BLASTX nr result
ID: Bupleurum21_contig00001492
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00001492
(724 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI34828.3| unnamed protein product [Vitis vinifera] 228 1e-57
ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 228 1e-57
emb|CBI14910.3| unnamed protein product [Vitis vinifera] 223 3e-56
ref|XP_002278832.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 223 3e-56
emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis vinifera] 223 3e-56
>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 228 bits (581), Expect = 1e-57
Identities = 128/228 (56%), Positives = 142/228 (62%)
Frame = +1
Query: 40 SYAEPPEDAKLFVGNLPYDHDSAKLAELFLQAGVVEIAEVIYNRQTDQSRGFGFVTMHTV 219
+Y+EPPE+AKLFVGNLPYD DS KLA+LF +AGVVEIAEVIYNR+TDQSRGFGF+TM TV
Sbjct: 85 TYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTV 144
Query: 220 EEAEKAVEMFNRYDLSGRFLTVNKAAPRGSPPERSARVFESSFRIYVGNLXAVEMFNRYD 399
EEAEKA VEMFNRYD
Sbjct: 145 EEAEKA----------------------------------------------VEMFNRYD 158
Query: 400 LGGRLLTVNKAAPRGSPPERSPRTFEPSFRIYVGXXXXXXXXXXXXXXXXXXXXXXSFRI 579
L GR LTVNKAAPRGS PER P+ FEPSFRI
Sbjct: 159 LNGRFLTVNKAAPRGSRPERPPQAFEPSFRI----------------------------- 189
Query: 580 YVGNLPWQVDNGRLEQLFSEHGKVIDARVVFDRETGRSRGFGFVTMAS 723
YVGNLPWQVD+ RLEQ+FSEHGKV+DARVV+DR+T RSRGFGFVTM+S
Sbjct: 190 YVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSS 237
Score = 68.9 bits (167), Expect = 1e-09
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +1
Query: 67 KLFVGNLPYDHDSAKLAELFLQAGVVEIAEVIYNRQTDQSRGFGFVTMHTVEEAEKAVEM 246
+++VGNLP+ D A+L ++F + G V A V+Y+R T +SRGFGFVTM + E A+
Sbjct: 188 RIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAA 247
Query: 247 FNRYDLSGRFLTVNKAAPR 303
+ L GR + VN A R
Sbjct: 248 LDGQSLDGRAIRVNVAEER 266
>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 312
Score = 228 bits (581), Expect = 1e-57
Identities = 128/228 (56%), Positives = 142/228 (62%)
Frame = +1
Query: 40 SYAEPPEDAKLFVGNLPYDHDSAKLAELFLQAGVVEIAEVIYNRQTDQSRGFGFVTMHTV 219
+Y+EPPE+AKLFVGNLPYD DS KLA+LF +AGVVEIAEVIYNR+TDQSRGFGF+TM TV
Sbjct: 125 TYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTV 184
Query: 220 EEAEKAVEMFNRYDLSGRFLTVNKAAPRGSPPERSARVFESSFRIYVGNLXAVEMFNRYD 399
EEAEKA VEMFNRYD
Sbjct: 185 EEAEKA----------------------------------------------VEMFNRYD 198
Query: 400 LGGRLLTVNKAAPRGSPPERSPRTFEPSFRIYVGXXXXXXXXXXXXXXXXXXXXXXSFRI 579
L GR LTVNKAAPRGS PER P+ FEPSFRI
Sbjct: 199 LNGRFLTVNKAAPRGSRPERPPQAFEPSFRI----------------------------- 229
Query: 580 YVGNLPWQVDNGRLEQLFSEHGKVIDARVVFDRETGRSRGFGFVTMAS 723
YVGNLPWQVD+ RLEQ+FSEHGKV+DARVV+DR+T RSRGFGFVTM+S
Sbjct: 230 YVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSS 277
Score = 68.9 bits (167), Expect = 1e-09
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +1
Query: 67 KLFVGNLPYDHDSAKLAELFLQAGVVEIAEVIYNRQTDQSRGFGFVTMHTVEEAEKAVEM 246
+++VGNLP+ D A+L ++F + G V A V+Y+R T +SRGFGFVTM + E A+
Sbjct: 228 RIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAA 287
Query: 247 FNRYDLSGRFLTVNKAAPR 303
+ L GR + VN A R
Sbjct: 288 LDGQSLDGRAIRVNVAEER 306
>emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 223 bits (568), Expect = 3e-56
Identities = 125/228 (54%), Positives = 142/228 (62%)
Frame = +1
Query: 40 SYAEPPEDAKLFVGNLPYDHDSAKLAELFLQAGVVEIAEVIYNRQTDQSRGFGFVTMHTV 219
SY+EPPE+AK+FVGNLPYD DS +LA LF QAGVVEIAEVIYNR+TD+SRGFGFV+M TV
Sbjct: 119 SYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTV 178
Query: 220 EEAEKAVEMFNRYDLSGRFLTVNKAAPRGSPPERSARVFESSFRIYVGNLXAVEMFNRYD 399
EEAEKA V+MF+RY+
Sbjct: 179 EEAEKA----------------------------------------------VDMFHRYE 192
