tRNA Reductase [Nicotiana tabacum]
          Length = 542

 Score =  638 bits (1645), Expect = e-180
 Identities = 329/409 (80%), Positives = 356/409 (87%)
 Frame = -2

Query: 1228 VEMREKLAIPEAEWPRAISELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS 1049
            VE+REKLAIPEAEWPRAI ELC+LNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS
Sbjct: 106  VEIREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS 165

Query: 1048 KTSGVPASELCEHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAXXXXXXXXXXXXXGF 869
            KTSGVP +E+C+HRFLLYNNDATQH+FEVSAGLDSLVLGEGQILA             GF
Sbjct: 166  KTSGVPVTEICKHRFLLYNNDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVTGF 225

Query: 868  GRNISGLFKHAITVGKRVRSELNIXXXXXXXXXXXVELALMKLPTTSNTTARMLVIGAGK 689
            GRNISGLFKHAITVGKRVR+E NI           VELALMKLP +S+ +ARMLVIGAGK
Sbjct: 226  GRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPESSHASARMLVIGAGK 285

Query: 688  MGKLVIKHLVAKGCTKMVVVNRSEERVTVIREELKGIEIIYKPLTEMLAAAAEADVIFTS 509
            MGKLVIKHLVAKGCT+MVVVNR+EERV+ IREE+K +EIIYKPL+EML +AAEADVIFTS
Sbjct: 286  MGKLVIKHLVAKGCTRMVVVNRTEERVSAIREEIKDVEIIYKPLSEMLNSAAEADVIFTS 345

Query: 508  TASETPLFLKEHVADFPPVGSDVGSVRLFVDIAVPRNVGSCIKELETARVYNVDDLKEVV 329
            TASETPLFLKEHV D P V + VG +RLFVDI+VPRNVG+C+ ELE ARVYNVDDLKEVV
Sbjct: 346  TASETPLFLKEHVLDLPAVAASVGGLRLFVDISVPRNVGACVNELENARVYNVDDLKEVV 405

Query: 328  AANKEDRHRKAMEAQSIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELDKCMSKM 149
            AANKEDR RKAMEAQ+II+EESKQFEAWRDSLETVPTIKKLRAYAER+R+AEL+KCMSKM
Sbjct: 406  AANKEDRLRKAMEAQAIISEESKQFEAWRDSLETVPTIKKLRAYAERLRVAELEKCMSKM 465

Query: 148  GXXXXXXXXXXXXDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH 2
            G            DLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH
Sbjct: 466  GDDISKKTRKAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH 514


>ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA reductase 1,
            chloroplastic-like [Cucumis sativus]
          Length = 552

 Score =  636 bits (1641), Expect = e-180
 Identities = 332/409 (81%), Positives = 347/409 (84%)
 Frame = -2

Query: 1228 VEMREKLAIPEAEWPRAISELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS 1049
            VEMREKLAIPEAEWPRAI ELC LNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS
Sbjct: 116  VEMREKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMS 175

Query: 1048 KTSGVPASELCEHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAXXXXXXXXXXXXXGF 869
            KTSG+P SE+C+HRFLLYNNDATQHIFEVSAGLDSLVLGEGQILA             GF
Sbjct: 176  KTSGIPVSEICQHRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVAGF 235

Query: 868  GRNISGLFKHAITVGKRVRSELNIXXXXXXXXXXXVELALMKLPTTSNTTARMLVIGAGK 689
            GRNISGLFKHAITVGKRVR+E NI           VELALMKLP  S+ TARMLVIGAGK
Sbjct: 236  GRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEPSHATARMLVIGAGK 295

Query: 688  MGKLVIKHLVAKGCTKMVVVNRSEERVTVIREELKGIEIIYKPLTEMLAAAAEADVIFTS 509
            MGKLVIKHLVAKGCTKMVVVNRSEERVT IREE+K +EIIYKPLTEML+  AEADVIFTS
Sbjct: 296  MGKLVIKHLVAKGCTKMVVVNRSEERVTAIREEMKDVEIIYKPLTEMLSCTAEADVIFTS 355

Query: 508  TASETPLFLKEHVADFPPVGSDVGSVRLFVDIAVPRNVGSCIKELETARVYNVDDLKEVV 329
            TASE+ LF KE V D PPVG DVG +RLF+DI+VPRNVG+CI  LE  RVYNVDDLKEVV
Sbjct: 356  TASESLLFTKEQVKDLPPVGHDVGGLRLFIDISVPRNVGACINNLEDVRVYNVDDLKEVV 415

Query: 328  AANKEDRHRKAMEAQSIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELDKCMSKM 149
            AANKEDR RKAMEAQSII EESKQFEAWRDSLETVPTI KLRAYAERIR AEL+KC+SKM
Sbjct: 416  AANKEDRLRKAMEAQSIITEESKQFEAWRDSLETVPTIXKLRAYAERIRTAELEKCLSKM 475

Query: 148  GXXXXXXXXXXXXDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH 2
            G            DLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH
Sbjct: 476  GDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMH 524


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