BLASTX nr result

ID: Bupleurum21_contig00001485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00001485
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20706.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002309472.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
dbj|BAK61860.1| hypothetical protein [Citrus unshiu]                  111   7e-23
emb|CAN70428.1| hypothetical protein VITISV_037530 [Vitis vinifera]   110   2e-22
ref|XP_003588922.1| Ultraviolet-B-repressible protein [Medicago ...   106   2e-21

>emb|CBI20706.3| unnamed protein product [Vitis vinifera]
          Length = 123

 Score =  114 bits (286), Expect = 6e-24
 Identities = 68/122 (55%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
 Frame = +1

Query: 52  MASVSMAMPLT-ASQKTTLLPPTSGAFFKPLS---TKKTVSFNSNSKTKVVQIQASFKEK 219
           MASVSMAM LT ASQ   L  PTS AFF+PL    +KK V+    S+   ++++AS KEK
Sbjct: 1   MASVSMAMRLTSASQNRLLQRPTSEAFFQPLQVKPSKKAVAVKPKSRGSRLEVKASLKEK 60

Query: 220 AVTGXXXXXXXXSMVMPEXXXXXXXLTPSLNNFLLSIGAGGVVLIAILGAVVGVSNFDPV 399
           A+TG        SMV+PE       ++PSL NFLLSI AGGVVL AI+GAV+GV+NFDPV
Sbjct: 61  AITGLTAAALTASMVLPEAAEAASGVSPSLKNFLLSIVAGGVVLGAIVGAVIGVANFDPV 120

Query: 400 KR 405
           KR
Sbjct: 121 KR 122


>ref|XP_002309472.1| predicted protein [Populus trichocarpa] gi|222855448|gb|EEE92995.1|
           predicted protein [Populus trichocarpa]
          Length = 124

 Score =  113 bits (283), Expect = 1e-23
 Identities = 67/124 (54%), Positives = 85/124 (68%), Gaps = 5/124 (4%)
 Frame = +1

Query: 52  MASVSMAMPL-TASQKTTLLPPTSGAFFKPLSTKKTVSFNSNSKTKV---VQIQASFKEK 219
           MASVSMAMPL +ASQK    PP S +F KPL  + ++    ++K+K    +++QAS KEK
Sbjct: 1   MASVSMAMPLASASQKRLEQPPNSQSFLKPLPIRPSMEVGLSTKSKSRARLEVQASLKEK 60

Query: 220 AVTGXXXXXXXXSMVMPEXXXXXXX-LTPSLNNFLLSIGAGGVVLIAILGAVVGVSNFDP 396
           AVTG        SMV+PE        ++PSL NFLLSI AGGVV +AI+GAV+GVSNFDP
Sbjct: 61  AVTGLTAAALTASMVIPEVAEAAGPGISPSLKNFLLSIAAGGVVAVAIIGAVLGVSNFDP 120

Query: 397 VKRA 408
           VKR+
Sbjct: 121 VKRS 124


>dbj|BAK61860.1| hypothetical protein [Citrus unshiu]
          Length = 123

 Score =  111 bits (277), Expect = 7e-23
 Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
 Frame = +1

Query: 52  MASVSMAMPLTASQKTTLLPPTSGAFFKPLSTK--KTVSFNSNSKTKV-VQIQASFKEKA 222
           MASVSMAMPL+++ +  L+ P+S +F KPL  +  K   F    K++  +Q+QAS KEKA
Sbjct: 1   MASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKEKA 60

Query: 223 VTGXXXXXXXXSMVMPEXXXXXXX-LTPSLNNFLLSIGAGGVVLIAILGAVVGVSNFDPV 399
           VTG        SMV+PE        L+PSL NFLLSI AGGVVL A++GAV+GV+NFDPV
Sbjct: 61  VTGLTAAALTASMVIPEVAEAAGPGLSPSLKNFLLSIVAGGVVLAALVGAVIGVANFDPV 120

Query: 400 KR 405
           KR
Sbjct: 121 KR 122


>emb|CAN70428.1| hypothetical protein VITISV_037530 [Vitis vinifera]
          Length = 456

 Score =  110 bits (274), Expect = 2e-22
 Identities = 71/121 (58%), Positives = 80/121 (66%), Gaps = 4/121 (3%)
 Frame = -1

Query: 401 LTGSKLETPTTAPRMAIKTTPPAPMLSKKLLRDGVRLEAAEAASGITIEAVRAAAVSPVT 222
           LTGSKL TP TAP +A +TTPPA MLS+K LRDG   EAA AASG T+EAV AAAV PV 
Sbjct: 268 LTGSKLATPITAPTIAPRTTPPATMLSRKFLRDGEXPEAASAASGSTMEAVNAAAVRPVX 327

Query: 221 AFSLKEAWI*TTLVFEFELKDTVF---FVDKGLKNAPEVGGKRVVFWLA-VSGIAIETEA 54
           AFSL+EA+  + L  +F    T F   F   G K A EVG    +F LA VS IAIET A
Sbjct: 328 AFSLREAFTSSRLPLDFGFTATAFFDGFTCSGWKKASEVGLWSSLFXLAEVSRIAIETLA 387

Query: 53  I 51
           I
Sbjct: 388 I 388


>ref|XP_003588922.1| Ultraviolet-B-repressible protein [Medicago truncatula]
           gi|355477970|gb|AES59173.1| Ultraviolet-B-repressible
           protein [Medicago truncatula]
           gi|388515311|gb|AFK45717.1| unknown [Medicago
           truncatula]
          Length = 125

 Score =  106 bits (265), Expect = 2e-21
 Identities = 66/121 (54%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
 Frame = +1

Query: 55  ASVSMAMPLTASQKTTLLPPTSGAFFKPL---STKKTVSFNSNSKTKVVQIQASFKEKAV 225
           ASVSM++PLT +    L   +S  F KPL     KKT+   S SK+ VV IQAS K+K V
Sbjct: 4   ASVSMSLPLTQATHKNLHNSSSTPFLKPLPFPQAKKTLVNKSTSKSNVVGIQASLKDKTV 63

Query: 226 TGXXXXXXXXSMVMPEXXXXXXX-LTPSLNNFLLSIGAGGVVLIAILGAVVGVSNFDPVK 402
            G        SMV+P+         +PSL NFLLSI AGGVVL AILGAVVGVSNFDPVK
Sbjct: 64  KGLTAFALTASMVLPDVAHAAGNDFSPSLKNFLLSIAAGGVVLTAILGAVVGVSNFDPVK 123

Query: 403 R 405
           R
Sbjct: 124 R 124


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