BLASTX nr result

ID: Bupleurum21_contig00001493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001493
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, c...   108   6e-22
emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]                 108   6e-22
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana s...   108   6e-22
emb|CBI39142.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   105   3e-21

>sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
           Precursor gi|100390|pir||S12111 ribonucleoprotein, 33K,
           precursor - common tobacco gi|20005|emb|CAA37879.1|
           unnamed protein product [Nicotiana tabacum]
          Length = 324

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = -1

Query: 172 IVYDRITDRSRGFAFVTMASVEEAKEAIHMFNGSQVGGRTVKVNFPEVPRGGEREVM 2
           IVYDR+TDRSRGFAFVTM SVEEAKEAI +F+GSQVGGRTVKVNFPEVPRGGEREVM
Sbjct: 145 IVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVM 201


>emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
          Length = 292

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = -1

Query: 172 IVYDRITDRSRGFAFVTMASVEEAKEAIHMFNGSQVGGRTVKVNFPEVPRGGEREVM 2
           IVYDR+TDRSRGFAFVTM SVEEAKEAI +F+GSQVGGRTVKVNFPEVPRGGEREVM
Sbjct: 134 IVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVM 190


>emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
          Length = 319

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = -1

Query: 172 IVYDRITDRSRGFAFVTMASVEEAKEAIHMFNGSQVGGRTVKVNFPEVPRGGEREVM 2
           IVYDR+TDRSRGFAFVTM SVEEAKEAI +F+GSQVGGRTVKVNFPEVPRGGEREVM
Sbjct: 140 IVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVM 196


>emb|CBI39142.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/57 (89%), Positives = 54/57 (94%)
 Frame = -1

Query: 172 IVYDRITDRSRGFAFVTMASVEEAKEAIHMFNGSQVGGRTVKVNFPEVPRGGEREVM 2
           IVYDR+TDRSRGFAFVTM SV+EAKEAI MF+GSQVGGRTVKVNFPEVPRGGER VM
Sbjct: 21  IVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVM 77


>ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 311

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/57 (89%), Positives = 54/57 (94%)
 Frame = -1

Query: 172 IVYDRITDRSRGFAFVTMASVEEAKEAIHMFNGSQVGGRTVKVNFPEVPRGGEREVM 2
           IVYDR+TDRSRGFAFVTM SV+EAKEAI MF+GSQVGGRTVKVNFPEVPRGGER VM
Sbjct: 134 IVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVM 190


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