BLASTX nr result

ID: Bupleurum21_contig00001487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001487
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275796.1| PREDICTED: uncharacterized protein LOC100265...   138   2e-30
ref|XP_002305706.1| predicted protein [Populus trichocarpa] gi|2...   128   1e-27
gb|ACL51742.1| unknown [Pinus pinaster]                               126   7e-27
gb|ACJ70292.1| unknown [Pinus sylvestris]                             125   1e-26
ref|XP_002519688.1| conserved hypothetical protein [Ricinus comm...   124   2e-26

>ref|XP_002275796.1| PREDICTED: uncharacterized protein LOC100265752 [Vitis vinifera]
           gi|297740690|emb|CBI30872.3| unnamed protein product
           [Vitis vinifera]
          Length = 149

 Score =  138 bits (347), Expect = 2e-30
 Identities = 69/146 (47%), Positives = 105/146 (71%), Gaps = 1/146 (0%)
 Frame = +3

Query: 27  MTSQMMASNHDNAVVDIVTGKMAIKKKMSDIAKSAKLPLGLMPVDDVEELGYNPATGFFR 206
           M+SQ++A + +NA  ++ TG+   K+K  ++ +   LP GL+P++D+EE+GYN +TGF  
Sbjct: 1   MSSQVVAGHRENA--EVYTGEALCKQKSRELLEEICLPKGLLPLEDLEEVGYNRSTGFVW 58

Query: 207 AIRKIKLDHFFKRINRKVSFDTEVTCIFKEHRMTKITGVKSKEMMIWVSINDISIDKPES 386
             +K +  H F+RI R VS+DTEVT   ++ RM K+TGVKSKE++IWV+I+DI ID P S
Sbjct: 59  LKQKKRKQHKFQRIGRNVSYDTEVTAFVEKQRMKKLTGVKSKELLIWVTISDIYIDDPSS 118

Query: 387 GKIIF-KATAGVTRTFLISDFEEDET 461
           GKI F  +T G++R+F +S F+ DE+
Sbjct: 119 GKIAFGNSTTGISRSFPVSAFDLDES 144


>ref|XP_002305706.1| predicted protein [Populus trichocarpa] gi|222848670|gb|EEE86217.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score =  128 bits (322), Expect = 1e-27
 Identities = 64/144 (44%), Positives = 98/144 (68%)
 Frame = +3

Query: 27  MTSQMMASNHDNAVVDIVTGKMAIKKKMSDIAKSAKLPLGLMPVDDVEELGYNPATGFFR 206
           MTSQ +A++ + A  +I TG+   K+K  ++ +   LP+GL+P+DD+ E+GYN  TGF  
Sbjct: 1   MTSQHIATHREKA--EIHTGESLCKQKSLELLEEIHLPMGLLPLDDIVEVGYNRTTGFVW 58

Query: 207 AIRKIKLDHFFKRINRKVSFDTEVTCIFKEHRMTKITGVKSKEMMIWVSINDISIDKPES 386
             +K + DH F +I R+VS+DTEVT   +  RM ++TGVK+KE++ WVSI+DI +D+ + 
Sbjct: 59  LKQKKRKDHRFLKIGRQVSYDTEVTAFVENRRMRRLTGVKTKELLFWVSISDIYVDEKDL 118

Query: 387 GKIIFKATAGVTRTFLISDFEEDE 458
            KI F    G++RTF +S FE +E
Sbjct: 119 EKITFGNPTGISRTFPVSAFELEE 142


>gb|ACL51742.1| unknown [Pinus pinaster]
          Length = 145

 Score =  126 bits (316), Expect = 7e-27
 Identities = 59/140 (42%), Positives = 91/140 (65%)
 Frame = +3

Query: 39  MMASNHDNAVVDIVTGKMAIKKKMSDIAKSAKLPLGLMPVDDVEELGYNPATGFFRAIRK 218
           +  +N   +  +I  G    K+K  D+     LP GL+P++D+EE GY   TGF    +K
Sbjct: 2   LQVANDQRSGAEIFHGSEICKQKSMDLLAEMGLPKGLLPLEDLEESGYVKETGFVWLKQK 61

Query: 219 IKLDHFFKRINRKVSFDTEVTCIFKEHRMTKITGVKSKEMMIWVSINDISIDKPESGKII 398
            K +H+FK+I + V + TE+T   ++H+M K+TGVKSKE+++WV+I++ISID P SGKI 
Sbjct: 62  KKTEHYFKKIGKMVQYGTEITAYVEQHKMKKLTGVKSKELLLWVTISEISIDDPSSGKIY 121

Query: 399 FKATAGVTRTFLISDFEEDE 458
           FK+  G+ ++F  S FE +E
Sbjct: 122 FKSVTGIGKSFPTSAFEIEE 141


>gb|ACJ70292.1| unknown [Pinus sylvestris]
          Length = 145

 Score =  125 bits (314), Expect = 1e-26
 Identities = 59/140 (42%), Positives = 92/140 (65%)
 Frame = +3

Query: 39  MMASNHDNAVVDIVTGKMAIKKKMSDIAKSAKLPLGLMPVDDVEELGYNPATGFFRAIRK 218
           +  +N   +  +IV G    K+K  D+     LP GL+P++D+EE GY   TGF    +K
Sbjct: 2   LQVANDQRSGAEIVHGSEICKQKSMDLLAEMGLPKGLLPLEDLEESGYVKETGFVWLKQK 61

Query: 219 IKLDHFFKRINRKVSFDTEVTCIFKEHRMTKITGVKSKEMMIWVSINDISIDKPESGKII 398
            K +H+FK+I + V + TE+T   ++++M K+TGVKSKE+++WV+I++ISID P SGKI 
Sbjct: 62  KKTEHYFKKIGKMVQYGTEITAYVEQNKMKKLTGVKSKELLLWVTISEISIDDPSSGKIY 121

Query: 399 FKATAGVTRTFLISDFEEDE 458
           FK+  G+ ++F  S FE +E
Sbjct: 122 FKSVTGIGKSFPTSAFEIEE 141


>ref|XP_002519688.1| conserved hypothetical protein [Ricinus communis]
           gi|223541105|gb|EEF42661.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 145

 Score =  124 bits (312), Expect = 2e-26
 Identities = 61/144 (42%), Positives = 96/144 (66%)
 Frame = +3

Query: 27  MTSQMMASNHDNAVVDIVTGKMAIKKKMSDIAKSAKLPLGLMPVDDVEELGYNPATGFFR 206
           M SQ +A++ D A  +I  G+   K+K  ++ +  +LP GL+P+DD+ E+GYN  TGF  
Sbjct: 1   MASQRIANHRDEA--EIYLGESLCKQKSIELLEEIRLPKGLLPLDDIVEVGYNRTTGFVW 58

Query: 207 AIRKIKLDHFFKRINRKVSFDTEVTCIFKEHRMTKITGVKSKEMMIWVSINDISIDKPES 386
             +K   +H F+ I R V++DTEVT   ++ RM ++TGVKSKE++IWV+I+DI +D  ++
Sbjct: 59  LKQKNSKNHRFREIGRNVNYDTEVTAFVEDRRMKRLTGVKSKELLIWVTISDIYVDHNDN 118

Query: 387 GKIIFKATAGVTRTFLISDFEEDE 458
            KI F   +G++RTF +S F+  E
Sbjct: 119 SKITFGNPSGISRTFPVSAFQLQE 142


Top