BLASTX nr result

ID: Bupleurum21_contig00001489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001489
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|2...   302   1e-79
gb|ABK92443.1| unknown [Populus trichocarpa]                          301   2e-79
ref|XP_003536856.1| PREDICTED: uncharacterized protein LOC100775...   286   9e-75
ref|XP_004148580.1| PREDICTED: uncharacterized protein LOC101203...   281   2e-73
ref|XP_004163974.1| PREDICTED: uncharacterized protein LOC101228...   279   1e-72

>ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|222843264|gb|EEE80811.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  302 bits (773), Expect = 1e-79
 Identities = 147/310 (47%), Positives = 196/310 (63%), Gaps = 14/310 (4%)
 Frame = -3

Query: 889 GLDYWLQWQVFVCALIILIPVSIALNITIKRSKKEGGQQLKSCDLWLPCWKNVHPKWLLL 710
           GL YWL+WQV VCAL I+ P  ++  I IK++K    Q L   DLW P W+ ++P WLL 
Sbjct: 7   GLGYWLRWQVPVCALAIICPSLLSFYI-IKKAKT---QPLYIHDLWKPRWRCLNPLWLLC 62

Query: 709 YRVIAFSSMAFLLYQIXXXXXXXXXXFYTQWTFSLVMLYFAIGILVSARGCWKYSKKP-F 533
           YR  AF  ++ +LY+I          FYTQWTF L+M+YFA+G ++SA GCW   K+P  
Sbjct: 63  YRFFAFLCLSPMLYRIVYLDGAFAFYFYTQWTFMLIMIYFALGTVISAYGCWVSLKQPAV 122

Query: 532 AQDADTDIFIKKEHSDHGRESTTDINATQTKS-------------LIDQEAGALENLMQS 392
           ++  +  +F+K++  +    + T I   + KS              I + AG    LMQ 
Sbjct: 123 SEHGENSVFLKRDVEEDA--TATSITYKEKKSGGTIKLRSHCAEEAIRERAGFWGYLMQI 180

Query: 391 IYHACGGAVMLTDLVFWFILLPLMSGKDFTLTMLIGLMHSVNVVLLFLDSAFNSHPYPWS 212
           IY  C GAV+LTD++FW I++P +S     L  L+G MHS+N V L LD+A NS P+PW 
Sbjct: 181 IYQTCAGAVILTDIIFWCIIVPFLSNTHLGLNALMGCMHSLNAVFLLLDTALNSLPFPWF 240

Query: 211 QFTYFVLWSGTYIVFQWTVHACGVTWWPYPFLELNTPWAPAWYFGLALFHIPCYGLYALL 32
           +  YFV WS  Y++FQW +HACG TWWPYPFLELNTPWAP WYF +A+ HIPCYG+YAL+
Sbjct: 241 RLAYFVQWSCLYVIFQWVIHACGFTWWPYPFLELNTPWAPLWYFAMAVIHIPCYGIYALI 300

Query: 31  IKAKHFIFSR 2
            KAK+ IF R
Sbjct: 301 FKAKNTIFPR 310


>gb|ABK92443.1| unknown [Populus trichocarpa]
          Length = 320

 Score =  301 bits (772), Expect = 2e-79
 Identities = 147/310 (47%), Positives = 196/310 (63%), Gaps = 14/310 (4%)
 Frame = -3

Query: 889 GLDYWLQWQVFVCALIILIPVSIALNITIKRSKKEGGQQLKSCDLWLPCWKNVHPKWLLL 710
           GL YWL+WQV VCAL I+ P  ++  I IK++K    Q L   DLW P W+ ++P WLL 
Sbjct: 7   GLGYWLRWQVPVCALAIICPSLLSFYI-IKKAKT---QPLYIHDLWKPRWRCLNPLWLLC 62

Query: 709 YRVIAFSSMAFLLYQIXXXXXXXXXXFYTQWTFSLVMLYFAIGILVSARGCWKYSKKP-F 533
           YR  AF  ++ +LY+I          FYTQWTF L+M+YFA+G ++SA GCW   K+P  
Sbjct: 63  YRFFAFLCLSPMLYRIVYLDGAFAFYFYTQWTFMLIMIYFALGTVISAYGCWVSLKQPAV 122

Query: 532 AQDADTDIFIKKEHSDHGRESTTDINATQTKS-------------LIDQEAGALENLMQS 392
           ++  +  +F+K++  + G  + T I   + KS              I + AG    LMQ 
Sbjct: 123 SEHGENSVFLKRDVEEDG--TATSITYKEKKSGGTIKLRSHCAEEAIRERAGFWGYLMQI 180