Query: 400 LGGRLLTVNKAAPRGSPPERSPRTFEPSFRIYVGXXXXXXXXXXXXXXXXXXXXXXSFRI 579
L GRLLTVNKAAPRGS PER PR FEP+FR+YV
Sbjct: 193 LDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYV--------------------------- 225
Query: 580 YVGNLPWQVDNGRLEQLFSEHGKVIDARVVFDRETGRSRGFGFVTMAS 723
GNLPW VD+ RLEQ+FSEHGKV++ARVVFDRETGRSRGFGFVTM+S
Sbjct: 226 --GNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSS 271
Score = 74.7 bits (182), Expect = 2e-11
Identities = 40/87 (45%), Positives = 57/87 (65%)
Frame = +1
Query: 67 KLFVGNLPYDHDSAKLAELFLQAGVVEIAEVIYNRQTDQSRGFGFVTMHTVEEAEKAVEM 246
+++VGNLP+D DSA+L ++F + G V A V+++R+T +SRGFGFVTM + E E A+
Sbjct: 222 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAA 281
Query: 247 FNRYDLSGRFLTVNKAAPRGSPPERSA 327
+ L GR + VN A R P RSA
Sbjct: 282 TDGQTLDGRTIRVNVAEER---PRRSA 305
>ref|XP_002278832.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
Length = 327
Score = 223 bits (568), Expect = 3e-56
Identities = 125/228 (54%), Positives = 142/228 (62%)
Frame = +1
Query: 40 SYAEPPEDAKLFVGNLPYDHDSAKLAELFLQAGVVEIAEVIYNRQTDQSRGFGFVTMHTV 219
SY+EPPE+AK+FVGNLPYD DS +LA LF QAGVVEIAEVIYNR+TD+SRGFGFV+M TV
Sbjct: 140 SYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTV 199
Query: 220 EEAEKAVEMFNRYDLSGRFLTVNKAAPRGSPPERSARVFESSFRIYVGNLXAVEMFNRYD 399
EEAEKA V+MF+RY+
Sbjct: 200 EEAEKA----------------------------------------------VDMFHRYE 213
Query: 400 LGGRLLTVNKAAPRGSPPERSPRTFEPSFRIYVGXXXXXXXXXXXXXXXXXXXXXXSFRI 579
L GRLLTVNKAAPRGS PER PR FEP+FR+YV
Sbjct: 214 LDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYV--------------------------- 246
Query: 580 YVGNLPWQVDNGRLEQLFSEHGKVIDARVVFDRETGRSRGFGFVTMAS 723
GNLPW VD+ RLEQ+FSEHGKV++ARVVFDRETGRSRGFGFVTM+S
Sbjct: 247 --GNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSS 292
Score = 74.7 bits (182), Expect = 2e-11
Identities = 40/87 (45%), Positives = 57/87 (65%)
Frame = +1
Query: 67 KLFVGNLPYDHDSAKLAELFLQAGVVEIAEVIYNRQTDQSRGFGFVTMHTVEEAEKAVEM 246
+++VGNLP+D DSA+L ++F + G V A V+++R+T +SRGFGFVTM + E E A+
Sbjct: 243 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAA 302
Query: 247 FNRYDLSGRFLTVNKAAPRGSPPERSA 327
+ L GR + VN A R P RSA
Sbjct: 303 TDGQTLDGRTIRVNVAEER---PRRSA 326
>emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis vinifera]
Length = 1122
Score = 223 bits (568), Expect = 3e-56
Identities = 125/228 (54%), Positives = 142/228 (62%)
Frame = +1
Query: 40 SYAEPPEDAKLFVGNLPYDHDSAKLAELFLQAGVVEIAEVIYNRQTDQSRGFGFVTMHTV 219
SY+EPPE+AK+FVGNLPYD DS +LA LF QAGVVEIAEVIYNR+TD+SRGFGFV+M TV
Sbjct: 935 SYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTV 994
Query: 220 EEAEKAVEMFNRYDLSGRFLTVNKAAPRGSPPERSARVFESSFRIYVGNLXAVEMFNRYD 399
EEAEKA V+MF+RY+
Sbjct: 995 EEAEKA----------------------------------------------VDMFHRYE 1008
Query: 400 LGGRLLTVNKAAPRGSPPERSPRTFEPSFRIYVGXXXXXXXXXXXXXXXXXXXXXXSFRI 579
L GRLLTVNKAAPRGS PER PR FEP+FR+YV
Sbjct: 1009 LDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYV--------------------------- 1041
Query: 580 YVGNLPWQVDNGRLEQLFSEHGKVIDARVVFDRETGRSRGFGFVTMAS 723
GNLPW VD+ RLEQ+FSEHGKV++ARVVFDRETGRSRGFGFVTM+S
Sbjct: 1042 --GNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSS 1087
Score = 74.7 bits (182), Expect = 2e-11
Identities = 40/87 (45%), Positives = 57/87 (65%)
Frame = +1
Query: 67 KLFVGNLPYDHDSAKLAELFLQAGVVEIAEVIYNRQTDQSRGFGFVTMHTVEEAEKAVEM 246
+++VGNLP+D DSA+L ++F + G V A V+++R+T +SRGFGFVTM + E E A+
Sbjct: 1038 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAA 1097
Query: 247 FNRYDLSGRFLTVNKAAPRGSPPERSA 327
+ L GR + VN A R P RSA
Sbjct: 1098 TDGQTLDGRTIRVNVAEER---PRRSA 1121