BLASTX nr result

ID: Bupleurum21_contig00001544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001544
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33546.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_003633718.1| PREDICTED: uncharacterized protein LOC100243...   109   3e-22
ref|XP_002532970.1| conserved hypothetical protein [Ricinus comm...    97   2e-18
ref|XP_002302952.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002305208.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17

>emb|CBI33546.3| unnamed protein product [Vitis vinifera]
          Length = 183

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/106 (55%), Positives = 72/106 (67%)
 Frame = +2

Query: 83  VVTFLCASHDFTGSKRRKRELNTVRLGGGDEKKGLSKLQSNISSKALLMVKMVSWRKTDH 262
           +V+FLCASH  T   + K E       G  + K +  L SNISSKALLMVKMVSWRK   
Sbjct: 65  LVSFLCASHRITKPHKLKEEGK-----GAVKSKLVRSLNSNISSKALLMVKMVSWRKV-- 117

Query: 263 QEEGQQENRYDDSEDEAVVWKRTIIMGGKCRPLEFSGKIAYDSHGN 400
           Q EG++ +   D +D+  VWKRTI+MG +CRPL+FSGKIAYDS GN
Sbjct: 118 QVEGEEGDYNSDGDDDEAVWKRTIMMGERCRPLDFSGKIAYDSQGN 163


>ref|XP_003633718.1| PREDICTED: uncharacterized protein LOC100243237 [Vitis vinifera]
          Length = 154

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/106 (55%), Positives = 72/106 (67%)
 Frame = +2

Query: 83  VVTFLCASHDFTGSKRRKRELNTVRLGGGDEKKGLSKLQSNISSKALLMVKMVSWRKTDH 262
           +V+FLCASH  T   + K E       G  + K +  L SNISSKALLMVKMVSWRK   
Sbjct: 36  LVSFLCASHRITKPHKLKEEGK-----GAVKSKLVRSLNSNISSKALLMVKMVSWRKV-- 88

Query: 263 QEEGQQENRYDDSEDEAVVWKRTIIMGGKCRPLEFSGKIAYDSHGN 400
           Q EG++ +   D +D+  VWKRTI+MG +CRPL+FSGKIAYDS GN
Sbjct: 89  QVEGEEGDYNSDGDDDEAVWKRTIMMGERCRPLDFSGKIAYDSQGN 134


>ref|XP_002532970.1| conserved hypothetical protein [Ricinus communis]
           gi|223527263|gb|EEF29421.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 131

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 56/119 (47%), Positives = 69/119 (57%), Gaps = 13/119 (10%)
 Frame = +2

Query: 83  VVTFLCASHDFTGSKRRKRELNTVRLGGGD-------------EKKGLSKLQSNISSKAL 223
           VVTFLC SH    S  +  + N+                    EK+ LSKL SNISSKAL
Sbjct: 7   VVTFLCTSHKTKKSSHKPNDENSSSSSSSSSSSSSSSSSQSASEKRLLSKLNSNISSKAL 66

Query: 224 LMVKMVSWRKTDHQEEGQQENRYDDSEDEAVVWKRTIIMGGKCRPLEFSGKIAYDSHGN 400
           L+VKM+SW+K  H+EE  +E+     E E  VWK+TI+MG +C PL FSGKI YD  GN
Sbjct: 67  LVVKMISWKKL-HEEEDHEED-----ESEEAVWKKTIMMGERCCPLNFSGKIEYDCQGN 119


>ref|XP_002302952.1| predicted protein [Populus trichocarpa] gi|222844678|gb|EEE82225.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/106 (47%), Positives = 70/106 (66%)
 Frame = +2

Query: 83  VVTFLCASHDFTGSKRRKRELNTVRLGGGDEKKGLSKLQSNISSKALLMVKMVSWRKTDH 262
           +VTFLCASH      +R+ +  +V    G EK+ LSK+ S+I  KA  MVKM+SWRK + 
Sbjct: 34  LVTFLCASHHKARKSQRQGDEESVISHSG-EKRLLSKINSDIREKAHSMVKMISWRKLEQ 92

Query: 263 QEEGQQENRYDDSEDEAVVWKRTIIMGGKCRPLEFSGKIAYDSHGN 400
            E+  ++   DD  +E  +W+R+I+MG +CRPL+FSGKI YD  GN
Sbjct: 93  DEDCDED--CDDGSEE--IWRRSIVMGERCRPLDFSGKIMYDCEGN 134


>ref|XP_002305208.1| predicted protein [Populus trichocarpa] gi|222848172|gb|EEE85719.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/106 (46%), Positives = 64/106 (60%)
 Frame = +2

Query: 83  VVTFLCASHDFTGSKRRKRELNTVRLGGGDEKKGLSKLQSNISSKALLMVKMVSWRKTDH 262
           +VTFLCASH       R+++   V      EKK LSK+ S+I  KA  MVKM+SWRK   
Sbjct: 36  LVTFLCASHHKAKKSHRQKDEERVT-SHSSEKKLLSKINSDIKEKAHSMVKMISWRKLAQ 94

Query: 263 QEEGQQENRYDDSEDEAVVWKRTIIMGGKCRPLEFSGKIAYDSHGN 400
            E+G +E           +W+R+IIMG +CRP++FSGKI YD  GN
Sbjct: 95  DEDGDEE-----------IWRRSIIMGERCRPIDFSGKIMYDCEGN 129


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