Query: 391 IYHACGGAVMLTDLVFWFILLPLMSGKDFTLTMLIGLMHSVNVVLLFLDSAFNSHPYPWS 212
           IY  C GAV+LTD++FW I++P +S     L  L+G MHS+N V L LD+A NS P+PW 
Sbjct: 181 IYQTCAGAVILTDIIFWCIIVPFLSNTHLGLNALMGCMHSLNAVFLLLDTALNSLPFPWF 240

Query: 211 QFTYFVLWSGTYIVFQWTVHACGVTWWPYPFLELNTPWAPAWYFGLALFHIPCYGLYALL 32
           +  YFV WS  Y++FQW +HACG TWWPYPFL LNTPWAP WYF +A+ HIPCYG+YAL+
Sbjct: 241 RLAYFVQWSCLYVIFQWVIHACGFTWWPYPFLGLNTPWAPLWYFAMAVIHIPCYGIYALI 300

Query: 31  IKAKHFIFSR 2
            KAK+ IF R
Sbjct: 301 FKAKNTIFPR 310


>ref|XP_003536856.1| PREDICTED: uncharacterized protein LOC100775788 [Glycine max]
          Length = 407

 Score =  286 bits (731), Expect = 9e-75
 Identities = 141/309 (45%), Positives = 190/309 (61%), Gaps = 13/309 (4%)
 Frame = -3

Query: 889 GLDYWLQWQVFVCALIILIPVSIALNITIKRSKKEGGQQLKSCDLWLPCWKNVHPKWLLL 710
           G  YW +WQV VCALI+++ + I  ++ I ++K    Q      LWLPCW+ + P WL  
Sbjct: 97  GYKYWFRWQVPVCALILIVSI-ITASMQIVKAK---AQPFYHNHLWLPCWRKLSPVWLFF 152

Query: 709 YRVIAFSSMAFLLYQIXXXXXXXXXXFYTQWTFSLVMLYFAIGILVSARGCWKYSKKPFA 530
            R  AF  +A L + I          FYTQWTF+LVM+YFA+G ++SA GCW+Y  KP  
Sbjct: 153 SRAFAFLCLAHLHFDIIALDGAFSFYFYTQWTFTLVMIYFALGTIISAHGCWQYINKPPL 212

Query: 529 QDADTDIFIKKEHSDHGRESTTDI--NATQTKSLI-----------DQEAGALENLMQSI 389
           Q+ +   F++++      EST  I     +TKS I           +Q  G    LMQ  
Sbjct: 213 QNGEMAEFLRRDLE----ESTNSIAYREKETKSSIRLQSQYIQEEFNQRVGFWGYLMQIT 268

Query: 388 YHACGGAVMLTDLVFWFILLPLMSGKDFTLTMLIGLMHSVNVVLLFLDSAFNSHPYPWSQ 209
           Y    GA++LTD+VFW +++P +S   F L ML+  MHS+N V L LD+A N+ P+PW +
Sbjct: 269 YQTSAGAIILTDIVFWCVIVPFLSISHFKLNMLMVSMHSLNAVFLLLDTALNNLPFPWFR 328

Query: 208 FTYFVLWSGTYIVFQWTVHACGVTWWPYPFLELNTPWAPAWYFGLALFHIPCYGLYALLI 29
            +YFVLWS  YI+FQW +HA G TWWPYPFLELNTPWAP WY  LA+ HIP YG+Y+L++
Sbjct: 329 LSYFVLWSCGYIIFQWVIHAFGFTWWPYPFLELNTPWAPVWYLCLAVIHIPLYGMYSLIV 388

Query: 28  KAKHFIFSR 2
           KAK+ I  R
Sbjct: 389 KAKNTILPR 397


>ref|XP_004148580.1| PREDICTED: uncharacterized protein LOC101203588 [Cucumis sativus]
          Length = 313

 Score =  281 bits (720), Expect = 2e-73
 Identities = 140/299 (46%), Positives = 190/299 (63%), Gaps = 3/299 (1%)
 Frame = -3

Query: 889 GLDYWLQWQVFVCALIILIPVSIALNITIKRSKKEGGQQLKSCDLWLPCWKNVHPKWLLL 710
           G  YW++WQV VC LII IP + AL    K  +K   + L   DLW   W+++ P WLLL
Sbjct: 9   GWRYWVRWQVPVCGLIIAIPCAFAL----KFIRKSMAKPLLLSDLWSTHWRHLSPLWLLL 64

Query: 709 YRVIAFSSMAFLLYQIXXXXXXXXXXFYTQWTFSLVMLYFAIGILVSARGCWKYSKKPFA 530
           YR  AF     LLY+I          FYTQWT +LV +YFA+G +VSA G W  S+K  +
Sbjct: 65  YRAFAFVCCVQLLYEIVALHGPFVFFFYTQWTMALVAIYFALGTVVSAYGYWCPSRKTHS 124

Query: 529 Q-DADTDIFIK--KEHSDHGRESTTDINATQTKSLIDQEAGALENLMQSIYHACGGAVML 359
           + + D  +  K  K++ D  +E T  +     +    ++AG L  LMQ  Y A  GA +L
Sbjct: 125 KNEEDVKLMEKDLKKNVDIVKEDTIKVQNECAQQEFQEKAGCLGTLMQMAYLAAAGASVL 184

Query: 358 TDLVFWFILLPLMSGKDFTLTMLIGLMHSVNVVLLFLDSAFNSHPYPWSQFTYFVLWSGT 179
           TD+VFW +L+P + G++F +++LIG +H++N V L  D+A NS  +P+S F YFV + G 
Sbjct: 185 TDVVFWCLLVPFLLGENFQVSLLIGSIHALNAVFLLGDTAINSLSFPFSGFAYFVAFGGL 244

Query: 178 YIVFQWTVHACGVTWWPYPFLELNTPWAPAWYFGLALFHIPCYGLYALLIKAKHFIFSR 2
           Y+VFQWTVHAC V WWPYPF EL+TPWAP WY GLA+ HIPCYG+YAL++KAK+ +  R
Sbjct: 245 YVVFQWTVHACCVNWWPYPFFELSTPWAPLWYLGLAVIHIPCYGIYALIVKAKYSLLPR 303


>ref|XP_004163974.1| PREDICTED: uncharacterized protein LOC101228423 [Cucumis sativus]
          Length = 313

 Score =  279 bits (713), Expect = 1e-72
 Identities = 139/299 (46%), Positives = 189/299 (63%), Gaps = 3/299 (1%)
 Frame = -3

Query: 889 GLDYWLQWQVFVCALIILIPVSIALNITIKRSKKEGGQQLKSCDLWLPCWKNVHPKWLLL 710
           G  YW++WQV VC LII IP + AL    K  +K   + L   DLW   W+++ P WLLL
Sbjct: 9   GWRYWVRWQVPVCGLIIAIPCAFAL----KFIRKSMAKPLLLSDLWSTHWRHLSPLWLLL 64

Query: 709 YRVIAFSSMAFLLYQIXXXXXXXXXXFYTQWTFSLVMLYFAIGILVSARGCWKYSKKPFA 530
           YR  AF     LLY+I          FYTQWT +LV +YFA+G +VSA G W  S+K  +
Sbjct: 65  YRAFAFVCCVQLLYEIVALHGPFVFFFYTQWTMALVAIYFALGTVVSAYGYWCPSRKTHS 124

Query: 529 Q-DADTDIFIK--KEHSDHGRESTTDINATQTKSLIDQEAGALENLMQSIYHACGGAVML 359
           + + D  +  K  K++ D  +E T  +          ++AG L  LMQ  Y A  GA +L
Sbjct: 125 KNEEDVKLMEKDLKKNVDIVKEDTIKVQNECALQEFQEKAGCLGTLMQMAYLAAAGASVL 184

Query: 358 TDLVFWFILLPLMSGKDFTLTMLIGLMHSVNVVLLFLDSAFNSHPYPWSQFTYFVLWSGT 179
           TD+VFW +L+P + G++F +++LIG +H++N V L  D+A NS  +P+S F YFV + G 
Sbjct: 185 TDVVFWCLLVPFLLGENFQVSLLIGSIHALNAVFLLGDTAINSLSFPFSGFAYFVAFGGL 244

Query: 178 YIVFQWTVHACGVTWWPYPFLELNTPWAPAWYFGLALFHIPCYGLYALLIKAKHFIFSR 2
           Y+VF+WTVHAC V WWPYPF EL+TPWAP WY GLA+ HIPCYG+YAL++KAK+ +  R
Sbjct: 245 YVVFRWTVHACCVNWWPYPFFELSTPWAPLWYLGLAVIHIPCYGIYALIVKAKYSLLPR 303


Top